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Entry: PS00326

General information about the entry

Entry name [info] TROPOMYOSIN
Accession [info] PS00326
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED;
01-DEC-2004 DATA UPDATE;
22-FEB-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00290

Name and characterization of the entry

Description [info] Tropomyosins signature.
Pattern [info] 
L-K-[EAD]-A-E-x-R-A-[ET].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_01 which contains 569'213 sequence entries.


Total number of hits 79 in 79 different sequences
Number of true positive hits 79 in 79 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 11
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 87.78 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 79 sequences 

TPM01_PERAM (P0DSM6    ), TPM02_PERAM (P0DSM7    ), TPM03_CRAGI (Q95WY0    ), 

TPM03_PERAM (C5J049    ), TPM1_BIOGL  (P42636    ), TPM1_BOMMO  (Q1HPU0    ), 
TPM1_BOVIN  (Q5KR49    ), TPM1_CAEEL  (Q22866    ), TPM1_CHEAU  (P84335    ), 
TPM1_CHICK  (P04268    ), TPM1_COTJA  (P58773    ), TPM1_DANRE  (P13104    ), 
TPM1_DROME  (P06754    ), TPM1_HUMAN  (P09493    ), TPM1_MOUSE  (P58771    ), 
TPM1_PIG    (P42639    ), TPM1_RABIT  (P58772    ), TPM1_RANTE  (P13105    ), 
TPM1_RAT    (P04692    ), TPM1_SCHMA  (P42637    ), TPM1_XENLA  (Q01173    ), 
TPM2_BIOGL  (P43689    ), TPM2_BOMMO  (Q1HPQ0    ), TPM2_BOVIN  (Q5KR48    ), 
TPM2_CHICK  (P19352    ), TPM2_DROME  (P09491    ), TPM2_HUMAN  (P07951    ), 
TPM2_MOUSE  (P58774    ), TPM2_RABIT  (P58776    ), TPM2_RAT    (P58775    ), 
TPM3_BOVIN  (Q5KR47    ), TPM3_CAEEL  (Q27249    ), TPM3_HUMAN  (P06753    ), 
TPM3_MOUSE  (P21107    ), TPM3_PIG    (A1XQV4    ), TPM3_RAT    (Q63610    ), 
TPM4_DROME  (P49455    ), TPM4_HORSE  (P02561    ), TPM4_HUMAN  (P67936    ), 
TPM4_MOUSE  (Q6IRU2    ), TPM4_PIG    (P67937    ), TPM4_RAT    (P09495    ), 
TPMM_TRICO  (P15846    ), TPM_ACAVI   (O01673    ), TPM_ANISI   (Q9NAS5    ), 
TPM_BLAGE   (Q9NG56    ), TPM_BRABE   (Q9NDS0    ), TPM_CAEBR   (Q60UW4    ), 
TPM_CHAFE   (Q9N2R3    ), TPM_CHIKI   (O96764    ), TPM_CHIOP   (A2V735    ), 
TPM_CHLNI   (O02389    ), TPM_DERFA   (Q23939    ), TPM_DERPT   (O18416    ), 
TPM_ERISI   (A4URH3    ), TPM_HALDV   (Q9GZ71    ), TPM_HALRU   (Q25145    ), 
TPM_HOMAM   (O44119    ), TPM_LEPDS   (Q9NFZ4    ), TPM_LEPSA   (Q8T380    ), 
TPM_LOCMI   (P31816    ), TPM_MACRS   (V5NBV4    ), TPM_METEN   (Q25456    ), 
TPM_MIMNO   (Q9GZ69    ), TPM_MYTED   (Q25457    ), TPM_MYTGA   (P91958    ), 
TPM_ONCVO   (Q25632    ), TPM_PANBO   (P86704    ), TPM_PANST   (O61379    ), 
TPM_PENAT   (Q3Y8M6    ), TPM_PENMO   (A1KYZ2    ), TPM_PERFU   (Q8T6L5    ), 
TPM_PERVI   (Q9GZ70    ), TPM_PORPE   (M1H607    ), TPM_PSOOV   (Q3BJY7    ), 
TPM_SCHHA   (Q26503    ), TPM_SCHJA   (Q26519    ), TPM_TRIPS   (Q8WR63    ), 
TPM_TRISP   (Q95VA8    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 11 sequences 

TPM1_CIOIN  (Q07068    ), TPM1_HYDVU  (P39921    ), TPM1_PODCA  (P41114    ), 

TPM2_PODCA  (Q9U5M4    ), TPM2_SCHMA  (P42638    ), TPM_CLOSI   (Q23758    ), 
TPM_CORAP   (O97192    ), TPM_ECHGR   (O16127    ), TPM_ECHMU   (Q95PU1    ), 
TPM_HAELO   (Q8IT89    ), TPM_RHIMP   (O97162    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 1 sequence 

TPM_TURCO   (Q7M3Y8    )


				
	

	

		PDB
[Detailed view]		
		
			16 PDB
			


			1C1G; 2D3E; 2EFR; 2EFS; 2TMA; 2W49; 2W4U; 6X5Z; 7KO4; 7KO5; 7KO7; 7KON; 
			
				7KOR; 7NEP; 7UTI; 7UTL
			
			

			» more

				
	





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