PROSITE entry PS00293
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PURL: https://purl.expasy.org/prosite/signature/PS00293
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General information about the entry
| Entry name [info] | PCNA_2 |
| Accession [info] | PS00293 |
| Entry type [info] | PATTERN |
| Date [info] |
01-APR-1990 CREATED;
01-JUL-1998 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00265 |
Name and characterization of the entry
| Description [info] | Proliferating cell nuclear antigen signature 2. |
| Pattern [info] |
[RKA]-C-[DE]-[RH]-x(3)-[LIVMF]-x(3)-[LIVM]-x-[SGAN]-[LIVMF]-x-K- [LIVMF](2). |
Numerical results [info]
| Total number of hits | 36 in 36 different sequences |
| Number of true positive hits | 36 in 36 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 63 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 36.36 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Eukaryotic viruses |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
36 sequences
PCNA1_ARATH (Q9M7Q7), PCNA1_DAUCA (Q00268), PCNA1_PBCV1 (Q84513), PCNA1_PLAF7 (P61074), PCNA1_PLAFK (P31008), PCNA2_ARATH (Q9ZW35), PCNA2_DAUCA (Q00265), PCNA_ANGJA (Q9W644), PCNA_BOMMO (O01377), PCNA_BOVIN (Q3ZBW4), PCNA_BRANA (Q43124), PCNA_CATRO (P24314), PCNA_CHATD (G0SF70), PCNA_CHICK (Q9DEA3), PCNA_COTJA (Q9DDF1), PCNA_CRIGR (P57761), PCNA_DANRE (Q9PTP1), PCNA_DROME (P17917), PCNA_HAPBU (Q6B6N4), PCNA_HUMAN (P12004), PCNA_MACFA (P61258), PCNA_MAIZE (Q43266), PCNA_MOUSE (P17918), PCNA_NPVAC (P11038), PCNA_NPVOP (O10308), PCNA_ORYSJ (P17070), PCNA_PEA(O82134), PCNA_POPNI (Q9MAY3), PCNA_RAT(P04961), PCNA_SARCR (O16852), PCNA_SCHPO (Q03392), PCNA_SOYBN (P22177), PCNA_STYCL (P53358), PCNA_TOBAC (O82797), PCNA_XENLA (P18248), PCNA_YEAST (P15873)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
63 sequences
PCNA1_AERPE (Q9YFT8), PCNA1_PYRAE (Q8ZTY0), PCNA1_SACS2 (P57766), PCNA1_SULAC (Q4JAI6), PCNA1_SULOH (P57762), PCNA1_SULTO (Q975N2), PCNA1_THEKO (Q5JF32), PCNA2_AERPE (Q9Y9V7), PCNA2_PBCV1 (O41056), PCNA2_PYRAE (Q8ZYL6), PCNA2_SACS2 (Q97Z84), PCNA2_SULAC (Q4J9A8), PCNA2_SULOH (P57763), PCNA2_SULTO (Q975M2), PCNA2_THEKO (Q5JFD3), PCNA3_AERPE (Q9YEZ5), PCNA3_SACS2 (P57765), PCNA3_SULTO (Q973F5), PCNA_ARCFU (O29912), PCNA_CAEEL (O02115), PCNA_CENSY (A0RXH7), PCNA_HALLT (B9LU30), PCNA_HALMA (Q9P9H8), PCNA_HALS3 (B0R7F7), PCNA_HALSA (Q9HN45), PCNA_HALWD (Q18E60), PCNA_META3 (A6UUW0), PCNA_METAC (Q8TUF7), PCNA_METAR (Q0W2J4), PCNA_METB6 (A7I849), PCNA_METBF (Q46E39), PCNA_METBU (Q12U18), PCNA_METHJ (Q2FNX1), PCNA_METJA (Q57697), PCNA_METKA (Q8TWK3), PCNA_METLZ (A2SSW6), PCNA_METM5 (A4G0K8), PCNA_METM6 (A9A8V2), PCNA_METM7 (A6VHX7), PCNA_METMA (Q8PX25), PCNA_METMJ (A3CVJ2), PCNA_METMP (Q6LWJ8), PCNA_METPE (B8GG80), PCNA_METS3 (A5UMB4), PCNA_METST (Q2NE55), PCNA_METTH (O27367), PCNA_METTP (A0B7Y8), PCNA_METVS (A6UQZ4), PCNA_MIMIV (Q7T6Y0), PCNA_NANEQ (Q74MV1), PCNA_NATPD (Q3IU15), PCNA_NITMS (A9A2X4), PCNA_PICTO (Q6KZF1), PCNA_PYRAB (Q9UYX8), PCNA_PYRFU (O73947), PCNA_PYRHO (O58398), PCNA_THEAC (Q9HJQ0), PCNA_THEFM (Q9UWR9), PCNA_THEGJ (C5A5N6), PCNA_THEON (B6YVZ1), PCNA_THEPD (A1RXU8), PCNA_THESM (C6A1Y5), PCNA_THEVO (Q979S2)» more |
| PDB [Detailed view] |
159 PDB
1AXC; 1PLQ; 1PLR; 1SXJ; 1U76; 1U7B; 1UL1; 1VYJ; 1VYM; 1W60; 2OD8; 2ZVK; 2ZVL; 2ZVM; 2ZVV; 2ZVW; 3F1W; 3GPM; 3GPN; 3JA9; 3L0W; 3L0X; 3L10; 3P87; 3PGE; 3TBL; 3V60; 3V61; 3V62; 3VKX; 3WGW; 4D2G; 4HK1; 4L60; 4L6P; 4RJF; 4YHR; 4ZTD; 5E0T; 5E0U; 5E0V; 5IY4; 5MAV; 5MLO; 5MLW; 5MOM; 5T9D; 5V7K; 5V7M; 5YCO; 5YD8; 5ZUT; 6CBI; 6CX2; 6CX3; 6CX4; 6D0Q; 6D0R; 6E49; 6EHT; 6FCM; 6FCN; 6GIS; 6GWS; 6HVO; 6K3A; 6O09; 6QC0; 6QCG; 6QH1; 6S1M; 6S1N; 6S1O; 6TNY; 6TNZ; 6VVO; 6W9W; 6WAC; 7EFA; 7KC0; 7KQ0; 7KQ1; 7M5L; 7M5M; 7M5N; 7NV0; 7NV1; 7O1E; 7O1F; 7QNZ; 7QO1; 7TFH; 7TFI; 7TFJ; 7THJ; 7THV; 7TI8; 7TIB; 7TIC; 7TID; 7TKU; 7U19; 7U1A; 7U1P; 8B8T; 8COB; 8DQX; 8DQZ; 8DR0; 8DR1; 8DR3; 8DR4; 8DR5; 8DR6; 8DR7; 8E84; 8F5Q; 8GCJ; 8GL9; 8GLA; 8P9O; 8Q7I; 8THC; 8THD; 8THW; 8TW7; 8TW8; 8TWA; 8TWB; 8UI7; 8UI8; 8UI9; 8UII; 8UMT; 8UMU; 8UMV; 8UMW; 8UMY; 8UN0; 8YJH; 8YJL; 8YJQ; 8YJR; 8YJS; 8YJU; 8YJV; 8YJW; 8YJZ; 9B8S; 9B8T; 9CG4; 9CHM; 9CL7; 9CMA; 9EOA; 9F6D; 9F6E; 9F6F; 9GY0 » more |