We are deeply saddened by the passing of Amos Bairoch (1957–2025), the creator of PROSITE. We wish to dedicate our latest paper, published shortly before his death, to him. He will always be a source of inspiration to us.
Our deepest condolences go out to his family and friends, and to all those who had the privilege of working with him. Rest in peace, Amos. Your work will live on long after you are gone.
Our deepest condolences go out to his family and friends, and to all those who had the privilege of working with him. Rest in peace, Amos. Your work will live on long after you are gone.
PROSITE entry PS00292
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PURL: https://purl.expasy.org/prosite/signature/PS00292
Direct ScanProsite submission
General information about the entry
| Entry name [info] | CYCLINS |
| Accession [info] | PS00292 |
| Entry type [info] | PATTERN |
| Date [info] |
01-APR-1990 CREATED;
01-NOV-1995 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00264 |
Name and characterization of the entry
| Description [info] | Cyclins signature. |
| Pattern [info] |
R-x(2)-[LIVMSA]-x(2)-[FYWS]-[LIVM]-x(8)-[LIVMFC]-x(4)-[LIVMFYA]-x(2)- [STAGC]-[LIVMFYQ]-x-[LIVMFYC]-[LIVMFY]-D-[RKH]-[LIVMFYW]. |
Numerical results [info]
| Total number of hits | 179 in 179 different sequences |
| Number of true positive hits | 179 in 179 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 161 |
| Number of 'partial' sequences | 1 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 52.65 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes, Eukaryotic viruses |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
179 sequences
CCA11_ARATH (Q9C6Y3), CCA11_ORYSJ (Q7F830), CCA12_ARATH (Q9FVX0), CCA12_ORYSJ (Q0JPA4), CCA13_ORYSJ (Q0INT0), CCA14_ORYSJ (Q0DJR9), CCA21_ARATH (Q39071), CCA21_ORYSJ (Q2QQ96), CCA22_ARATH (Q147G5), CCA31_ARATH (Q9FMH5), CCA31_ORYSJ (Q75I54), CCA32_ORYSJ (Q2QN26), CCA33_ARATH (A0MEB5), CCA34_ARATH (Q3ECW2), CCB11_ARATH (P30183), CCB11_ORYSJ (Q0JIF2), CCB12_ARATH (Q39067), CCB13_ARATH (Q39069), CCB14_ARATH (O48790), CCB15_ARATH (Q39072), CCB15_ORYSJ (Q0DH40), CCB21_ARATH (Q39068), CCB21_ORYSI (Q01J96), CCB21_ORYSJ (Q7XSJ6), CCB22_ARATH (Q39070), CCB22_ORYSI (A2YH60), CCB22_ORYSJ (Q0D9C7), CCB23_ARATH (Q9LDM4), CCB24_ARATH (Q9SFW6), CCB31_ARATH (Q9SA32), CCD11_ARATH (P42751), CCD12_ORYSJ (Q8H339), CCD21_ARATH (P42752), CCD21_ORYSJ (Q0J233), CCD22_ORYSJ (Q8LHA8), CCD23_ORYSJ (Q10K98), CCD31_ARATH (P42753), CCD31_ORYSJ (Q69QB8), CCD32_ARATH (Q9FGQ7), CCD33_ARATH (Q9SN11), CCD41_ARATH (Q8LGA1), CCD41_ORYSJ (Q6YXH8), CCD42_ARATH (Q0WQN9), CCD42_ORYSJ (Q4KYM5), CCD52_ORYSJ (Q2QMW1), CCF21_ORYSJ (Q6K1Z6), CCF22_ORYSJ (Q6K8S0), CCF31_ORYSJ (Q10Q63), CCF32_ORYSJ (Q10Q62), CCN1_ANTMA (P34800), CCN2_ANTMA (P34801), CCNA1_CARAU (Q92161), CCNA1_HUMAN (P78396), CCNA1_MOUSE (Q61456), CCNA1_RAT (Q6AY13), CCNA1_XENLA (P18606), CCNA2_BOVIN (P30274), CCNA2_CHICK (P43449), CCNA2_HUMAN (P20248), CCNA2_MESAU (P37881), CCNA2_MOUSE (P51943), CCNA2_XENLA (P47827), CCNAL_DAUCA (P25010), CCNA_DROME (P14785), CCNA_HYDVD (P51986), CCNA_PATVU (P24861), CCNA_SPISO (P04962), CCNB1_ANGJA (Q60FY0), CCNB1_BOVIN (Q1LZG6), CCNB1_CAEEL (Q10653), CCNB1_CARAU (Q92162), CCNB1_CRIGR (Q08301), CCNB1_HUMAN (P14635), CCNB1_MEDSV (P46277), CCNB1_MESAU (P37882), CCNB1_MOUSE (P24860), CCNB1_ORYCU (Q9DGA4), CCNB1_ORYJA (Q9DGA0), CCNB1_ORYLA (Q9IBG1), CCNB1_ORYLU (Q9DG97), CCNB1_RAT (P30277), CCNB1_SOYBN (P25011), CCNB1_XENLA (P13350), CCNB2_ANGJA (Q60FX9), CCNB2_BOVIN (O77689), CCNB2_CHICK (P29332), CCNB2_HUMAN (O95067), CCNB2_MACFA (Q4R7A8), CCNB2_MEDSA (P30278), CCNB2_MEDSV (P46278), CCNB2_MESAU (P37883), CCNB2_MOUSE (P30276), CCNB2_ORYJA (Q9DG99), CCNB2_ORYLA (Q9IBG0), CCNB2_ORYLU (Q9DG96), CCNB2_RANJA (O93229), CCNB2_SOYBN (P25012), CCNB2_XENLA (P13351), CCNB3_CANLF (Q659K0), CCNB3_CHICK (P39963), CCNB_ARBPU (P07818), CCNB_DICDI (P42524), CCNB_DROME (P20439), CCNB_HYDVD (P51987), CCNB_HYDVU (P51988), CCNB_MARGL (P15206), CCNB_PATPE (P18063), CCNB_PATVU (P24862), CCNB_SPISO (P13952), CCND1_BOVIN (Q2KI22), CCND1_CHICK (P55169), CCND1_DANRE (Q90459), CCND1_HUMAN (P24385), CCND1_MOUSE (P25322), CCND1_PONAB (Q5R6J5), CCND1_RAT (P39948), CCND1_XENLA (P50755), CCND2_BOVIN (Q0P5D3), CCND2_CHICK (P49706), CCND2_HUMAN (P30279), CCND2_MOUSE (P30280), CCND2_PIG (Q8WNW2), CCND2_RAT (Q04827), CCND2_XENLA (P53782), CCND3_BOVIN (Q3MHH5), CCND3_HUMAN (P30281), CCND3_MOUSE (P30282), CCND3_RAT (P48961), CCND_CAEEL (Q9U2M5), CCNE1_CHICK (P49707), CCNE1_DANRE (P47794), CCNE1_HUMAN (P24864), CCNE1_MOUSE (Q61457), CCNE1_RAT (P39949), CCNE1_XENLA (P50756), CCNE2_BOVIN (Q5E9K7), CCNE2_HUMAN (O96020), CCNE2_MOUSE (Q9Z238), CCNE2_XENLA (Q91780), CCNE3_XENLA (O42575), CCNE_CAEEL (O01501), CCNE_DROME (P54733), CCNF_BOVIN (A5PK16), CCNF_DANRE (Q6NYX6), CCNF_HUMAN (P41002), CCNF_MOUSE (P51944), CCNF_RAT(Q8K4F8), CCNF_XENLA (Q7T0L6), CCNF_XENTR (Q5XGG5), CCNOA_XENLA (Q32NJ2), CCNOB_XENLA (Q32NM1), CCSDS_ARATH (Q1PFW3), CCSDS_ORYSJ (Q10PQ9), CG11_CANAL (Q59YH3), CG11_CANAW (C4YR54), CG11_CANAX (P0CY18), CG11_YEAST (P20437), CG12_CANAX (P43062), CG12_YEAST (P20438), CG13_CANAL (Q5A1N6), CG13_YEAST (P13365), CG1_COLGL (Q06374), CG21_CANAL (Q5ALY0), CG21_CANAX (P47829), CG21_EMENI (P30284), CG21_SCHPO (P24865), CG21_YEAST (P24868), CG22_SCHPO (P36630), CG22_YEAST (P24869), CG23_SCHPO (P10815), CG23_YEAST (P24870), CG24_CANAL (Q5A0A9), CG24_YEAST (P24871), CGH2_SHV21 (Q01043), CGS5_YEAST (P30283), CGS6_YEAST (P32943), HGC1_CANAL (Q5ABE2), REM1_SCHPO (O14332), VCYCL_HHV8P (Q77Q36)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
161 sequences
CCA23_ARATH (Q38819), CCA24_ARATH (Q9C968), CCA32_ARATH (Q9C6A9), CCB12_ORYSJ (Q0DWQ7), CCB13_ORYSJ (Q0JNK6), CCB25_ARATH (Q9LM91), CCC11_ARATH (Q9FJK6), CCC11_ORYSJ (P93411), CCC12_ARATH (Q9FJK7), CCD11_ORYSJ (Q67V81), CCD32_ORYSJ (Q0J3H7), CCD51_ARATH (Q2V3B2), CCD51_ORYSJ (Q0DQA9), CCD53_ORYSJ (Q10QA2), CCD61_ARATH (Q9ZR04), CCD61_ORYSJ (Q69S43), CCD71_ARATH (Q9LZM0), CCD71_ORYSJ (Q53MB7), CCF11_ORYSJ (Q6K1Z1), CCF12_ORYSJ (Q6K8S5), CCF13_ORYSJ (Q6K8S1), CCF14_ORYSJ (Q6K8S3), CCH11_ARATH (Q8W5S1), CCH11_ORYSJ (Q10D80), CCJ18_ARATH (Q9C5X2), CCL11_ARATH (Q8RWV3), CCL11_ORYSJ (Q9AS36), CCL1_YEAST (P37366), CCN1_TRYBB (P41179), CCNA1_CAEEL (P34638), CCNB3_CAEEL (Q10654), CCNB3_DROME (Q9I7I0), CCNB3_HUMAN (Q8WWL7), CCNB3_MOUSE (Q810T2), CCNC_AEDAE (Q16JA2), CCNC_ANOGA (Q7QB13), CCNC_BOVIN (Q3ZCK5), CCNC_CAEBR (P0C654), CCNC_CAEEL (Q9TYP2), CCNC_CHICK (P55168), CCNC_DICDI (Q86KE7), CCNC_DROME (P25008), CCNC_DROPS (Q29AI1), CCNC_HUMAN (P24863), CCNC_MOUSE (Q62447), CCNC_RAT(P39947), CCNC_XENLA (Q4KLA0), CCNC_XENTR (Q28F72), CCND_OSTTA (Q5SCB5), CCNE_HEMPU (O15995), CCNG1_BOVIN (Q5E9I1), CCNG1_HUMAN (P51959), CCNG1_MOUSE (P51945), CCNG1_PIG (Q52QT8), CCNG1_PONAB (Q5R5D0), CCNG1_RAT (P39950), CCNH_BOVIN (Q3ZBL9), CCNH_ECHMU (Q9GP34), CCNH_HUMAN (P51946), CCNH_MACFA (Q4R7U4), CCNH_MOUSE (Q61458), CCNH_RAT(Q9R1A0), CCNH_XENLA (P51947), CCNI2_HUMAN (Q6ZMN8), CCNI_HUMAN (Q14094), CCNI_MOUSE (Q9Z2V9), CCNJL_HUMAN (Q8IV13), CCNJL_MOUSE (Q5SRT8), CCNJ_HUMAN (Q5T5M9), CCNJ_MOUSE (Q3TZI6), CCNJ_XENLA (Q6DFJ9), CCNK_HUMAN (O75909), CCNK_MOUSE (O88874), CCNL1_CHICK (Q5ZJP9), CCNL1_DANRE (Q7ZVX0), CCNL1_HUMAN (Q9UK58), CCNL1_MOUSE (Q52KE7), CCNL1_PONAB (Q5RD50), CCNL1_RAT (Q9R1Q2), CCNL1_XENLA (Q6GN15), CCNL2_HUMAN (Q96S94), CCNL2_MOUSE (Q9JJA7), CCNL2_RAT (Q5I0H5), CCNL2_XENTR (Q5BKF8), CCNO_HUMAN (P22674), CCNO_MOUSE (P0C242), CCNQ_DANRE (Q503D6), CCNQ_HUMAN (Q8N1B3), CCNQ_MOUSE (Q8QZR8), CCNQ_RAT(Q4QQW5), CCNQ_XENLA (Q6NRK9), CCNT1_HORSE (Q9XT26), CCNT1_HUMAN (O60563), CCNT1_MOUSE (Q9QWV9), CCNT1_PANTR (Q8HXN7), CCNT2_HUMAN (O60583), CCNY_CAEEL (P34624), CCNY_HUMAN (Q8ND76), CCNY_MOUSE (Q8BGU5), CCP11_ORYSJ (Q0J9W0), CCP21_ORYSJ (Q7FAT5), CCP31_ORYSJ (Q75HV0), CCP41_ORYSJ (Q7XC35), CCT11_ARATH (Q9C8P7), CCT11_ORYSJ (Q0E474), CCT12_ARATH (Q56YF8), CCT12_ORYSJ (Q6Z7H3), CCT13_ARATH (Q8LBC0), CCT13_ORYSJ (Q2RAC5), CCT14_ARATH (Q8GYM6), CCT14_ORYSJ (Q2QQS5), CCT15_ARATH (Q9FKE6), CCU11_ARATH (Q9LJ45), CCU21_ARATH (Q9SHD3), CCU22_ARATH (Q9M205), CCU31_ARATH (Q8LB60), CCU41_ARATH (O80513), CCU42_ARATH (Q9LY16), CCU43_ARATH (Q9FKF6), CCY1A_XENLA (Q5U5D0), CCY1B_XENLA (Q6NRF4), CCYL1_DANRE (Q08CI4), CCYL1_HUMAN (Q8N7R7), CCYL1_MOUSE (D3YUJ3), CCYL1_XENTR (Q28EL0), CGM2_SCHPO (P36613), CGP1_SCHPO (P87049), CLG1_YEAST (P35190), CTK2_YEAST (P46962), PCL10_YEAST (P53124), PCL1_YEAST (P24867), PCL2_YEAST (P25693), PCL5_YEAST (P38794), PCL6_YEAST (P40038), PCL7_YEAST (P40186), PCL8_YEAST (Q08966), PCL9_YEAST (Q12477), PHO80_YEAST (P20052), PREG_NEUCR (Q06712), PSL1_SCHPO (O42979), PUC1_SCHPO (P25009), SRB11_SCHPO (O94503), SSN8_ASPCL (A1C7R6), SSN8_ASPFU (Q4WZT9), SSN8_ASPOR (Q2UDB2), SSN8_ASPTN (Q0CV29), SSN8_CANAL (Q5A4H9), SSN8_CANGA (Q6FJE8), SSN8_CHAGB (Q2GVK1), SSN8_COCIM (Q1EAW8), SSN8_DEBHA (Q6BYF8), SSN8_EMENI (Q5BBA8), SSN8_EREGS (Q75AX7), SSN8_GIBMO (Q9C1M4), SSN8_KLULA (Q6CP20), SSN8_MYCMD (Q4P101), SSN8_NEUCR (Q9HE63), SSN8_PICST (A3LPX1), SSN8_PYRO7 (A4RD79), SSN8_YARLI (Q6CAC7), SSN8_YEAST (P47821)» more |
| UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
CCNB1_MEDSA (P30286) |
| PDB [Detailed view] |
163 PDB
