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Entry: PS00451

General information about the entry

Entry name [info] PATHOGENESIS_BETVI
Accession [info] PS00451
Entry type [info] PATTERN
Date [info] 01-MAY-1991 CREATED;
01-DEC-2004 DATA UPDATE;
12-AUG-2020 INFO UPDATE.
PROSITE Doc. [info] PDOC00437

Name and characterization of the entry

Description [info] Pathogenesis-related proteins Bet v I family signature.
Pattern [info] 
G-x(2)-[LIVMF]-x(4)-E-x(2,3)-[CSTAENV]-x(8,9)-[GNDS]-[GS](2)-[CS]-x(2)-
[KT]-x(4)-[FY].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2020_04 which contains 563'082 sequence entries.


Total number of hits 54 in 54 different sequences
Number of true positive hits 52 in 52 different sequences
Number of 'unknown' hits 0
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 14
Number of 'partial' sequences 9
Precision (true positives / (true positives + false positives)) 96.30 %
Recall (true positives / (true positives + false negatives)) 78.79 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 52 sequences 

ABR17_PEA   (Q06931    ), ABR18_PEA   (Q06930    ), ALL1_APIGR  (P49372    ), 

ALL2_APIGR  (P92918    ), BEV1A_BETPN (P15494    ), BEV1B_BETPN (P45431    ), 
BEV1C_BETPN (P43176    ), BEV1D_BETPN (P43177    ), BEV1E_BETPN (P43178    ), 
BEV1F_BETPN (P43179    ), BEV1G_BETPN (P43180    ), BEV1J_BETPN (P43183    ), 
BEV1K_BETPN (P43184    ), BEV1L_BETPN (P43185    ), BEV1M_BETPN (P43186    ), 
DAU1_DAUCA  (O04298    ), DRR1_PEA    (P13239    ), DRR3_PEA    (P14710    ), 
DRR4_PEA    (P27047    ), FRA12_FRAAN (D0E0C6    ), FRA13_FRAAN (D0E0C7    ), 
FRA14_FRAAN (A0A024B3D0), FRA15_FRAAN (A0A024B404), FRA16_FRAAN (A0A024B3G5), 
FRA17_FRAAN (A0A024B4E4), FRA18_FRAAN (A0A024B2V6), L18A_LUPLU  (P52778    ), 
L18B_LUPLU  (P52779    ), MAL11_MALDO (P43211    ), MAL12_MALDO (Q40280    ), 
MPAC1_CARBE (P38949    ), MPAC1_CORAV (Q08407    ), MPAC2_CARBE (P38950    ), 
MPAG1_ALNGL (P38948    ), PR101_MEDTR (P93333    ), PR10_SOYBN  (E6YBW4    ), 
PR11_PETCR  (P19417    ), PR13_PETCR  (P19418    ), PR1_ASPOF   (Q05736    ), 
PR1_MEDSA   (Q43560    ), PR1_PHAVU   (P25985    ), PR2_PETCR   (P27538    ), 
PR2_PHAVU   (P25986    ), PRS1_SOLTU  (P17641    ), PRS2_SOLTU  (P17642    ), 
PRU1_PRUAR  (O50001    ), PRU1_PRUAV  (O24248    ), PYRC1_PYRCO (O65200    ), 
RAP_TAROF   (O49065    ), RNS1_PANGI  (P80889    ), RNS2_PANGI  (P80890    ), 
SAM22_SOYBN (P26987    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 14 sequences 

FRA1A_FRAAN (Q5ULZ4    ), FRA1B_FRAAN (Q256S7    ), FRA1C_FRAAN (Q256S4    ), 

FRA1D_FRAAN (Q256S6    ), FRA1E_FRAAN (Q256S2    ), KIRO_ACTDE  (P85524    ), 
NOD13_MEDTR (P93330    ), P102A_LUPLU (Q9LLQ3    ), P102B_LUPLU (Q9LLQ2    ), 
P102C_LUPLU (Q9AXK2    ), P102D_LUPLU (Q9AXK1    ), P102E_LUPLU (Q7Y1W5    ), 
P102F_LUPLU (Q7XZT8    ), PHBP_MEDTR  (G7J032    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 9 sequences 

DRR_PSEMZ   (P85900    ), PL1_LUPLU   (P83363    ), PL2_LUPLU   (P83364    ), 

PL3_LUPLU   (P83365    ), PL4_LUPLU   (P83366    ), PL5_LUPLU   (P83367    ), 
PL6_LUPLU   (P83368    ), PRP_CAPAA   (P86077    ), QUA1_QUEAL  (P85126    )
» more

UniProtKB/Swiss-Prot
False positive sequences		 2 sequences 

NEP1_NEPDI  (P69476    ), PLB1_MONDO  (Q06HQ7    )


				
	

	

		PDB
[Detailed view]		
		
			45 PDB
			


			1B6F; 1BTV; 1BV1; 1E09; 1FM4; 1FSK; 1H2O; 1ICX; 1IFV; 1LLT; 1QMR; 2BK0; 
			
				2K7H; 2WQL; 4A80; 4A81; 4A83; 4A84; 4A85; 4A86; 4A87; 4A88; 4A8G; 4A8U; 
				4A8V; 4B9R; 4BK6; 4BK7; 4BKC; 4BKD; 4BTZ; 4C94; 4MNS; 4QIP; 4RYV; 4Y31; 
				4Z3L; 5AMW; 5C9Y; 5MMU; 6R3C; 6ST8; 6ST9; 6STA; 6STB
			
			

			» more

				
	





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