PROSITE entry PS00249
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General information about the entry
Entry name [info] | PDGF_1 |
Accession [info] | PS00249 |
Entry type [info] | PATTERN |
Date [info] |
01-APR-1990 CREATED;
01-DEC-2004 DATA UPDATE; 03-MAY-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00222 |
Name and characterization of the entry
Description [info] | Platelet-derived growth factor (PDGF) family signature. |
Pattern [info] |
P-[PSR]-C-V-x(3)-R-C-[GSTA]-G-C-C. |
Numerical results [info]
Total number of hits | 63 in 63 different sequences |
Number of true positive hits | 63 in 63 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 10 |
Number of 'partial' sequences | 1 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 86.30 % |
Comments [info]
Taxonomic range [info] | Eukaryotes, Eukaryotic viruses |
Maximum number of repetitions [info] | 1 |
Site [info] | disulfide at position 3 |
Site [info] | disulfide at position 7 |
Site [info] | disulfide at position 10 |
Site [info] | disulfide at position 11 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
63 sequences
PDGFA_BOVIN (Q2KJ15 ), PDGFA_HUMAN (P04085 ), PDGFA_MOUSE (P20033 ), PDGFA_RABIT (P34007 ), PDGFA_RAT (P28576 ), PDGFA_XENLA (P13698 ), PDGFB_CANLF (Q6Q7I7 ), PDGFB_FELCA (P12919 ), PDGFB_HUMAN (P01127 ), PDGFB_MOUSE (P31240 ), PDGFB_RAT (Q05028 ), PDGFB_SHEEP (Q95229 ), PLGF_BOVIN (Q9XS47 ), PLGF_HUMAN (P49763 ), PLGF_MOUSE (P49764 ), PLGF_RAT (Q63434 ), TSIS_WMSV (P01128 ), TXVE1_SISCA (B0VXV3 ), TXVE2_MACLB (P82475 ), TXVE2_PROMU (Q330K6 ), TXVE_AGKPI (C0K3N2 ), TXVE_BITAR (C0K3N1 ), TXVE_BOTER (Q6J936 ), TXVE_BOTIN (Q90X24 ), TXVE_BOTJA (Q90X23 ), TXVE_CROAT (C0K3N3 ), TXVE_DABPA (P0DW97 ), TXVE_DABRR (P67861 ), TXVE_DABSI (P0DL42 ), TXVE_PROFL (P67862 ), TXVE_PROJR (P0DW98 ), TXVE_SISCA (B0VXV4 ), TXVE_VIPAA (P67863 ), TXVE_VIPAP (P83942 ), VEGFA_AGKPI (C0K3N4 ), VEGFA_BITGA (P83906 ), VEGFA_BOVIN (P15691 ), VEGFA_CANLF (Q9MYV3 ), VEGFA_CAVPO (P26617 ), VEGFA_CHICK (P67964 ), VEGFA_COTJA (P67965 ), VEGFA_HORSE (Q9GKR0 ), VEGFA_HUMAN (P15692 ), VEGFA_MESAU (Q99PS1 ), VEGFA_MOUSE (Q00731 ), VEGFA_PIG (P49151 ), VEGFA_PROFL (P67860 ), VEGFA_RAT (P16612 ), VEGFA_SHEEP (P50412 ), VEGFA_VIPAA (C0K3N5 ), VEGFB_BOVIN (Q9XS49 ), VEGFB_HUMAN (P49765 ), VEGFB_MOUSE (P49766 ), VEGFB_RAT (O35485 ), VEGFC_HUMAN (P49767 ), VEGFC_MOUSE (P97953 ), VEGFC_RAT (O35757 ), VEGFD_HUMAN (O43915 ), VEGFD_MOUSE (P97946 ), VEGFD_RAT (O35251 ), VEGFH_ORFN2 (P52584 ), VEGFH_ORFN7 (P52585 ), VGFAA_DANRE (O73682 )» more
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UniProtKB/Swiss-Prot False negative sequences |
10 sequences
PDGFC_CHICK (Q9I946 ), PDGFC_GEKJA (A8WCC4 ), PDGFC_HUMAN (Q9NRA1 ), PDGFC_MOUSE (Q8CI19 ), PDGFC_RAT (Q9EQX6 ), PDGFD_HUMAN (Q9GZP0 ), PDGFD_MOUSE (Q925I7 ), PDGFD_PONAB (Q5RA73 ), PDGFD_RABIT (Q6V9H4 ), PDGFD_RAT (Q9EQT1 )» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
PDGFB_PIG (P20034 ) |
PDB [Detailed view] |
65 PDB
1BJ1; 1CZ8; 1FLT; 1FZV; 1KAT; 1PDG; 1QTY; 1RV6; 1TZH; 1TZI; 1VPF; 1VPP; 1WQ8; 1WQ9; 2C7W; 2FJG; 2FJH; 2GNN; 2QR0; 2VPF; 2VWE; 2X1W; 2X1X; 2XAC; 2XV7; 3BDY; 3MJG; 3MJK; 3P9W; 3QTK; 3S1B; 3S1K; 3V2A; 3V6B; 4BSK; 4GLN; 4GLS; 4HQU; 4HQX; 4KZN; 4QAF; 4QCI; 4WPB; 4ZFF; 5FV1; 5FV2; 5HHC; 5HHD; 5O4E; 5T89; 6BFT; 6D3O; 6T9D; 6T9E; 6V7K; 6Z13; 6Z3F; 6ZBR; 6ZCD; 6ZFL; 7KEZ; 7KF0; 7KF1; 7LL8; 7LL9 » more |