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Entry: PS00293

General information about the entry

Entry name [info] PCNA_2
Accession [info] PS00293
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED;
01-JUL-1998 DATA UPDATE;
11-DEC-2019 INFO UPDATE.
PROSITE Doc. [info] PDOC00265

Name and characterization of the entry

Description [info] Proliferating cell nuclear antigen signature 2.
Pattern [info] 
[RKA]-C-[DE]-[RH]-x(3)-[LIVMF]-x(3)-[LIVM]-x-[SGAN]-[LIVMF]-x-K-
[LIVMF](2).

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2019_11 which contains 561'568 sequence entries.


Total number of hits 35 in 35 different sequences
Number of true positive hits 35 in 35 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 63
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 35.71 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Eukaryotic viruses
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 35 sequences 

PCNA1_ARATH (Q9M7Q7    ), PCNA1_DAUCA (Q00268    ), PCNA1_PBCV1 (Q84513    ), 

PCNA2_ARATH (Q9ZW35    ), PCNA2_DAUCA (Q00265    ), PCNA_ANGJA  (Q9W644    ), 
PCNA_BOMMO  (O01377    ), PCNA_BOVIN  (Q3ZBW4    ), PCNA_BRANA  (Q43124    ), 
PCNA_CATRO  (P24314    ), PCNA_CHICK  (Q9DEA3    ), PCNA_COTJA  (Q9DDF1    ), 
PCNA_CRIGR  (P57761    ), PCNA_DANRE  (Q9PTP1    ), PCNA_DROME  (P17917    ), 
PCNA_HAPBU  (Q6B6N4    ), PCNA_HUMAN  (P12004    ), PCNA_MACFA  (P61258    ), 
PCNA_MAIZE  (Q43266    ), PCNA_MOUSE  (P17918    ), PCNA_NPVAC  (P11038    ), 
PCNA_NPVOP  (O10308    ), PCNA_ORYSJ  (P17070    ), PCNA_PEA    (O82134    ), 
PCNA_PLAF7  (P61074    ), PCNA_PLAFK  (P31008    ), PCNA_POPNI  (Q9MAY3    ), 
PCNA_RAT    (P04961    ), PCNA_SARCR  (O16852    ), PCNA_SCHPO  (Q03392    ), 
PCNA_SOYBN  (P22177    ), PCNA_STYCL  (P53358    ), PCNA_TOBAC  (O82797    ), 
PCNA_XENLA  (P18248    ), PCNA_YEAST  (P15873    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 63 sequences 

PCNA1_AERPE (Q9YFT8    ), PCNA1_PYRAE (Q8ZTY0    ), PCNA1_SACS2 (P57766    ), 

PCNA1_SULAC (Q4JAI6    ), PCNA1_SULOH (P57762    ), PCNA1_SULTO (Q975N2    ), 
PCNA1_THEKO (Q5JF32    ), PCNA2_AERPE (Q9Y9V7    ), PCNA2_PBCV1 (O41056    ), 
PCNA2_PYRAE (Q8ZYL6    ), PCNA2_SACS2 (Q97Z84    ), PCNA2_SULAC (Q4J9A8    ), 
PCNA2_SULOH (P57763    ), PCNA2_SULTO (Q975M2    ), PCNA2_THEKO (Q5JFD3    ), 
PCNA3_AERPE (Q9YEZ5    ), PCNA3_SACS2 (P57765    ), PCNA3_SULTO (Q973F5    ), 
PCNA_ARCFU  (O29912    ), PCNA_CAEEL  (O02115    ), PCNA_CENSY  (A0RXH7    ), 
PCNA_HALLT  (B9LU30    ), PCNA_HALMA  (Q9P9H8    ), PCNA_HALS3  (B0R7F7    ), 
PCNA_HALSA  (Q9HN45    ), PCNA_HALWD  (Q18E60    ), PCNA_META3  (A6UUW0    ), 
PCNA_METAC  (Q8TUF7    ), PCNA_METAR  (Q0W2J4    ), PCNA_METB6  (A7I849    ), 
PCNA_METBF  (Q46E39    ), PCNA_METBU  (Q12U18    ), PCNA_METHJ  (Q2FNX1    ), 
PCNA_METJA  (Q57697    ), PCNA_METKA  (Q8TWK3    ), PCNA_METLZ  (A2SSW6    ), 
PCNA_METM5  (A4G0K8    ), PCNA_METM6  (A9A8V2    ), PCNA_METM7  (A6VHX7    ), 
PCNA_METMA  (Q8PX25    ), PCNA_METMJ  (A3CVJ2    ), PCNA_METMP  (Q6LWJ8    ), 
PCNA_METPE  (B8GG80    ), PCNA_METS3  (A5UMB4    ), PCNA_METST  (Q2NE55    ), 
PCNA_METTH  (O27367    ), PCNA_METTP  (A0B7Y8    ), PCNA_METVS  (A6UQZ4    ), 
PCNA_MIMIV  (Q7T6Y0    ), PCNA_NANEQ  (Q74MV1    ), PCNA_NATPD  (Q3IU15    ), 
PCNA_NITMS  (A9A2X4    ), PCNA_PICTO  (Q6KZF1    ), PCNA_PYRAB  (Q9UYX8    ), 
PCNA_PYRFU  (O73947    ), PCNA_PYRHO  (O58398    ), PCNA_THEAC  (Q9HJQ0    ), 
PCNA_THEFM  (Q9UWR9    ), PCNA_THEGJ  (C5A5N6    ), PCNA_THEON  (B6YVZ1    ), 
PCNA_THEPD  (A1RXU8    ), PCNA_THESM  (C6A1Y5    ), PCNA_THEVO  (Q979S2    )
» more

PDB
[Detailed view]		 69 PDB

1AXC; 1PLQ; 1PLR; 1SXJ; 1U76; 1U7B; 1UL1; 1VYJ; 1VYM; 1W60; 2OD8; 2ZVK; 2ZVL; 2ZVM; 2ZVV; 2ZVW; 3F1W; 3GPM; 3GPN; 3JA9; 3L0W; 3L0X; 3L10; 3P87; 3PGE; 3TBL; 3V60; 3V61; 3V62; 3VKX; 3WGW; 4D2G; 4HK1; 4L60; 4L6P; 4RJF; 4YHR; 4ZTD; 5E0T; 5E0U; 5E0V; 5IY4; 5MAV; 5MLO; 5MLW; 5MOM; 5T9D; 5V7K; 5V7M; 5YCO; 5YD8; 5ZUT; 6CBI; 6CX2; 6CX3; 6CX4; 6D0Q; 6D0R; 6E49; 6EHT; 6FCM; 6FCN; 6GIS; 6GWS; 6HVO; 6K3A; 6O09; 6QC0; 6QCG
» more

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