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Entry: PS00363

General information about the entry

Entry name [info] BACTERIAL_PQQ_1
Accession [info] PS00363
Entry type [info] PATTERN
Date [info] 01-NOV-1990 CREATED;
01-DEC-2004 DATA UPDATE;
22-APR-2020 INFO UPDATE.
PROSITE Doc. [info] PDOC00375

Name and characterization of the entry

Description [info] Bacterial quinoprotein dehydrogenases signature 1.
Pattern [info] 
[DEN]-[WV]-x(3)-G-[RKNM]-x(6)-[FYW]-[SV]-x(4)-[LIVM]-N-x(2)-N-V-x(2)-L-
[RKT].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2020_02 which contains 562'253 sequence entries.


Total number of hits 13 in 13 different sequences
Number of true positive hits 13 in 13 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 10
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 56.52 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 13 sequences 

ADHA_ACEAC  (P18278    ), ADHA_GLUOX  (O05542    ), ADHA_GLUPO  (P28036    ), 

ADHA_KOMEU  (Q44002    ), DHGA_ACICA  (P05465    ), DHG_ECOLI   (P15877    ), 
DHG_GLUOX   (P27175    ), DHM1_METEA  (P16027    ), DHM1_METOR  (P15279    ), 
DHM1_PARDE  (P12293    ), QEDH_PSEAE  (Q9Z4J7    ), QEDH_PSEPU  (A8R3S4    ), 
QUIA_ACIAD  (Q59086    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 10 sequences 

BDH_THABB   (Q9AF95    ), BOH_THABB   (Q9AGW3    ), DHM1_METME  (P38539    ), 

PVADH_PSESP (P77931    ), QGDA_PSEPU  (Q4W6G0    ), QHED_COMTE  (Q46444    ), 
QHED_PSEPU  (Q8GR64    ), QUIA_XANCJ  (Q9XD78    ), SLDA_GLUOX  (Q70JN9    ), 
SLDA_GLUTH  (Q8KIL1    )
» more

PDB
[Detailed view]		 5 PDB

1FLG; 1H4I; 1H4J; 1LRW; 1W6S

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