PROSITE entry PS00303

View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission

General information about the entry

Entry name [info]	S100_CABP
Accession [info]	PS00303
Entry type [info]	PATTERN
Date [info]	01-APR-1990 CREATED; 01-APR-2006 DATA UPDATE; 29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC00275

Name and characterization of the entry

Description [info]	S-100/ICaBP type calcium binding protein signature.
Pattern [info]	[LIVMFYW](2)-x(2)-[LKQ]-D-x(3)-[DN]-x(3)-[DNSG]-[FY]-x-[ES]-[FYVC]-x(2)- [LIVMFS]-[LIVMF].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_06 which contains 572'619 sequence entries.

Total number of hits	93 in 93 different sequences
Number of true positive hits	86 in 86 different sequences
Number of 'unknown' hits	0
Number of false positive hits	7 in 7 different sequences
Number of false negative sequences	14
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	92.47 %
Recall (true positives / (true positives + false negatives))	86.00 %

Comments [info]

Taxonomic range [info]	Eukaryotes
Maximum number of repetitions [info]	1
Version [info]	2

Cross-references [info]

UniProtKB/Swiss-Prot True positive sequences	86 sequences CML45_ARATH (Q9MBG5), FILA2_HUMAN (Q5D862), FILA2_MOUSE (Q2VIS4), FILA_HUMAN (P20930), HORN_HUMAN (Q86YZ3), HORN_MOUSE (Q8VHD8), M126_CHICK (P28318), RPTN_HUMAN (Q6XPR3), RPTN_MOUSE (P97347), S100B_BOVIN (P02638), S100B_HUMAN (P04271), S100B_MOUSE (P50114), S100B_RABIT (Q6YNR6), S100B_RAT (P04631), S100G_BOVIN (P02633), S100G_HORSE (Q865V3), S100G_HUMAN (P29377), S100G_MOUSE (P97816), S100G_PIG (P02632), S100G_RAT (P02634), S100P_HUMAN (P25815), S100Z_DANRE (Q503K9), S100Z_HUMAN (Q8WXG8), S10A1_BOVIN (P02639), S10A1_HUMAN (P23297), S10A1_MISFO (Q7LZT1), S10A1_MOUSE (P56565), S10A1_PONAB (Q5RC36), S10A1_RAT (P35467), S10A2_BOVIN (P10462), S10A2_HUMAN (P29034), S10A3_HUMAN (P33764), S10A3_MOUSE (P62818), S10A3_RAT (P62819), S10A4_BOVIN (P35466), S10A4_CANLF (Q9TV56), S10A4_HUMAN (P26447), S10A4_MOUSE (P07091), S10A4_RAT (P05942), S10A5_HUMAN (P33763), S10A5_MOUSE (P63084), S10A5_RAT (P63083), S10A6_CHICK (Q98953), S10A6_HORSE (O77691), S10A6_HUMAN (P06703), S10A6_MOUSE (P14069), S10A6_PIG (Q2EN75), S10A6_RABIT (P30801), S10A6_RAT (P05964), S10A7_BOVIN (Q28050), S10A7_HORSE (Q14ST5), S10A7_HUMAN (P31151), S10A8_BOVIN (P28782), S10A8_HUMAN (P05109), S10A8_MOUSE (P27005), S10A8_RAT (P50115), S10A9_BOVIN (P28783), S10A9_HUMAN (P06702), S10A9_MOUSE (P31725), S10A9_RABIT (P50117), S10A9_RAT (P50116), S10AA_BOVIN (P60902), S10AA_CHICK (P27003), S10AA_HUMAN (P60903), S10AA_MACMU (P62504), S10AA_MOUSE (P08207), S10AA_PIG (P04163), S10AA_RABIT (Q6SQH4), S10AA_RAT (P05943), S10AB_CHICK (P24479), S10AB_HUMAN (P31949), S10AB_MOUSE (P50543), S10AB_PIG (P31950), S10AB_RABIT (P24480), S10AB_RAT (Q6B345), S10AC_BOVIN (P79105), S10AC_HUMAN (P80511), S10AC_PIG (P80310), S10AC_RABIT (O77791), S10AG_BOVIN (Q0VCM0), S10AG_HUMAN (Q96FQ6), S10I_ICTPU (Q91061), S1A7A_HUMAN (Q86SG5), TRHY_HUMAN (Q07283), TRHY_RABIT (P37709), TRHY_SHEEP (P22793) » more Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format] Retrieve the sequence logo from the alignment
UniProtKB/Swiss-Prot False negative sequences	14 sequences S10AA_XENLA (P27004), S10AD_BOVIN (P79342), S10AD_HUMAN (Q99584), S10AD_MOUSE (P97352), S10AE_BOVIN (Q3MHP3), S10AE_HUMAN (Q9HCY8), S10AE_MOUSE (Q9D2Q8), S115A_GORGO (A7K6Y8), S115A_MOUSE (Q6S5I3), S115A_PONAB (A7K6Y9), S1A7B_HUMAN (Q5SY68), TCHL1_BOVIN (A6QP92), TCHL1_HUMAN (Q5QJ38), TCHL1_MOUSE (Q9D3P1) » more
UniProtKB/Swiss-Prot False positive sequences	7 sequences CABP7_HUMAN (Q86V35), CABP7_MOUSE (Q91ZM8), CABP7_PAPAN (Q866X0), CABP7_RAT (Q66H96), CABP8_HUMAN (Q9BXU9), CABP8_MOUSE (Q9JJG7), CABP8_RAT (Q06BI3) » more
PDB [Detailed view]	175 PDB 1A03; 1A4P; 1B1G; 1B4C; 1BOC; 1BOD; 1BT6; 1CB1; 1CDN; 1CFP; 1CLB; 1CNP; 1D1O; 1DT7; 1E8A; 1GQM; 1HT9; 1IG5; 1IGV; 1IRJ; 1J55; 1JWD; 1K2H; 1K8U; 1K96; 1K9K; 1K9P; 1KCY; 1KQV; 1KSM; 1KSO; 1M31; 1MHO; 1MQ1; 1MR8; 1MWN; 1N65; 1NSH; 1ODB; 1OZO; 1PSB; 1PSR; 1QLK; 1QLS; 1SYM; 1UWO; 1XK4; 1XYD; 1ZFS; 2BCA; 2BCB; 2CNP; 2H61; 2JPT; 2JTT; 2K2F; 2K7O; 2KAX; 2KAY; 2KBM; 2L0P; 2L50; 2L51; 2LHL; 2LLS; 2LLT; 2LLU; 2LNK; 2LP2; 2LP3; 2LUC; 2LUX; 2M1K; 2M3W; 2M49; 2M9G; 2MAZ; 2MJW; 2MRD; 2PRU; 2PSR; 2Q91; 2RGI; 2WC8; 2WCB; 2WCE; 2WCF; 2WND; 2WOR; 2WOS; 2Y5I; 3C1V; 3CGA; 3CR2; 3CR4; 3CR5; 3CZT; 3D0Y; 3D10; 3GK1; 3GK2; 3GK4; 3HCM; 3ICB; 3IQO; 3IQQ; 3KO0; 3LK0; 3LK1; 3LLE; 3M0W; 3NSI; 3NSK; 3NSL; 3NSO; 3NXA; 3PSR; 3RLZ; 3RM1; 3ZWH; 4AQI; 4AQJ; 4CFQ; 4CFR; 4DIR; 4DRW; 4DUQ; 4ETO; 4FQO; 4FTG; 4GGF; 4HRE; 4HRG; 4HRH; 4HSZ; 4ICB; 4P2Y; 4PCW; 4PDZ; 4PE0; 4PE1; 4PE4; 4PE7; 4XJK; 4XYN; 4YBH; 5CSF; 5CSI; 5CSJ; 5CSN; 5D7F; 5DKN; 5DKQ; 5DKR; 5ER4; 5ER5; 5HLO; 5HLV; 5HYD; 5I8N; 5K89; 5LPU; 5W1F; 6DS2; 6T58; 6WN7; 6ZDY; 7NMI; 7PSP; 7PSQ; 7QUV; 7UI5; 8FJ8; 8SJB; 8SJC » more