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Entry: PS00379

General information about the entry

Entry name [info] CDP_ALCOHOL_P_TRANSF
Accession [info] PS00379
Entry type [info] PATTERN
Date [info] 01-NOV-1990 CREATED;
01-DEC-2004 DATA UPDATE;
13-NOV-2019 INFO UPDATE.
PROSITE Doc. [info] PDOC00321

Name and characterization of the entry

Description [info] CDP-alcohol phosphatidyltransferases signature.
Pattern [info]
D-G-x(2)-A-R-x(7,8)-G-x(3)-D-x(3)-D.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2019_10 which contains 561'356 sequence entries.


Total number of hits 126 in 126 different sequences
Number of true positive hits 125 in 125 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 6
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 99.21 %
Recall (true positives / (true positives + false negatives)) 95.42 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
125 sequences

AAPT1_ARATH (O82567    ), AAPT2_ARATH (O82568    ), AIPS_AERPE  (Q9YBS3    ), 
AIPS_METTH  (O27726    ), AIPS_PYRHO  (O58215    ), AIPS_SACS2  (Q7LXU6    ), 
CAPTA_DICDI (Q55AQ3    ), CAPTB_DICDI (Q54XM0    ), CAPTC_DICDI (Q550W1    ), 
CAPTD_DICDI (Q8T2Q6    ), CDIPT_DROME (Q8SX37    ), CDIPT_HUMAN (O14735    ), 
CDIPT_MOUSE (Q8VDP6    ), CDIPT_RAT   (P70500    ), CEPT1_CHICK (Q5ZKD1    ), 
CEPT1_HUMAN (Q9Y6K0    ), CEPT1_MOUSE (Q8BGS7    ), CEPT1_RAT   (Q6AXM5    ), 
CEPT1_XENLA (Q7ZYQ3    ), CEPT1_XENTR (Q28H54    ), CHPT1_BOVIN (Q1LZE6    ), 
CHPT1_CHICK (Q5ZHQ5    ), CHPT1_DANRE (Q7ZW02    ), CHPT1_HUMAN (Q8WUD6    ), 
CHPT1_MOUSE (Q8C025    ), CHPT1_RAT   (Q66H21    ), CHPT1_XENLA (Q4KLV1    ), 
CLS_ARATH   (Q93YW7    ), CLS_ORYSJ   (Q8H8U0    ), CPT1_YEAST  (P17898    ), 
CRD1_YEAST  (Q07560    ), CRLS_MYCBO  (P63754    ), CRLS_MYCTO  (P9WPG4    ), 
CRLS_MYCTU  (P9WPG5    ), DIPPS_AQUAE (O67379    ), DIPPS_ARCFU (O29976    ), 
DIPPS_PYRFU (Q8U1Z6    ), DIPPS_RUBXD (Q1AWQ0    ), DIPPS_THEKO (Q5JDA9    ), 
EPT1_BOVIN  (Q17QM4    ), EPT1_HUMAN  (Q9C0D9    ), EPT1_MOUSE  (Q80TA1    ), 
EPT1_PONAB  (Q5NV96    ), EPT1_YEAST  (P22140    ), PGPS1_ARATH (O80952    ), 
PGPS1_ORYSJ (Q5N9A1    ), PGPS2_ARATH (Q9M2W3    ), PGSA_AQUAE  (O67908    ), 
PGSA_BACSU  (P46322    ), PGSA_BLOFL  (Q7VR12    ), PGSA_BLOPB  (Q492P7    ), 
PGSA_ECO57  (P0ABG0    ), PGSA_ECOK1  (A1AC64    ), PGSA_ECOL5  (Q0TGS6    ), 
