Home  |  Contact
Entry: PS00400

General information about the entry

Entry name [info] LBP_BPI_CETP
Accession [info] PS00400
Entry type [info] PATTERN
Date [info] 01-NOV-1990 CREATED;
01-DEC-2004 DATA UPDATE;
13-FEB-2019 INFO UPDATE.
PROSITE Doc. [info] PDOC00367

Name and characterization of the entry

Description [info] LBP / BPI / CETP family signature.
Pattern [info]
[PA]-[GA]-[LIVMC]-x(2)-R-[IV]-[ST]-x(3)-L-x(5)-[EQAV]-x(4)-[LIVM]-[EQK]-
x(8)-P.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2019_02 which contains 559'228 sequence entries.


Total number of hits 15 in 15 different sequences
Number of true positive hits 15 in 15 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 15
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 50.00 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
15 sequences

BPIFC_HUMAN (Q8NFQ6    ), BPIFC_MOUSE (Q8C186    ), BPI_BOVIN   (P17453    ), 
BPI_HUMAN   (P17213    ), CETP_CRIGR  (G3HIK4    ), CETP_HUMAN  (P11597    ), 
CETP_MACFA  (P47896    ), CETP_RABIT  (P22687    ), LBP_BOVIN   (Q2TBI0    ), 
LBP_HUMAN   (P18428    ), LBP_MOUSE   (Q61805    ), LBP_RABIT   (P17454    ), 
LBP_RAT     (Q63313    ), PLTP_HUMAN  (P55058    ), PLTP_MOUSE  (P55065    )
» more

UniProtKB/Swiss-Prot
False negative sequences
15 sequences

BPIB2_HUMAN (Q8N4F0    ), BPIB2_MOUSE (Q8C1E1    ), BPIB3_HUMAN (P59826    ), 
BPIB3_MOUSE (Q80ZU7    ), BPIB3_RAT   (Q05701    ), BPIB4_HUMAN (P59827    ), 
BPIB4_MOUSE (A2BGH0    ), BPIB4_RAT   (Q05704    ), BPIB6_HUMAN (Q8NFQ5    ), 
BPIB6_MOUSE (Q8BU51    ), BPI_MOUSE   (Q67E05    ), BPI_RAT     (Q6AXU0    ), 
LATH_HORSE  (P82615    ), NRF5_CAEEL  (Q93796    ), YSV5_CAEEL  (Q10011    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences
2 sequences

BPI_RABIT   (Q28739    ), CETP_MESAU  (P25914    )

		
PDB
[Detailed view]
6 PDB

1BP1; 1EWF; 2OBD; 4EWS; 4F2A; 4M4D

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission