PROSITE entry PS00417
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General information about the entry
| Entry name [info] | SYNAPTOBREVIN |
| Accession [info] | PS00417 |
| Entry type [info] | PATTERN |
| Date [info] |
01-NOV-1990 CREATED;
01-APR-2006 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00368 |
Name and characterization of the entry
| Description [info] | Synaptobrevin signature. |
| Pattern [info] |
[NT]-[LIVMF]-[DENSTG]-[KLNRGS]-[VAI]-x-[DEQA]-R-x(2)-[KRN]-[LIVM]- [STDEA]-x-[LIVM]-x-[DEQGN]-[KR]-[TAS]-[DEAS]. |
Numerical results [info]
| Total number of hits | 62 in 62 different sequences |
| Number of true positive hits | 62 in 62 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 22 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 73.81 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 2 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
62 sequences
NSYB_DROME (Q9W0C1), SNC1_YEAST (P31109), SNC2_YEAST (P33328), SYB1_CAEBR (Q60WU2), SYB1_CAEEL (O02495), SYB1_SCHPO (Q92356), SYBL_SCHMA (Q27236), SYB_APLCA (P35589), SYB_DORPE (P47194), SYB_DROME (P18489), SYB_TETCF (P13701), VA711_ARATH (O49377), VA712_ARATH (Q9SIQ9), VA713_ARATH (Q9LFP1), VA714_ARATH (Q9FMR5), VA721_ARATH (Q9ZTW3), VA722_ARATH (P47192), VA724_ARATH (O23429), VA725_ARATH (O48850), VA726_ARATH (Q9MAS5), VA727_ARATH (Q9M376), VAMP1_BOVIN (Q0V7N0), VAMP1_HUMAN (P23763), VAMP1_MOUSE (Q62442), VAMP1_RAT (Q63666), VAMP2_BOVIN (P63026), VAMP2_HUMAN (P63027), VAMP2_MACMU (Q9N0Y0), VAMP2_MOUSE (P63044), VAMP2_RAT (P63045), VAMP2_XENLA (P47193), VAMP3_BOVIN (Q2KJD2), VAMP3_HUMAN (Q15836), VAMP3_MACFA (Q4R8T0), VAMP3_MOUSE (P63024), VAMP3_RAT (P63025), VAMP4_BOVIN (Q32L97), VAMP4_HUMAN (O75379), VAMP4_MOUSE (O70480), VAMP5_BOVIN (Q2KHY2), VAMP5_HUMAN (O95183), VAMP5_MOUSE (Q9Z2P8), VAMP5_RAT (Q9Z2J5), VAMP7_BOVIN (Q17QI5), VAMP7_CHICK (Q5ZL74), VAMP7_HUMAN (P51809), VAMP7_MOUSE (P70280), VAMP7_PONAB (Q5RF94), VAMP7_RAT (Q9JHW5), VAMP8_BOVIN (Q3T0Y8), VAMP8_HUMAN (Q9BV40), VAMP8_PONAB (Q5REQ5), VAMP8_RAT (Q9WUF4), YKT61_ARATH (Q9ZRD6), YKT62_ARATH (Q9LVM9), YKT6_CANGA (Q6FW27), YKT6_DEBHA (Q6BSL0), YKT6_EREGS (Q757A4), YKT6_KLULA (Q6CSA2), YKT6_SCHPO (O60073), YKT6_YARLI (Q6C537), YKT6_YEAST (P36015)» more
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| UniProtKB/Swiss-Prot False negative sequences |
22 sequences
SC221_ARATH (Q94AU2), SEC22_CANGA (Q6FWT0), SEC22_EREGS (Q74ZD2), SEC22_KLULA (Q6CJA0), SEC22_SCHPO (Q9Y7L0), SEC22_YARLI (Q6C880), SEC22_YEAST (P22214), SYBA_DICDI (Q6TMJ9), SYBB_DICDI (Q54GB3), VA723_ARATH (Q8VY69), VAM7A_DICDI (Q54NW7), VAM7B_DICDI (Q86AQ7), VAMP8_MOUSE (O70404), YKT6A_XENLA (Q6DDU7), YKT6B_XENLA (Q32N70), YKT6_BOVIN (Q3T000), YKT6_DANRE (Q7ZUN8), YKT6_DICDI (Q54ES8), YKT6_HUMAN (O15498), YKT6_MOUSE (Q9CQW1), YKT6_RAT(Q5EGY4), YKT6_XENTR (Q6P816)» more |
| PDB [Detailed view] |
30 PDB
1GL2; 1KIL; 1L4A; 1N7S; 1SFC; 2KOG; 2N1T; 2NPS; 3B5N; 3HD7; 3IPD; 3J96; 3J97; 3J98; 3J99; 4B93; 4WY4; 5CCG; 5CCH; 5CCI; 5KJ7; 5KJ8; 6IP1; 6MDM; 6MDN; 6MTI; 6WVW; 7BV6; 7UDB; 7UDC » more |