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PROSITE entry PS00326


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General information about the entry

Entry name [info] TROPOMYOSIN
Accession [info] PS00326
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED;
01-DEC-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00290

Name and characterization of the entry

Description [info] Tropomyosins signature.
Pattern [info] 
L-K-[EAD]-A-E-x-R-A-[ET].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_04 which contains 571'864 sequence entries.


Total number of hits 79 in 79 different sequences
Number of true positive hits 79 in 79 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 11
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 87.78 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 79 sequences 

TPM01_PERAM (P0DSM6), TPM02_PERAM (P0DSM7), TPM03_CRAGI (Q95WY0), 

TPM03_PERAM (C5J049), TPM1_BIOGL  (P42636), TPM1_BOMMO  (Q1HPU0), 
TPM1_BOVIN  (Q5KR49), TPM1_CAEEL  (Q22866), TPM1_CHEAU  (P84335), 
TPM1_CHICK  (P04268), TPM1_COTJA  (P58773), TPM1_DANRE  (P13104), 
TPM1_DROME  (P06754), TPM1_HUMAN  (P09493), TPM1_MOUSE  (P58771), 
TPM1_PIG(P42639), TPM1_RABIT  (P58772), TPM1_RANTE  (P13105), 
TPM1_RAT(P04692), TPM1_SCHMA  (P42637), TPM1_XENLA  (Q01173), 
TPM2_BIOGL  (P43689), TPM2_BOMMO  (Q1HPQ0), TPM2_BOVIN  (Q5KR48), 
TPM2_CHICK  (P19352), TPM2_DROME  (P09491), TPM2_HUMAN  (P07951), 
TPM2_MOUSE  (P58774), TPM2_RABIT  (P58776), TPM2_RAT(P58775), 
TPM3_BOVIN  (Q5KR47), TPM3_CAEEL  (Q27249), TPM3_HUMAN  (P06753), 
TPM3_MOUSE  (P21107), TPM3_PIG(A1XQV4), TPM3_RAT(Q63610), 
TPM4_DROME  (P49455), TPM4_HORSE  (P02561), TPM4_HUMAN  (P67936), 
TPM4_MOUSE  (Q6IRU2), TPM4_PIG(P67937), TPM4_RAT(P09495), 
TPMM_TRICO  (P15846), TPM_ACAVI   (O01673), TPM_ANISI   (Q9NAS5), 
TPM_BLAGE   (Q9NG56), TPM_BRABE   (Q9NDS0), TPM_CAEBR   (Q60UW4), 
TPM_CHAFE   (Q9N2R3), TPM_CHIKI   (O96764), TPM_CHIOP   (A2V735), 
TPM_CHLNI   (O02389), TPM_DERFA   (Q23939), TPM_DERPT   (O18416), 
TPM_ERISI   (A4URH3), TPM_HALDV   (Q9GZ71), TPM_HALRU   (Q25145), 
TPM_HOMAM   (O44119), TPM_LEPDS   (Q9NFZ4), TPM_LEPSA   (Q8T380), 
TPM_LOCMI   (P31816), TPM_MACRS   (V5NBV4), TPM_METEN   (Q25456), 
TPM_MIMNO   (Q9GZ69), TPM_MYTED   (Q25457), TPM_MYTGA   (P91958), 
TPM_ONCVO   (Q25632), TPM_PANBO   (P86704), TPM_PANST   (O61379), 
TPM_PENAT   (Q3Y8M6), TPM_PENMO   (A1KYZ2), TPM_PERFU   (Q8T6L5), 
TPM_PERVI   (Q9GZ70), TPM_PORPE   (M1H607), TPM_PSOOV   (Q3BJY7), 
TPM_SCHHA   (Q26503), TPM_SCHJA   (Q26519), TPM_TRIPS   (Q8WR63), 
TPM_TRISP   (Q95VA8)
» more

UniProtKB/Swiss-Prot
False negative sequences		 11 sequences 

TPM1_CIOIN  (Q07068), TPM1_HYDVU  (P39921), TPM1_PODCA  (P41114), 

TPM2_PODCA  (Q9U5M4), TPM2_SCHMA  (P42638), TPM_CLOSI   (Q23758), 
TPM_CORAP   (O97192), TPM_ECHGR   (O16127), TPM_ECHMU   (Q95PU1), 
TPM_HAELO   (Q8IT89), TPM_RHIMP   (O97162)
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 1 sequence 

TPM_TURCO   (Q7M3Y8)


				
	

	

		PDB
[Detailed view]		
		
			33 PDB
			


			1C1G; 2D3E; 2EFR; 2EFS; 2TMA; 2W49; 2W4U; 6X5Z; 7KO4; 7KO5; 7KO7; 7KON; 
			
				7KOR; 7NEP; 7UTI; 7UTL; 8DD0; 8EFH; 8EFI; 8ENC; 8Q4G; 8UWW; 8UWX; 8UWY; 
				8UYD; 8UZ5; 8UZ6; 8UZX; 8UZY; 8V01; 8V0I; 8V0K; 8V0Y
			
			

			» more