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Entry: PS00417

General information about the entry

Entry name [info] SYNAPTOBREVIN
Accession [info] PS00417
Entry type [info] PATTERN
Date [info] 01-NOV-1990 CREATED;
01-APR-2006 DATA UPDATE;
22-FEB-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00368

Name and characterization of the entry

Description [info] Synaptobrevin signature.
Pattern [info] 
[NT]-[LIVMF]-[DENSTG]-[KLNRGS]-[VAI]-x-[DEQA]-R-x(2)-[KRN]-[LIVM]-
[STDEA]-x-[LIVM]-x-[DEQGN]-[KR]-[TAS]-[DEAS].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_01 which contains 569'213 sequence entries.


Total number of hits 62 in 62 different sequences
Number of true positive hits 62 in 62 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 22
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 73.81 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 62 sequences 

NSYB_DROME  (Q9W0C1    ), SNC1_YEAST  (P31109    ), SNC2_YEAST  (P33328    ), 

SYB1_CAEBR  (Q60WU2    ), SYB1_CAEEL  (O02495    ), SYB1_SCHPO  (Q92356    ), 
SYBL_SCHMA  (Q27236    ), SYB_APLCA   (P35589    ), SYB_DORPE   (P47194    ), 
SYB_DROME   (P18489    ), SYB_TETCF   (P13701    ), VA711_ARATH (O49377    ), 
VA712_ARATH (Q9SIQ9    ), VA713_ARATH (Q9LFP1    ), VA714_ARATH (Q9FMR5    ), 
VA721_ARATH (Q9ZTW3    ), VA722_ARATH (P47192    ), VA724_ARATH (O23429    ), 
VA725_ARATH (O48850    ), VA726_ARATH (Q9MAS5    ), VA727_ARATH (Q9M376    ), 
VAMP1_BOVIN (Q0V7N0    ), VAMP1_HUMAN (P23763    ), VAMP1_MOUSE (Q62442    ), 
VAMP1_RAT   (Q63666    ), VAMP2_BOVIN (P63026    ), VAMP2_HUMAN (P63027    ), 
VAMP2_MACMU (Q9N0Y0    ), VAMP2_MOUSE (P63044    ), VAMP2_RAT   (P63045    ), 
VAMP2_XENLA (P47193    ), VAMP3_BOVIN (Q2KJD2    ), VAMP3_HUMAN (Q15836    ), 
VAMP3_MACFA (Q4R8T0    ), VAMP3_MOUSE (P63024    ), VAMP3_RAT   (P63025    ), 
VAMP4_BOVIN (Q32L97    ), VAMP4_HUMAN (O75379    ), VAMP4_MOUSE (O70480    ), 
VAMP5_BOVIN (Q2KHY2    ), VAMP5_HUMAN (O95183    ), VAMP5_MOUSE (Q9Z2P8    ), 
VAMP5_RAT   (Q9Z2J5    ), VAMP7_BOVIN (Q17QI5    ), VAMP7_CHICK (Q5ZL74    ), 
VAMP7_HUMAN (P51809    ), VAMP7_MOUSE (P70280    ), VAMP7_PONAB (Q5RF94    ), 
VAMP7_RAT   (Q9JHW5    ), VAMP8_BOVIN (Q3T0Y8    ), VAMP8_HUMAN (Q9BV40    ), 
VAMP8_PONAB (Q5REQ5    ), VAMP8_RAT   (Q9WUF4    ), YKT61_ARATH (Q9ZRD6    ), 
YKT62_ARATH (Q9LVM9    ), YKT6_ASHGO  (Q757A4    ), YKT6_CANGB  (Q6FW27    ), 
YKT6_DEBHA  (Q6BSL0    ), YKT6_KLULC  (Q6CSA2    ), YKT6_SCHPO  (O60073    ), 
YKT6_YARLI  (Q6C537    ), YKT6_YEAST  (P36015    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 22 sequences 

SC221_ARATH (Q94AU2    ), SEC22_ASHGO (Q74ZD2    ), SEC22_CANGB (Q6FWT0    ), 

SEC22_KLULC (Q6CJA0    ), SEC22_SCHPO (Q9Y7L0    ), SEC22_YARLI (Q6C880    ), 
SEC22_YEAST (P22214    ), SYBA_DICDI  (Q6TMJ9    ), SYBB_DICDI  (Q54GB3    ), 
VA723_ARATH (Q8VY69    ), VAM7A_DICDI (Q54NW7    ), VAM7B_DICDI (Q86AQ7    ), 
VAMP8_MOUSE (O70404    ), YKT6A_XENLA (Q6DDU7    ), YKT6B_XENLA (Q32N70    ), 
YKT6_BOVIN  (Q3T000    ), YKT6_DANRE  (Q7ZUN8    ), YKT6_DICDI  (Q54ES8    ), 
YKT6_HUMAN  (O15498    ), YKT6_MOUSE  (Q9CQW1    ), YKT6_RAT    (Q5EGY4    ), 
YKT6_XENTR  (Q6P816    )
» more

PDB
[Detailed view]		 30 PDB

1GL2; 1KIL; 1L4A; 1N7S; 1SFC; 2KOG; 2N1T; 2NPS; 3B5N; 3HD7; 3IPD; 3J96; 3J97; 3J98; 3J99; 4B93; 4WY4; 5CCG; 5CCH; 5CCI; 5KJ7; 5KJ8; 6IP1; 6MDM; 6MDN; 6MTI; 6WVW; 7BV6; 7UDB; 7UDC
» more

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