PROSITE entry PS00357
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General information about the entry
| Entry name [info] | HISTONE_H2B |
| Accession [info] | PS00357 |
| Entry type [info] | PATTERN |
| Date [info] |
01-NOV-1990 CREATED;
01-NOV-1995 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00308 |
Name and characterization of the entry
| Description [info] | Histone H2B signature. |
| Pattern [info] |
[KR]-E-[LIVM]-[EQ]-T-x(2)-[KR]-x-[LIVM](2)-x-[PAG]-[DE]-L-x-[KR]-H-A- [LIVM]-[STA]-E-G. |
Numerical results [info]
| Total number of hits | 192 in 192 different sequences |
| Number of true positive hits | 192 in 192 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 14 |
| Number of 'partial' sequences | 8 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 93.20 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
192 sequences
H2B10_ARATH (Q9FFC0), H2B10_ORYSI (A2WKS3), H2B10_ORYSJ (Q9LGI2), H2B11_ARATH (P40283), H2B11_ORYSI (A2WWU2), H2B11_ORYSJ (Q943L2), H2B11_XENLA (P02281), H2B12_XENLA (P06900), H2B1A_HUMAN (Q96A08), H2B1A_MOUSE (P70696), H2B1A_RAT (Q00729), H2B1B_HUMAN (P33778), H2B1B_MOUSE (Q64475), H2B1C_HUMAN (P62807), H2B1C_MOUSE (Q6ZWY9), H2B1D_HUMAN (P58876), H2B1F_MOUSE (P10853), H2B1H_HUMAN (Q93079), H2B1H_MOUSE (Q64478), H2B1J_HUMAN (P06899), H2B1K_BOVIN (Q2M2T1), H2B1K_HUMAN (O60814), H2B1K_MACFA (Q2PFX4), H2B1K_MOUSE (Q8CGP1), H2B1L_HUMAN (Q99880), H2B1M_HUMAN (Q99879), H2B1M_MOUSE (P10854), H2B1N_BOVIN (Q32L48), H2B1N_HUMAN (Q99877), H2B1O_HUMAN (P23527), H2B1P_MOUSE (Q8CGP2), H2B1_ARATH (Q9LQQ4), H2B1_BOVIN (P62808), H2B1_CAEEL (P04255), H2B1_CANAL (P48989), H2B1_CANGA (Q6FWM8), H2B1_CHICK (P0C1H3), H2B1_CHLRE (P50565), H2B1_DANRE (Q5BJA5), H2B1_DEBHA (Q6BRG2), H2B1_EREGS (Q74ZL5), H2B1_KLULA (Q6CK60), H2B1_MAIZE (P30755), H2B1_MEDTR (Q1S9I9), H2B1_ORYSI (A2XF66), H2B1_ORYSJ (A3AGM4), H2B1_PONAB (Q5R893), H2B1_RAT(Q00715), H2B1_SCHPO (P04913), H2B1_SOLLC (O65821), H2B1_TETTS (P08993), H2B1_TIGCA (P35068), H2B1_WHEAT (P27807), H2B1_YEAST (P02293), H2B2B_MOUSE (Q64525), H2B2E_HUMAN (Q16778), H2B2E_MOUSE (Q64524), H2B2E_PONAB (Q5RCP8), H2B2F_HUMAN (Q5QNW6), H2B2_CAEEL (Q27894), H2B2_CANAL (Q59VP1), H2B2_CANGA (Q6FM30), H2B2_CHLRE (P54345), H2B2_DEBHA (Q6BKW7), H2B2_EREGS (Q8J1F8), H2B2_KLULA (Q6CMV8), H2B2_MAIZE (P30756), H2B2_ORYSI (A2YWI3), H2B2_ORYSJ (Q6ZBP3), H2B2_PICST (A3LXE6), H2B2_SOLLC (O65818), H2B2_TETTS (P08994), H2B2_WHEAT (P05621), H2B2_YEAST (P02294), H2B3A_MOUSE (Q9D2U9), H2B3B_HUMAN (Q8N257), H2B3B_MOUSE (Q8CGP0), H2B3_ARATH (Q9SI96), H2B3_CAEEL (Q27484), H2B3_CHLRE (P54346), H2B3_DANRE (Q6PC60), H2B3_MAIZE (Q43261), H2B3_MEDTR (Q1SU99), H2B3_ORYSI (A2WKP3), H2B3_ORYSJ (Q94JJ7), H2B3_SOLLC (O65819), H2B3_TIGCA (P35069), H2B3_VOLCA (P16867), H2B3_WHEAT (Q43217), H2B4_ARATH (Q9ZUS0), H2B4_CAEEL (Q27876), H2B4_CHLRE (P54347), H2B4_MAIZE (P49120), H2B4_ORYSI (A2WKP5), H2B4_ORYSJ (Q94JJ4), H2B4_VOLCA (P16868), H2B4_WHEAT (Q43215), H2B5_ARATH (Q9SF55), H2B5_CHICK (P0C1H4), H2B5_MAIZE (P54348), H2B5_ORYSI (A2WKT4), H2B5_ORYSJ (Q94JE1), H2B5_WHEAT (Q43216), H2B6_ARATH (O23629), H2B6_ORYSI (A2WKT1), H2B6_ORYSJ (Q9LGH4), H2B7_ARATH (Q9LZT0), H2B7_CHICK (P0C1H5), H2B7_ORYSI (A2WKS8), H2B7_ORYSJ (Q7GBK0), H2B8_ARATH (Q9LFF6), H2B8_CHICK (Q9PSW9), H2B8_ORYSI (A2WKS5), H2B8_ORYSJ (Q9LGH8), H2B9_ARATH (Q9LZ45), H2B9_ORYSI (A2Y7R3), H2B9_ORYSJ (Q6F362), H2BE1_PSAMI (P02287), H2BE2_PSAMI (P02288), H2BE_STRPU (P02289), H2BFS_HUMAN (P57053), H2BK1_HUMAN (A0A2R8Y619), H2BL1_PSAMI (P07794), H2BL1_STRPU (P16888), H2BL2_PSAMI (P07795), H2BL3_STRPU (P16889), H2BL4_STRPU (P16890), H2BS1_PARAN (P02290), H2BS1_PSAMI (Q27749), H2BS1_STRPU (P06145), H2BS2_LYTPI (P06146), H2BS2_PARAN (P02291), H2BS2_PSAMI (Q27750), H2BS2_STRPU (P16887), H2BS3_PARAN (P02292), H2B_ACRFO (P35067), H2B_AGABI (P78567), H2B_AJECA (Q7Z9J4), H2B_ANOGA (Q27442), H2B_ASPCL (A1CJ09), H2B_ASPFU (Q4WWC5), H2B_ASPNC (A2QY49), H2B_ASPOR (Q2U5A9), H2B_ASPTN (Q0CBD1), H2B_ASTRU (P02286), H2B_CAIMO (P14001), H2B_CAPAN (O49118), H2B_CHAGB (Q2HH38), H2B_CHITH (P21897), H2B_COCIM (Q1E5N0), H2B_CRYNB (P0CO03), H2B_CRYNJ (P0CO02), H2B_DROER (P59781), H2B_DROHY (P17271), H2B_DROMA (Q76FE5), H2B_DROME (P02283), H2B_DROOR (Q76FE9), H2B_DROSE (Q76FD7), H2B_DROSI (P59782), H2B_DROTE (Q76FF3), H2B_DROYA (Q8I1N0), H2B_EMENI (P23754), H2B_ENTIV (P40284), H2B_EUPCR (O97484), H2B_GIBZE (Q4HTT2), H2B_GOSHI (O22582), H2B_HOLTU (P48557), H2B_LEIEN (P27893), H2B_LODEL (A5DWF0), H2B_MARGL (P02285), H2B_NEOFI (A1D8G9), H2B_NEUCR (P37210), H2B_OLILU (P82887), H2B_ONCMY (P69069), H2B_PATGR (P02284), H2B_PATPE (Q7M4G7), H2B_PENVA (P83863), H2B_PHANO (Q0U1A0), H2B_PLADU (P19374), H2B_PODAS (Q875B7), H2B_PYRO3 (L7I1W3), H2B_PYRO7 (P0CT13), H2B_ROSNE (Q8J1K2), H2B_SALTR (P69070), H2B_SIPNU (P30757), H2B_TETPY (Q7M400), H2B_TOBAC (P93354), H2B_TRYCR (P27795), H2B_URECA (P27326), H2B_USTMA (Q4PEF8), H2B_ZHASC (Q75VN4), HSB1_PICST (A3LZZ1)» more
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| UniProtKB/Swiss-Prot False negative sequences |
14 sequences
H2B1_PICGU (A5DJJ1), H2B2C_HUMAN (Q6DN03), H2B2D_HUMAN (Q6DRA6), H2B2_ARATH (Q9SGE3), H2B2_MEDTR (Q1SWQ1), H2B2_PICGU (A5DBG5), H2BFM_HUMAN (P0C1H6), H2BL1_MOUSE (Q9D9Z7), H2BV1_DICDI (Q54BC2), H2BV2_DICDI (Q7KWR7), H2BV3_DICDI (Q54LP8), H2BV_BOVIN (Q8WNR4), H2BWT_HUMAN (Q7Z2G1), H2B_ENCCU (Q8SRE2)» more |
| UniProtKB/Swiss-Prot 'Partial' sequences |
8 sequences
H2B1_ICTPU (P81903), H2B3_ICTPU (P81904), H2BS1_ECHES (P13281), H2BS2_ECHES (P13282), H2BS3_ECHES (P13283), H2B_CRONI (P02280), H2B_CYPCA (P83837), H2B_PEA (Q99285)» more |
| PDB [Detailed view] |
688 PDB
