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PROSITE entry PS00451


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General information about the entry

Entry name [info] PATHOGENESIS_BETVI
Accession [info] PS00451
Entry type [info] PATTERN
Date [info] 01-MAY-1991 CREATED;
01-DEC-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00437

Name and characterization of the entry

Description [info] Pathogenesis-related proteins Bet v I family signature.
Pattern [info]
G-x(2)-[LIVMF]-x(4)-E-x(2,3)-[CSTAENV]-x(8,9)-[GNDS]-[GS](2)-[CS]-x(2)-
[KT]-x(4)-[FY].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_03 which contains 571'609 sequence entries.


Total number of hits 56 in 56 different sequences
Number of true positive hits 54 in 54 different sequences
Number of 'unknown' hits 0
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 15
Number of 'partial' sequences 9
Precision (true positives / (true positives + false positives)) 96.43 %
Recall (true positives / (true positives + false negatives)) 78.26 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
54 sequences

ABR17_PEA   (Q06931), ABR18_PEA   (Q06930), ALL1_APIGR  (P49372), 
ALL2_APIGR  (P92918), BEV1A_BETPN (P15494), BEV1B_BETPN (P45431), 
BEV1C_BETPN (P43176), BEV1D_BETPN (P43177), BEV1E_BETPN (P43178), 
BEV1F_BETPN (P43179), BEV1G_BETPN (P43180), BEV1J_BETPN (P43183), 
BEV1K_BETPN (P43184), BEV1L_BETPN (P43185), BEV1M_BETPN (P43186), 
DAU1_DAUCA  (O04298), DC104_DAUCS (A0A161X1M2), DRR1_PEA(P13239), 
DRR3_PEA(P14710), DRR4_PEA(P27047), FRA12_FRAAN (D0E0C6), 
FRA13_FRAAN (D0E0C7), FRA14_FRAAN (A0A024B3D0), FRA15_FRAAN (A0A024B404), 
FRA16_FRAAN (A0A024B3G5), FRA17_FRAAN (A0A024B4E4), FRA18_FRAAN (A0A024B2V6), 
L18A_LUPLU  (P52778), L18B_LUPLU  (P52779), MAL11_MALDO (P43211), 
MAL12_MALDO (Q40280), MPAC1_CARBE (P38949), MPAC1_CORAV (Q08407), 
MPAC2_CARBE (P38950), MPAG1_ALNGL (P38948), PET1_PETCR  (C0HKF5), 
PR101_MEDTR (P93333), PR10_SOYBN  (E6YBW4), PR11_PETCR  (P19417), 
PR13_PETCR  (P19418), PR1_ASPOF   (Q05736), PR1_MEDSA   (Q43560), 
PR1_PHAVU   (P25985), PR2_PETCR   (P27538), PR2_PHAVU   (P25986), 
PRS1_SOLTU  (P17641), PRS2_SOLTU  (P17642), PRU1_PRUAR  (O50001), 
PRU1_PRUAV  (O24248), PYRC1_PYRCO (O65200), RAP_TAROF   (O49065), 
RNS1_PANGI  (P80889), RNS2_PANGI  (P80890), SAM22_SOYBN (P26987)
» more

UniProtKB/Swiss-Prot
False negative sequences
15 sequences

DC103_DAUCA (D9ZHN9), FRA1A_FRAAN (Q5ULZ4), FRA1B_FRAAN (Q256S7), 
FRA1C_FRAAN (Q256S4), FRA1D_FRAAN (Q256S6), FRA1E_FRAAN (Q256S2), 
KIRO_ACTDE  (P85524), NOD13_MEDTR (P93330), P102A_LUPLU (Q9LLQ3), 
P102B_LUPLU (Q9LLQ2), P102C_LUPLU (Q9AXK2), P102D_LUPLU (Q9AXK1), 
P102E_LUPLU (Q7Y1W5), P102F_LUPLU (Q7XZT8), PHBP_MEDTR  (G7J032)
» more

UniProtKB/Swiss-Prot
'Partial' sequences
9 sequences

DRR_PSEMZ   (P85900), PL1_LUPLU   (P83363), PL2_LUPLU   (P83364), 
PL3_LUPLU   (P83365), PL4_LUPLU   (P83366), PL5_LUPLU   (P83367), 
PL6_LUPLU   (P83368), PRP_CAPAA   (P86077), QUA1_QUEAL  (P85126)
» more

UniProtKB/Swiss-Prot
False positive sequences
2 sequences

NEP1_NEPDI  (P69476), PLB1_MONDO  (Q06HQ7)

		
PDB
[Detailed view]
48 PDB

1B6F; 1BTV; 1BV1; 1E09; 1FM4; 1FSK; 1H2O; 1ICX; 1IFV; 1LLT; 1QMR; 2BK0; 2K7H; 2WQL; 4A80; 4A81; 4A83; 4A84; 4A85; 4A86; 4A87; 4A88; 4A8G; 4A8U; 4A8V; 4B9R; 4BK6; 4BK7; 4BKC; 4BKD; 4BTZ; 4C94; 4MNS; 4QIP; 4RYV; 4Y31; 4Z3L; 5AMW; 5C9Y; 5MMU; 6R3C; 6ST8; 6ST9; 6STA; 6STB; 7MXL; 7N0U; 7N0V
» more