PROSITE entry PS00363
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General information about the entry
| Entry name [info] | BACTERIAL_PQQ_1 |
| Accession [info] | PS00363 |
| Entry type [info] | PATTERN |
| Date [info] |
01-NOV-1990 CREATED;
01-DEC-2004 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00375 |
Name and characterization of the entry
| Description [info] | Bacterial quinoprotein dehydrogenases signature 1. |
| Pattern [info] |
[DEN]-[WV]-x(3)-G-[RKNM]-x(6)-[FYW]-[SV]-x(4)-[LIVM]-N-x(2)-N-V-x(2)-L- [RKT]. |
Numerical results [info]
| Total number of hits | 14 in 14 different sequences |
| Number of true positive hits | 14 in 14 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 13 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 51.85 % |
Comments [info]
| Taxonomic range [info] | Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
14 sequences
ADHA_ACEAC (P18278), ADHA_GLUOX (O05542), ADHA_GLUPO (P28036), ADHA_KOMEU (Q44002), DHGA_ACICA (P05465), DHG_ECOLI (P15877), DHG_GLUOX (P27175), DHM1_METEA (P16027), DHM1_METOR (P15279), DHM1_PARDE (P12293), PEDE_PSEPK (Q88JH5), QEDH_PSEAE (Q9Z4J7), QEDH_PSEPU (A8R3S4), QUIA_ACIAD (Q59086)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
13 sequences
BDH_THABB (Q9AF95), BOH_THABB (Q9AGW3), DHM1_METME (P38539), EXAF_METEA (C5AXV8), PEDH_PSEPK (Q88JH0), PVADH_PSESP (P77931), QGDA_PSEPU (Q4W6G0), QHED_COMTE (Q46444), QHED_PSEPU (Q8GR64), QUIA_XANCJ (Q9XD78), SLDA_GLUOX (Q70JN9), SLDA_GLUTH (Q8KIL1), XOXF1_METEA (C5B120)» more |
| PDB [Detailed view] |
6 PDB
1FLG; 1H4I; 1H4J; 1LRW; 1W6S; 8GY2 |