1AOI; 1EQZ; 1F66; 1HIO; 1HQ3; 1ID3; 1KX3; 1KX4; 1KX5; 1M18; 1M19; 1M1A; 1P34; 1P3A; 1P3B; 1P3F; 1P3G; 1P3I; 1P3K; 1P3L; 1P3M; 1P3O; 1P3P; 1S32; 1TZY; 1U35; 1ZBB; 1ZLA; 2ARO; 2CV5; 2F8N; 2FJ7; 2HIO; 2JSS; 2NQB; 2NZD; 2PYO; 2RVQ; 2XQL; 3A6N; 3AFA; 3AN2; 3AV1; 3AV2; 3AYW; 3AZE; 3AZF; 3AZG; 3AZH; 3AZI; 3AZJ; 3AZK; 3AZL; 3AZM; 3AZN; 3B6F; 3B6G; 3C9K; 3KUY; 3KWQ; 3KXB; 3LEL; 3LJA; 3LZ0; 3LZ1; 3MGP; 3MGQ; 3MGR; 3MGS; 3MNN; 3MVD; 3O62; 3REH; 3REI; 3REJ; 3REK; 3REL; 3TU4; 3UT9; 3UTA; 3UTB; 3W96; 3W97; 3W98; 3W99; 3WA9; 3WAA; 3WKJ; 3WTP; 3X1S; 3X1T; 3X1U; 3X1V; 4CAY; 4J8U; 4J8V; 4J8W; 4J8X; 4JJN; 4KGC; 4KHA; 4KUD; 4LD9; 4M6B; 4NFT; 4QLC; 4R8P; 4WNN; 4WU8; 4WU9; 4X23; 4XUJ; 4XZQ; 4YM5; 4YM6; 4YS3; 4Z5T; 4Z66; 4ZUX; 5AV5; 5AV6; 5AV8; 5AV9; 5AVB; 5AVC; 5AY8; 5B0Y; 5B0Z; 5B1L; 5B1M; 5B24; 5B2I; 5B2J; 5B31; 5B32; 5B33; 5B40; 5BT1; 5CP6; 5CPI; 5CPJ; 5CPK; 5DNM; 5DNN; 5E5A; 5F99; 5FUG; 5G2E; 5GSE; 5GSU; 5GT0; 5GT3; 5GTC; 5GXQ; 5HQ2; 5JRG; 5KGF; 5NL0; 5O9G; 5OMX; 5ONG; 5ONW; 5OXV; 5OY7; 5VEY; 5WCU; 5X0X; 5X0Y; 5X7X; 5XF3; 5XF4; 5XF5; 5XF6; 5XM0; 5XM1; 5Y0C; 5Y0D; 5Z23; 5Z30; 5Z3L; 5Z3O; 5Z3U; 5Z3V; 5ZBX; 6A5L; 6A5O; 6A5P; 6A5R; 6A5T; 6A5U; 6A7U; 6AE8; 6BUZ; 6C0W; 6DZT; 6E0C; 6E0P; 6ESF; 6ESG; 6ESH; 6ESI; 6FML; 6FQ5; 6FQ6; 6FQ8; 6GEJ; 6GEN; 6HKT; 6HTS; 6I84; 6INQ; 6IPU; 6IQ4; 6IR9; 6IRO; 6IY2; 6IY3; 6J4W; 6J4X; 6J4Y; 6J4Z; 6J50; 6J51; 6J99; 6JM9; 6JMA; 6JOU; 6JXD; 6JYL; 6K00; 6K01; 6K03; 6K09; 6K0C; 6K1I; 6K1J; 6K1K; 6K1P; 6KBB; 6KE9; 6KIU; 6KIV; 6KIW; 6KIX; 6KIZ; 6KVD; 6KW3; 6KW4; 6KXV; 6L49; 6L4A; 6L9H; 6L9Z; 6LA2; 6LA8; 6LA9; 6LAB; 6LE9; 6LER; 6LTJ; 6M2M; 6M3V; 6M44; 6M4D; 6M4G; 6M4H; 6MUO; 6MUP; 6N1Z; 6NJ9; 6NN6; 6NOG; 6NQA; 6NZO; 6O1D; 6O96; 6OM3; 6PA7; 6PWE; 6PWF; 6PWV; 6PWW; 6PWX; 6PX1; 6PX3; 6QLD; 6R0C; 6R1T; 6R1U; 6R25; 6R8Y; 6R8Z; 6R90; 6R91; 6R92; 6R93; 6R94; 6RNY; 6RYR; 6RYU; 6S01; 6SE0; 6SE6; 6SEE; 6SEF; 6SEG; 6T79; 6T7A; 6T7B; 6T7C; 6T7D; 6T90; 6T93; 6T9L; 6TDA; 6TEM; 6UGM; 6UH5; 6UPH; 6UPK; 6UPL; 6USJ; 6UXW; 6V2K; 6V92; 6VEN; 6VYP; 6VZ4; 6W4L; 6W5I; 6W5M; 6W5N; 6WKR; 6WZ5; 6WZ9; 6X0N; 6X59; 6X5A; 6XJD; 6Y5D; 6YN1; 6YOV; 6ZHX; 6ZHY; 7A08; 7AT8; 7BP2; 7BP4; 7BP5; 7BP6; 7BWD; 7BXT; 7BY0; 7C0M; 7C7X; 7CCQ; 7CCR; 7COW; 7CRO; 7CRP; 7CRQ; 7CRR; 7D1Z; 7D20; 7DBH; 