PGSA_ECOL6  (P0ABF9    ), PGSA_ECOLI  (P0ABF8    ), PGSA_ECOUT  (Q1RAM8    ), 
PGSA_HAEIN  (P44528    ), PGSA_MYCGE  (P47360    ), PGSA_MYCPN  (P75520    ), 
PGSA_MYCTO  (P9WPG2    ), PGSA_MYCTU  (P9WPG3    ), PGSA_PECAS  (Q6D364    ), 
PGSA_PHOLL  (Q7N5C8    ), PGSA_PSEFL  (P45419    ), PGSA_RHOS4  (Q3IYX7    ), 
PGSA_RICBR  (Q1RKM3    ), PGSA_RICCN  (Q92JJ2    ), PGSA_RICFE  (Q4UN77    ), 
PGSA_RICPR  (Q9ZE96    ), PGSA_RICTY  (Q68XS5    ), PGSA_SALCH  (Q57N57    ), 
PGSA_SALPA  (Q5PI18    ), PGSA_SALTI  (Q8XFD0    ), PGSA_SALTY  (Q7CQB9    ), 
PGSA_SHIBS  (Q322L9    ), PGSA_SHIDS  (Q32HD9    ), PGSA_SHIF8  (Q0T3L5    ), 
PGSA_SHIFL  (Q83R47    ), PGSA_SHISS  (Q3Z2T6    ), PGSA_SODGM  (Q2NTS8    ), 
PGSA_STAAC  (Q5HGE8    ), PGSA_STAAM  (P63755    ), PGSA_STAAN  (P63756    ), 
PGSA_STAAR  (Q6GHF2    ), PGSA_STAAS  (Q6G9T0    ), PGSA_STAAW  (P63757    ), 
PGSA_STAEQ  (Q5HPQ8    ), PGSA_STAES  (Q8CPF7    ), PGSA_TREPA  (O66076    ), 
PGSA_WIGBR  (Q8D2N9    ), PGSA_YERE8  (A1JLU9    ), PGSA_YERPA  (Q1C8L0    ), 
PGSA_YERPE  (Q8ZF51    ), PGSA_YERPN  (Q1CHE5    ), PGSA_YERPP  (A4TK40    ), 
PGSA_YERPS  (Q66BN4    ), PIPS_CORGL  (Q8NPZ2    ), PIPS_CUTAK  (Q6A8U1    ), 
PIPS_MYCA9  (B1MCK4    ), PIPS_MYCBP  (A0A0H3MFZ3), PIPS_MYCMM  (B2HM76    ), 
PIPS_MYCS2  (Q9F7Y9    ), PIPS_MYCTO  (P9WPG6    ), PIPS_MYCTU  (P9WPG7    ), 
PIPS_STRAW  (Q827U4    ), PIS1_ARATH  (Q8LBA6    ), PIS2_ARATH  (Q8GUK6    ), 
PIS_SCHPO   (Q10153    ), PIS_YEAST   (P06197    ), PSS_BACSU   (P39823    ), 
PSS_ENCCU   (Q95ZE2    ), PSS_HELPJ   (Q9ZM68    ), PSS_HELPY   (Q48269    ), 
PSS_METJA   (Q58609    ), PSS_MYCBO   (P59949    ), PSS_MYCLE   (Q9ZBM2    ), 
PSS_MYCTO   (P9WPG0    ), PSS_MYCTU   (P9WPG1    ), PSS_SCHPO   (O94584    ), 
PSS_YEAST   (P08456    ), Y1480_AQUAE (O67456    ), YF38_SCHPO  (O13899    ), 
YF3A_SCHPO  (O13901    ), YNJF_ECOLI  (P76226    )
» more

UniProtKB/Swiss-Prot
False negative sequences
6 sequences

CPESY_DROME (O77475    ), CRLS1_CAEEL (O01916    ), CRLS1_DROME (Q8MZC4    ), 
CRLS1_HUMAN (Q9UJA2    ), CRLS1_MOUSE (Q80ZM8    ), CRLS1_RAT   (Q5U2V5    )
» more

UniProtKB/Swiss-Prot
False positive sequences
1 sequence

RIFK_HALSA  (Q9HNF4    )

		
PDB
[Detailed view]
4 PDB

4MND; 6H53; 6H59; 6H5A

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