PROSITE entry PS00293

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General information about the entry

Entry name [info]	PCNA_2
Accession [info]	PS00293
Entry type [info]	PATTERN
Date [info]	01-APR-1990 CREATED; 01-JUL-1998 DATA UPDATE; 08-NOV-2023 INFO UPDATE.
PROSITE Doc. [info]	PDOC00265

Name and characterization of the entry

Description [info]	Proliferating cell nuclear antigen signature 2.
Pattern [info]	[RKA]-C-[DE]-[RH]-x(3)-[LIVMF]-x(3)-[LIVM]-x-[SGAN]-[LIVMF]-x-K- [LIVMF](2).

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_05 which contains 570'420 sequence entries.

Total number of hits	36 in 36 different sequences
Number of true positive hits	36 in 36 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	63
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	36.36 %

Comments [info]

Taxonomic range [info]	Archaea, Eukaryotes, Eukaryotic viruses
Maximum number of repetitions [info]	1
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences

36 sequences

PCNA1_ARATH (Q9M7Q7), PCNA1_DAUCA (Q00268), PCNA1_PBCV1 (Q84513),

PCNA1_PLAF7 (P61074), PCNA1_PLAFK (P31008), PCNA2_ARATH (Q9ZW35), 
PCNA2_DAUCA (Q00265), PCNA_ANGJA  (Q9W644), PCNA_BOMMO  (O01377), 
PCNA_BOVIN  (Q3ZBW4), PCNA_BRANA  (Q43124), PCNA_CATRO  (P24314), 
PCNA_CHATD  (G0SF70), PCNA_CHICK  (Q9DEA3), PCNA_COTJA  (Q9DDF1), 
PCNA_CRIGR  (P57761), PCNA_DANRE  (Q9PTP1), PCNA_DROME  (P17917), 
PCNA_HAPBU  (Q6B6N4), PCNA_HUMAN  (P12004), PCNA_MACFA  (P61258), 
PCNA_MAIZE  (Q43266), PCNA_MOUSE  (P17918), PCNA_NPVAC  (P11038), 
PCNA_NPVOP  (O10308), PCNA_ORYSJ  (P17070), PCNA_PEA(O82134), 
PCNA_POPNI  (Q9MAY3), PCNA_RAT(P04961), PCNA_SARCR  (O16852), 
PCNA_SCHPO  (Q03392), PCNA_SOYBN  (P22177), PCNA_STYCL  (P53358), 
PCNA_TOBAC  (O82797), PCNA_XENLA  (P18248), PCNA_YEAST  (P15873)

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Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
[Clustal format, color, condensed view] [Clustal format, color]
[Clustal format, plain text] [Fasta format]
Retrieve the sequence logo from the alignment

UniProtKB/Swiss-Prot
False negative sequences

63 sequences

PCNA1_AERPE (Q9YFT8), PCNA1_PYRAE (Q8ZTY0), PCNA1_SACS2 (P57766),

PCNA1_SULAC (Q4JAI6), PCNA1_SULOH (P57762), PCNA1_SULTO (Q975N2), 
PCNA1_THEKO (Q5JF32), PCNA2_AERPE (Q9Y9V7), PCNA2_PBCV1 (O41056), 
PCNA2_PYRAE (Q8ZYL6), PCNA2_SACS2 (Q97Z84), PCNA2_SULAC (Q4J9A8), 
PCNA2_SULOH (P57763), PCNA2_SULTO (Q975M2), PCNA2_THEKO (Q5JFD3), 
PCNA3_AERPE (Q9YEZ5), PCNA3_SACS2 (P57765), PCNA3_SULTO (Q973F5), 
PCNA_ARCFU  (O29912), PCNA_CAEEL  (O02115), PCNA_CENSY  (A0RXH7), 
PCNA_HALLT  (B9LU30), PCNA_HALMA  (Q9P9H8), PCNA_HALS3  (B0R7F7), 
PCNA_HALSA  (Q9HN45), PCNA_HALWD  (Q18E60), PCNA_META3  (A6UUW0), 
PCNA_METAC  (Q8TUF7), PCNA_METAR  (Q0W2J4), PCNA_METB6  (A7I849), 
PCNA_METBF  (Q46E39), PCNA_METBU  (Q12U18), PCNA_METHJ  (Q2FNX1), 
PCNA_METJA  (Q57697), PCNA_METKA  (Q8TWK3), PCNA_METLZ  (A2SSW6), 
PCNA_METM5  (A4G0K8), PCNA_METM6  (A9A8V2), PCNA_METM7  (A6VHX7), 
PCNA_METMA  (Q8PX25), PCNA_METMJ  (A3CVJ2), PCNA_METMP  (Q6LWJ8), 
PCNA_METPE  (B8GG80), PCNA_METS3  (A5UMB4), PCNA_METST  (Q2NE55), 
PCNA_METTH  (O27367), PCNA_METTP  (A0B7Y8), PCNA_METVS  (A6UQZ4), 
PCNA_MIMIV  (Q7T6Y0), PCNA_NANEQ  (Q74MV1), PCNA_NATPD  (Q3IU15), 
PCNA_NITMS  (A9A2X4), PCNA_PICTO  (Q6KZF1), PCNA_PYRAB  (Q9UYX8), 
PCNA_PYRFU  (O73947), PCNA_PYRHO  (O58398), PCNA_THEAC  (Q9HJQ0), 
PCNA_THEFM  (Q9UWR9), PCNA_THEGJ  (C5A5N6), PCNA_THEON  (B6YVZ1), 
PCNA_THEPD  (A1RXU8), PCNA_THESM  (C6A1Y5), PCNA_THEVO  (Q979S2)

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PDB
[Detailed view]

116 PDB

1AXC; 1PLQ; 1PLR; 1SXJ; 1U76; 1U7B; 1UL1; 1VYJ; 1VYM; 1W60; 2OD8; 2ZVK; 2ZVL; 2ZVM; 2ZVV; 2ZVW; 3F1W; 3GPM; 3GPN; 3JA9; 3L0W; 3L0X; 3L10; 3P87; 3PGE; 3TBL; 3V60; 3V61; 3V62; 3VKX; 3WGW; 4D2G; 4HK1; 4L60; 4L6P; 4RJF; 4YHR; 4ZTD; 5E0T; 5E0U; 5E0V; 5IY4; 5MAV; 5MLO; 5MLW; 5MOM; 5T9D; 5V7K; 5V7M; 5YCO; 5YD8; 5ZUT; 6CBI; 6CX2; 6CX3; 6CX4; 6D0Q; 6D0R; 6E49; 6EHT; 6FCM; 6FCN; 6GIS; 6GWS; 6HVO; 6K3A; 6O09; 6QC0; 6QCG; 6QH1; 6S1M; 6S1N; 6S1O; 6TNY; 6TNZ; 6VVO; 6W9W; 6WAC; 7EFA; 7KC0; 7KQ0; 7KQ1; 7M5L; 7M5M; 7M5N; 7NV0; 7NV1; 7O1E; 7O1F; 7QNZ; 7QO1; 7TFH; 7TFI; 7TFJ; 7THJ; 7THV; 7TI8; 7TIB; 7TIC; 7TID; 7TKU; 7U19; 7U1A; 7U1P; 8B8T; 8COB; 8DQX; 8DQZ; 8DR0; 8DR1; 8DR3; 8DR4; 8DR5; 8DR6; 8DR7; 8E84
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