7DBP; 7DLX; 7E8D; 7E8I; 7E9C; 7E9F; 7EA5; 7EA8; 7EG6; 7EGP; 7ENN; 7JO9; 7JOA; 7JZV; 7K5X; 7K5Y; 7K60; 7K61; 7K63; 7K6P; 7K6Q; 7K78; 7K7G; 7KBD; 7KBE; 7KBF; 7KTQ; 7LYA; 7LYB; 7LYC; 7M1X; 7MBM; 7MBN; 7NKX; 7NKY; 7NL0; 7OH9; 7OHA; 7OHB; 7OHC; 7ON1; 7OTQ; 7PET; 7PEU; 7PEV; 7PEW; 7PEX; 7PEY; 7PEZ; 7PF0; 7PF2; 7PF3; 7PF4; 7PF5; 7PF6; 7PFA; 7PFC; 7PFD; 7PFE; 7PFF; 7PFT; 7PFU; 7PFV; 7PFW; 7PFX; 7PII; 7PJ1; 7R5R; 7SCY; 7SCZ; 7SSA; 7SWY; 7TAN; 7TN2; 7TRF; 7U0G; 7U0I; 7U0J; 7U46; 7U47; 7U4D; 7U50; 7U51; 7U52; 7U53; 7UD5; 7UNC; 7UND; 7UV9; 7UX9; 7V90; 7V96; 7V99; 7V9C; 7V9J; 7V9K; 7V9S; 7VA4; 7VBM; 7VCL; 7VDT; 7VDV; 7VVU; 7VVZ; 7VZ4; 7W9V; 7WBV; 7WBW; 7WBX; 7WLP; 7X3T; 7X3V; 7X3W; 7X3X; 7XCR; 7XCT; 7XD0; 7XD1; 7XFC; 7XFH; 7XFI; 7XFJ; 7XFL; 7XFM; 7XFN; 7XNP; 7XPX; 7XSE; 7XSX; 7XSZ; 7XT7; 7XTD; 7XTI; 7XVL; 7XVM; 7XX5; 7XX6; 7XYF; 7XYG; 7XZX; 7XZY; 7XZZ; 7Y00; 7Y7I; 7Y8R; 7YBF; 7YI1; 7YI4; 7YI5; 7YQK; 7YRD; 7YRG; 7YWX; 7YYH; 7ZI4; 7ZS9; 7ZSA; 7ZSB; 8AAG; 8ATF; 8AV6; 8B0A; 8BVW; 8BYQ; 8BZ1; 8CBN; 8CBQ; 8CEO; 8CWW; 8CZE; 8DK5; 8DU4; 8ETT; 8ETV; 8EU2; 8EUE; 8EUJ; 8EVG; 8EVH; 8EVI; 8EVJ; 8F0X; 8F1E; 8F86; 8G57; 8G6G; 8G6H; 8G6Q; 8G6S; 8G86; 8G88; 8G8B; 8G8G; 8GPN; 8GRQ; 8GUI; 8GUJ; 8GUK; 8H0V; 8H0W; 8H1T; 8HAG; 8HAH; 8HAI; 8HAJ; 8HAK; 8HAL; 8HAM; 8HAN; 8HE5; 8HQY; 8HR1; 8I17; 8IEG; 8IEJ; 8IHL; 8JH2; 8JH3; 8JH4; 8JHF; 8JHG; 8JL9; 8JLA; 8JLB; 8JLD; 8JND; 8JNE; 8JNF; 8KB5; 8KD2; 8KD3; 8KD4; 8KD5; 8KD6; 8KD7; 8OF4; 8OFF; 8OL1; 8OO7; 8OOA; 8OOP; 8OOS; 8OSJ; 8OSK; 8OSL; 8OTS; 8OTT; 8OW0; 8OW1; 8OX0; 8OX1; 8PC5; 8PC6; 8PEO; 8PEP; 8PKI; 8PP6; 8PP7; 8Q36; 8Q3E; 8Q3M; 8Q3X; 8QKT; 8RBX; 8SIY; 8SMW; 8SMX; 8SMY; 8SMZ; 8SN0; 8SN1; 8SN2; 8SN3; 8SN4; 8SN5; 8SN6; 8SN7; 8SN8; 8SN9; 8SNA; 8SPS; 8SPU; 8SVF; 8SYP; 8T3T; 8T3W; 8T3Y; 8T9F; 8T9H; 8THU; 8TOF; 8TXV; 8TXW; 8TXX; 8U13; 8U14; 8UPF; 8UQ8; 8UQ9; 8UQA; 8UQB; 8UQC; 8UQD; 8UQE; 8UX1; 8V4Y; 8V6V; 8V7L; 8WG5; 8WH5; 8WH8; 8WH9; 8WHA; 8WHB; 8X15; 8X19; 8X1C; 8XBT; 8XBU; 8XGC; 8YJF; 8YJM; 8YTI » more |