pdb_00001bu2; pdb_00001e9h; pdb_00001fin; pdb_00001fvv; pdb_00001gy3; pdb_00001h1p; pdb_00001h1q; pdb_00001h1r; pdb_00001h1s; pdb_00001h24; pdb_00001h25; pdb_00001h26; pdb_00001h27; pdb_00001h28; pdb_00001jow; pdb_00001jst; pdb_00001jsu; pdb_00001ogu; pdb_00001oi9; pdb_00001oiu; pdb_00001oiy; pdb_00001okv; pdb_00001okw; pdb_00001ol1; pdb_00001ol2; pdb_00001p5e; pdb_00001pkd; pdb_00001qmz; pdb_00001urc; pdb_00001vin; pdb_00001vyw; pdb_00001w98; pdb_00001xo2; pdb_00002b9r; pdb_00002bkz; pdb_00002bpm; pdb_00002c4g; pdb_00002c5n; pdb_00002c5o; pdb_00002c5v; pdb_00002c5x; pdb_00002c6t; pdb_00002cch; pdb_00002cci; pdb_00002cjm; pdb_00002euf; pdb_00002f2c; pdb_00002g9x; pdb_00002i40; pdb_00002iw6; pdb_00002iw8; pdb_00002iw9; pdb_00002jgz; pdb_00002uue; pdb_00002uzb; pdb_00002uzd; pdb_00002uze; pdb_00002uzl; pdb_00002v22; pdb_00002w96; pdb_00002w99; pdb_00002w9f; pdb_00002w9z; pdb_00002wev; pdb_00002wfy; pdb_00002whb; pdb_00002wih; pdb_00002wip; pdb_00002wma; pdb_00002wmb; pdb_00002wpa; pdb_00002wxv; pdb_00002x1n; pdb_00003bht; pdb_00003bhu; pdb_00003bhv; pdb_00003ddp; pdb_00003ddq; pdb_00003dog; pdb_00003eid; pdb_00003ej1; pdb_00003eoc; pdb_00003f5x; pdb_00003g33; pdb_00003my5; pdb_00003qhr; pdb_00003qhw; pdb_00003tnw; pdb_00004bck; pdb_00004bcm; pdb_00004bcn; pdb_00004bco; pdb_00004bcp; pdb_00004bcq; pdb_00004cfm; pdb_00004cfn; pdb_00004cfu; pdb_00004cfv; pdb_00004cfw; pdb_00004cfx; pdb_00004eoi; pdb_00004eoj; pdb_00004eok; pdb_00004eol; pdb_00004eom; pdb_00004eon; pdb_00004eoo; pdb_00004eop; pdb_00004eoq; pdb_00004eor; pdb_00004eos; pdb_00004fx3; pdb_00004i3z; pdb_00004ii5; pdb_00004tth; pdb_00004y72; pdb_00004yc3; pdb_00005cyi; pdb_00005hq0; pdb_00005if1; pdb_00005l2w; pdb_00005lmk; pdb_00005lqf; pdb_00005nev; pdb_00006ath; pdb_00006gu2; pdb_00006gu3; pdb_00006gu4; pdb_00006gub; pdb_00006guc; pdb_00006gue; pdb_00006guf; pdb_00006gva; pdb_00006p3w; pdb_00006p8e; pdb_00006p8f; pdb_00006p8g; pdb_00006p8h; pdb_00006q6g; pdb_00006q6h; pdb_00006rij; pdb_00006sg4; pdb_00007ack; pdb_00007b5l; pdb_00007b5r; pdb_00007b7s; pdb_00007kjs; pdb_00007luo; pdb_00007mkx; pdb_00007nj0; pdb_00007qhl; pdb_00007sj3; pdb_00007xqk; pdb_00008b54; pdb_00008bya; pdb_00008bzo; pdb_00008h4r; pdb_00008h6p; pdb_00008h6t; pdb_00008roz; pdb_00008vq3; pdb_00008vq4; pdb_00009cb3 » more |