Home  |  Contact
Entry: PS00434

General information about the entry

Entry name [info] HSF_DOMAIN
Accession [info] PS00434
Entry type [info] PATTERN
Date [info] 01-MAY-1991 CREATED;
01-NOV-1997 DATA UPDATE;
13-NOV-2019 INFO UPDATE.
PROSITE Doc. [info] PDOC00381

Name and characterization of the entry

Description [info] HSF-type DNA-binding domain signature.
Pattern [info] 
L-x(3)-[FY]-K-H-x-N-x-[STAN]-S-F-[LIVM]-R-Q-L-[NH]-x-Y-x-[FYW]-[RKH]-K-
[LIVM].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2019_10 which contains 561'356 sequence entries.


Total number of hits 73 in 73 different sequences
Number of true positive hits 73 in 73 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 11
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 86.90 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 73 sequences 

HFA1A_ARATH (P41151    ), HFA1B_ARATH (O81821    ), HFA1D_ARATH (Q9LQM7    ), 

HFA1E_ARATH (Q9SCW5    ), HFA2A_ORYSJ (Q84MN7    ), HFA2B_ORYSJ (Q6VBB2    ), 
HFA2C_ORYSJ (Q338B0    ), HFA2D_ORYSJ (Q8H7Y6    ), HFA2E_ORYSJ (Q6F388    ), 
HFA4B_ORYSJ (Q94J16    ), HFA4C_ARATH (Q9FK72    ), HFA4D_ORYSJ (Q93VB5    ), 
HFA6A_ARATH (Q1PDN3    ), HFA6A_ORYSJ (Q5Z6A4    ), HFA6B_ARATH (Q9LUH8    ), 
HFA6B_ORYSJ (Q657C0    ), HFA7A_ARATH (Q9SV12    ), HFA7B_ARATH (Q9M1V5    ), 
HFB2A_ARATH (Q9SCW4    ), HFB2A_ORYSJ (Q7XRX3    ), HFB2B_ARATH (Q9T0D3    ), 
HFB2B_ORYSJ (Q6Z9C8    ), HFB2C_ORYSJ (Q652B0    ), HFB4A_ORYSJ (Q6Z9R8    ), 
HFB4B_ORYSJ (Q7XHZ0    ), HFB4C_ORYSJ (Q67U94    ), HFB4D_ORYSJ (Q10KX8    ), 
HFC1A_ORYSJ (Q6VBA4    ), HFC1B_ORYSJ (Q942D6    ), HFC2A_ORYSJ (Q6EUG4    ), 
HFC2B_ORYSJ (Q0DBL6    ), HSF1_BOVIN  (Q08DJ8    ), HSF1_CHICK  (P38529    ), 
HSF1_HUMAN  (Q00613    ), HSF1_MOUSE  (P38532    ), HSF24_SOLPE (P22335    ), 
HSF2_CHICK  (P38530    ), HSF2_HUMAN  (Q03933    ), HSF2_MOUSE  (P38533    ), 
HSF30_SOLPE (P41152    ), HSF3_CHICK  (P38531    ), HSF4_CANLF  (Q1HGE8    ), 
HSF4_HUMAN  (Q9ULV5    ), HSF4_MOUSE  (Q9R0L1    ), HSF8_SOLLC  (Q40152    ), 
HSF8_SOLPE  (P41153    ), HSFA1_ORYSJ (Q84T61    ), HSFA2_ARATH (O80982    ), 
HSFA3_ARATH (Q8GYY1    ), HSFA3_ORYSJ (Q6H6Q7    ), HSFA5_ARATH (Q94BZ5    ), 
HSFA5_ORYSJ (Q6K6S5    ), HSFA8_ARATH (Q9S7U5    ), HSFA9_ARATH (Q9LVW2    ), 
HSFA9_ORYSJ (Q10PR4    ), HSFB1_ORYSJ (Q67TP9    ), HSFB3_ARATH (O22230    ), 
HSFB4_ARATH (Q9C635    ), HSFC1_ARATH (Q9LV52    ), HSF_CANAL   (Q5AQ33    ), 
HSF_DROME   (P22813    ), HSF_KLULA   (P22121    ), HSF_SCHPO   (Q02953    ), 
HSF_XENLA   (P41154    ), HSF_YEAST   (P10961    ), MGA1_YEAST  (P53050    ), 
PRR1_SCHPO  (O14283    ), SFL1_CANAL  (Q5A287    ), SFL1_YEAST  (P20134    ), 
SFL2_CANAL  (Q5AK51    ), SKN7_CANAL  (Q5A4X5    ), SKN7_CHATD  (G0SB31    ), 
SKN7_YEAST  (P38889    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 11 sequences 

HFA4A_ARATH (O49403    ), HMS2_YEAST  (P47175    ), HSF3_MOUSE  (D0VYS2    ), 

HSF5_HUMAN  (Q4G112    ), HSF5_MOUSE  (Q5ND04    ), HSFB1_ARATH (Q96320    ), 
HSFX1_HUMAN (Q9UBD0    ), HSFY1_HUMAN (Q96LI6    ), HSF_ENCCU   (Q8SS62    ), 
HSF_ENTBH   (B7XIV9    ), HSF_NOSCE   (C4V6H6    )
» more

PDB
[Detailed view]		 21 PDB

1FBQ; 1FBS; 1FBU; 1FYK; 1FYL; 1FYM; 1HKS; 1HKT; 2HTS; 2LDU; 3HSF; 3HTS; 5D5U; 5D5V; 5D5W; 5D5X; 5D8K; 5D8L; 5HDG; 5HDK; 5HDN
» more

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission