PROSITE entry PS00277
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General information about the entry
| Entry name [info] | STAPH_STREP_TOXIN_1 |
| Accession [info] | PS00277 |
| Entry type [info] | PATTERN |
| Date [info] |
01-APR-1990 CREATED;
01-APR-2006 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00250 |
Name and characterization of the entry
| Description [info] | Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin signature 1. |
| Pattern [info] |
Y-G-G-[LIV]-T-{I}-{N}-x(2)-N.
|
Numerical results [info]
| Total number of hits | 21 in 21 different sequences |
| Number of true positive hits | 17 in 17 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 4 in 4 different sequences |
| Number of false negative sequences | 30 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 80.95 % |
| Recall (true positives / (true positives + false negatives)) | 36.17 % |
Comments [info]
| Taxonomic range [info] | Bacteriophages, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 2 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
17 sequences
ENTC1_STAAU (P01553), ENTC2_STAAU (P34071), ENTC3_STAAM (P0A0L3), ENTC3_STAAN (P0A0L4), ENTC3_STAAU (P0A0L5), ETXA_STAAE (A0A0H3KHN8), ETXA_STAAU (P0A0L2), ETXA_STAAW (P0A0L1), ETXB_STAAU (P01552), ETXD_STAAU (P20723), ETXE_STAAU (P12993), SPEA_BPT12 (P0DJY8), SPEA_STRP8 (P62561), SPEA_STRPY (P0DJY7), SPEC_STRP1 (P0C0I5), SPEC_STRP6 (Q5XB82), SPEC_STRP8 (Q8NKX2)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
30 sequences
ETXG_STAAM (P0A0L6), ETXG_STAAN (P0A0L7), ETXG_STAAU (P0A0L8), ETXH_STAAU (P0A0M0), ETXH_STAAW (P0A0L9), SELX_STAA8 (Q2G107), SELX_STAAE (A0A0H3K6X4), SELX_STAAU (G0Z026), SLL11_STAAU (A8E1U5), SPEG_STRP1 (Q9X5C7), SPEG_STRP3 (P0DG08), SPEG_STRPQ (P0DG09), SPEH_STRP1 (P0C0I7), SPEH_STRPY (P0C0I6), SSL10_STAA8 (Q2G2X7), SSL10_STAAE (A0A0H3K6Z9), SSL11_STAA8 (Q2G0X4), SSL11_STAAE (A0A0H3KEE7), SSL13_STAAE (A0A0H3K7M3), SSL1_STAA8 (Q2G0X9), SSL1_STAAE (A0A0H3KAV3), SSL3_STAA8 (Q2G0X7), SSL3_STAAE (A0A0H3KEE1), SSL4_STAA8 (Q2G1S8), SSL4_STAAE (A0A0H3K6A3), SSL5_STAA8 (Q2G1S6), SSL5_STAAE (A0A0H3K6Z6), SSL7_STAA8 (Q2G2Y0), SSL7_STAAE (A0A0H3K6Z8), TSST_STAAU (P06886)» more |
| UniProtKB/Swiss-Prot False positive sequences |
4 sequences
AMPA_CORDI (Q6NG90), AMPA_COREF (Q8FNP8), AMPA_MYCLE (O32956), GPI18_EREGS (Q757K7)» more |
| PDB [Detailed view] |
66 PDB
1AN8; 1B1Z; 1CQV; 1D5M; 1D5X; 1D5Z; 1D6E; 1DYQ; 1ESF; 1FNU; 1FNV; 1FNW; 1GOZ; 1HA5; 1HQR; 1I4G; 1I4H; 1I4P; 1I4Q; 1I4R; 1I4X; 1JCK; 1JWM; 1JWS; 1JWU; 1KLG; 1KLU; 1KTK; 1L0X; 1L0Y; 1LO5; 1PYW; 1SBB; 1SE2; 1SE3; 1SE4; 1SEB; 1SJE; 1SJH; 1STE; 1SXT; 1T5X; 1UNS; 1UUP; 2AQ1; 2AQ2; 2AQ3; 2IPK; 2SEB; 3BVG; 3BVM; 3BVZ; 3BYT; 3BYY; 3BZD; 3GP7; 3R8B; 3SEB; 3W2D; 4C56; 4RGM; 4RGN; 4RGO; 4UDU; 5FK9; 5FKA » more |