PROSITE entry PS00451
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General information about the entry
Entry name [info] | PATHOGENESIS_BETVI |
Accession [info] | PS00451 |
Entry type [info] | PATTERN |
Date [info] |
01-MAY-1991 CREATED;
01-DEC-2004 DATA UPDATE; 08-NOV-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00437 |
Name and characterization of the entry
Description [info] | Pathogenesis-related proteins Bet v I family signature. |
Pattern [info] |
G-x(2)-[LIVMF]-x(4)-E-x(2,3)-[CSTAENV]-x(8,9)-[GNDS]-[GS](2)-[CS]-x(2)- [KT]-x(4)-[FY]. |
Numerical results [info]
Total number of hits | 56 in 56 different sequences |
Number of true positive hits | 54 in 54 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 2 in 2 different sequences |
Number of false negative sequences | 15 |
Number of 'partial' sequences | 9 |
Precision (true positives / (true positives + false positives)) | 96.43 % |
Recall (true positives / (true positives + false negatives)) | 78.26 % |
Comments [info]
Taxonomic range [info] | Eukaryotes |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
54 sequences
ABR17_PEA (Q06931), ABR18_PEA (Q06930), ALL1_APIGR (P49372), ALL2_APIGR (P92918), BEV1A_BETPN (P15494), BEV1B_BETPN (P45431), BEV1C_BETPN (P43176), BEV1D_BETPN (P43177), BEV1E_BETPN (P43178), BEV1F_BETPN (P43179), BEV1G_BETPN (P43180), BEV1J_BETPN (P43183), BEV1K_BETPN (P43184), BEV1L_BETPN (P43185), BEV1M_BETPN (P43186), DAU1_DAUCA (O04298), DC104_DAUCS (A0A161X1M2), DRR1_PEA(P13239), DRR3_PEA(P14710), DRR4_PEA(P27047), FRA12_FRAAN (D0E0C6), FRA13_FRAAN (D0E0C7), FRA14_FRAAN (A0A024B3D0), FRA15_FRAAN (A0A024B404), FRA16_FRAAN (A0A024B3G5), FRA17_FRAAN (A0A024B4E4), FRA18_FRAAN (A0A024B2V6), L18A_LUPLU (P52778), L18B_LUPLU (P52779), MAL11_MALDO (P43211), MAL12_MALDO (Q40280), MPAC1_CARBE (P38949), MPAC1_CORAV (Q08407), MPAC2_CARBE (P38950), MPAG1_ALNGL (P38948), PET1_PETCR (C0HKF5), PR101_MEDTR (P93333), PR10_SOYBN (E6YBW4), PR11_PETCR (P19417), PR13_PETCR (P19418), PR1_ASPOF (Q05736), PR1_MEDSA (Q43560), PR1_PHAVU (P25985), PR2_PETCR (P27538), PR2_PHAVU (P25986), PRS1_SOLTU (P17641), PRS2_SOLTU (P17642), PRU1_PRUAR (O50001), PRU1_PRUAV (O24248), PYRC1_PYRCO (O65200), RAP_TAROF (O49065), RNS1_PANGI (P80889), RNS2_PANGI (P80890), SAM22_SOYBN (P26987)» more
|
UniProtKB/Swiss-Prot False negative sequences |
15 sequences
DC103_DAUCA (D9ZHN9), FRA1A_FRAAN (Q5ULZ4), FRA1B_FRAAN (Q256S7), FRA1C_FRAAN (Q256S4), FRA1D_FRAAN (Q256S6), FRA1E_FRAAN (Q256S2), KIRO_ACTDE (P85524), NOD13_MEDTR (P93330), P102A_LUPLU (Q9LLQ3), P102B_LUPLU (Q9LLQ2), P102C_LUPLU (Q9AXK2), P102D_LUPLU (Q9AXK1), P102E_LUPLU (Q7Y1W5), P102F_LUPLU (Q7XZT8), PHBP_MEDTR (G7J032)» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
9 sequences
DRR_PSEMZ (P85900), PL1_LUPLU (P83363), PL2_LUPLU (P83364), PL3_LUPLU (P83365), PL4_LUPLU (P83366), PL5_LUPLU (P83367), PL6_LUPLU (P83368), PRP_CAPAA (P86077), QUA1_QUEAL (P85126)» more |
UniProtKB/Swiss-Prot False positive sequences |
2 sequences
NEP1_NEPDI (P69476), PLB1_MONDO (Q06HQ7) |
PDB [Detailed view] |
48 PDB
1B6F; 1BTV; 1BV1; 1E09; 1FM4; 1FSK; 1H2O; 1ICX; 1IFV; 1LLT; 1QMR; 2BK0; 2K7H; 2WQL; 4A80; 4A81; 4A83; 4A84; 4A85; 4A86; 4A87; 4A88; 4A8G; 4A8U; 4A8V; 4B9R; 4BK6; 4BK7; 4BKC; 4BKD; 4BTZ; 4C94; 4MNS; 4QIP; 4RYV; 4Y31; 4Z3L; 5AMW; 5C9Y; 5MMU; 6R3C; 6ST8; 6ST9; 6STA; 6STB; 7MXL; 7N0U; 7N0V » more |