PROSITE entry PS00400
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General information about the entry
Entry name [info] | LBP_BPI_CETP |
Accession [info] | PS00400 |
Entry type [info] | PATTERN |
Date [info] |
01-NOV-1990 CREATED;
01-DEC-2004 DATA UPDATE; 08-NOV-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00367 |
Name and characterization of the entry
Description [info] | LBP / BPI / CETP family signature. |
Pattern [info] |
[PA]-[GA]-[LIVMC]-x(2)-R-[IV]-[ST]-x(3)-L-x(5)-[EQAV]-x(4)-[LIVM]-[EQK]- x(8)-P. |
Numerical results [info]
Total number of hits | 15 in 15 different sequences |
Number of true positive hits | 15 in 15 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 15 |
Number of 'partial' sequences | 2 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 50.00 % |
Comments [info]
Taxonomic range [info] | Eukaryotes |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
15 sequences
BPIFC_HUMAN (Q8NFQ6), BPIFC_MOUSE (Q8C186), BPI_BOVIN (P17453), BPI_HUMAN (P17213), CETP_CRIGR (G3HIK4), CETP_HUMAN (P11597), CETP_MACFA (P47896), CETP_RABIT (P22687), LBP_BOVIN (Q2TBI0), LBP_HUMAN (P18428), LBP_MOUSE (Q61805), LBP_RABIT (P17454), LBP_RAT (Q63313), PLTP_HUMAN (P55058), PLTP_MOUSE (P55065)» more
|
UniProtKB/Swiss-Prot False negative sequences |
15 sequences
BPIB2_HUMAN (Q8N4F0), BPIB2_MOUSE (Q8C1E1), BPIB3_HUMAN (P59826), BPIB3_MOUSE (Q80ZU7), BPIB3_RAT (Q05701), BPIB4_HUMAN (P59827), BPIB4_MOUSE (A2BGH0), BPIB4_RAT (Q05704), BPIB6_HUMAN (Q8NFQ5), BPIB6_MOUSE (Q8BU51), BPI_MOUSE (Q67E05), BPI_RAT (Q6AXU0), LATH_HORSE (P82615), NRF5_CAEEL (Q93796), YSV5_CAEEL (Q10011)» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
2 sequences
BPI_RABIT (Q28739), CETP_MESAU (P25914) |
PDB [Detailed view] |
6 PDB
1BP1; 1EWF; 2OBD; 4EWS; 4F2A; 4M4D |