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Entry: PS00276 |
Entry name [info] | CHANNEL_COLICIN |
Accession [info] | PS00276 |
Entry type [info] | PATTERN |
Date [info] |
01-APR-1990 CREATED;
01-APR-1990 DATA UPDATE; 10-FEB-2021 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00249 |
Description [info] | Channel forming colicins signature. |
Pattern [info] |
T-x(2)-W-x-P-[LIVMFY](3)-x(2)-E. |
Total number of hits | 16 in 16 different sequences |
Number of true positive hits | 11 in 11 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 5 in 5 different sequences |
Number of false negative sequences | 0 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 68.75 % |
Recall (true positives / (true positives + false negatives)) | 100.00 % |
Taxonomic range [info] | Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
UniProtKB/Swiss-Prot True positive sequences |
11 sequences
CE05_ECOLX (Q47500 ), CE10_ECOLX (Q47125 ), CEA1_ECOLX (P02978 ), CEA1_SHISO (P21178 ), CEAB_ECOLX (P05819 ), CEAK_ECOLX (Q47502 ), CEAN_ECOLX (P08083 ), CEA_CITFR (P04480 ), CEA_ECOLX (Q47108 ), CEIA_ECOLX (P06716 ), CEIB_ECOLX (P04479 )» more
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UniProtKB/Swiss-Prot False positive sequences |
5 sequences
DSC1_SCHPO (O43085 ), PK1L2_HUMAN (Q7Z442 ), PK1L2_MOUSE (Q7TN88 ), SRE31_CAEEL (O62266 ), SRE32_CAEEL (P90837 )» more |
PDB [Detailed view] |
5 PDB
1A87; 1CII; 1COL; 1RH1; 2I88 |