PROSITE entry PS00363

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General information about the entry

PURL [info]	https://purl.expasy.org/prosite/signature/PS00363
Entry name [info]	BACTERIAL_PQQ_1
Accession [info]	PS00363
Entry type [info]	PATTERN
Date [info]	01-NOV-1990 CREATED; 01-DEC-2004 DATA UPDATE; 29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC00375

Name and characterization of the entry

Description [info]	Bacterial quinoprotein dehydrogenases signature 1.
Pattern [info]	[DEN]-[WV]-x(3)-G-[RKNM]-x(6)-[FYW]-[SV]-x(4)-[LIVM]-N-x(2)-N-V-x(2)-L- [RKT].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.

Total number of hits	14 in 14 different sequences
Number of true positive hits	14 in 14 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	15
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	48.28 %

Comments [info]

Taxonomic range [info]	Prokaryotes (Bacteria)
Maximum number of repetitions [info]	1
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences

14 sequences

ADHA_ACEAC  (P18278), ADHA_GLUOX  (O05542), ADHA_GLUPO  (P28036),

ADHA_KOMEU  (Q44002), DHGA_ACICA  (P05465), DHG_ECOLI   (P15877), 
DHG_GLUOX   (P27175), DHM1_METEA  (P16027), DHM1_METOR  (P15279), 
DHM1_PARDE  (P12293), PEDE_PSEPK  (Q88JH5), QEDH_PSEAE  (Q9Z4J7), 
QEDH_PSEPU  (A8R3S4), QUIA_ACIAD  (Q59086)

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Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
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Retrieve the sequence logo from the alignment

UniProtKB/Swiss-Prot
False negative sequences

15 sequences

BDH_THABB   (Q9AF95), BOH_THABB   (Q9AGW3), DHM1_METME  (P38539),

EXAF_METEA  (C5AXV8), PEDH_PSEPK  (Q88JH0), PVADH_PSESP (P77931), 
QGDA_PSEPU  (Q4W6G0), QHED_COMTE  (Q46444), QHED_PSEPU  (Q8GR64), 
QUIA_XANCJ  (Q9XD78), SLDA_GLUOX  (Q70JN9), SLDA_GLUTH  (Q8KIL1), 
XOXF1_METEA (C5B120), XOXF_METBY  (A0A3F2YLY8), XOXF_METFB  (I0JWN7)

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PDB
[Detailed view]

6 PDB

1FLG; 1H4I; 1H4J; 1LRW; 1W6S; 8GY2