PROSITE entry PS00461

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General information about the entry

Entry name [info]	6PGD
Accession [info]	PS00461
Entry type [info]	PATTERN
Date [info]	01-MAY-1991 CREATED; 01-DEC-2004 DATA UPDATE; 27-MAR-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC00390

Name and characterization of the entry

Description [info]	6-phosphogluconate dehydrogenase signature.
Pattern [info]	[LIVM]-x-[DG]-x(2)-[GAEHS]-[NQSD]-[KS]-G-[TE]-G-x-W.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_02 which contains 571'282 sequence entries.

Total number of hits	56 in 56 different sequences
Number of true positive hits	56 in 56 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	8
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	87.50 %

Comments [info]

Taxonomic range [info]	Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info]	1
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences

56 sequences

6PGD1_YEAST (P38720), 6PGD2_YEAST (P53319), 6PGD9_ECOLX (P37754),

6PGDH_BACSU (P12013), 6PGD_AGGAC  (P70718), 6PGD_BACLI  (P52207), 
6PGD_BACSU  (P80859), 6PGD_BUCAI  (P57208), 6PGD_BUCAP  (Q9ZHD9), 
6PGD_BUCBP  (Q89AX5), 6PGD_CAEEL  (Q17761), 6PGD_CANAX  (O13287), 
6PGD_CERCA  (P41570), 6PGD_CHLMU  (Q9PKX7), 6PGD_CHLPN  (Q9Z8I3), 
6PGD_CHLTR  (O84066), 6PGD_CITAM  (P41581), 6PGD_CITFR  (P41583), 
6PGD_CITKO  (P41582), 6PGD_CUNEL  (O60037), 6PGD_DICDI  (Q8TA03), 
6PGD_DROME  (P41572), 6PGD_DROSI  (P41573), 6PGD_ECOLI  (P00350), 
6PGD_HAEDU  (Q7VMX4), 6PGD_HAEIN  (P43774), 6PGD_HUMAN  (P52209), 
6PGD_KLEPN  (P41576), 6PGD_LACLA  (Q9CHU6), 6PGD_LACLM  (P96789), 
6PGD_MOUSE  (Q9DCD0), 6PGD_PIG(P14332), 6PGD_PSEVU  (P41574), 
6PGD_RAOPL  (P41575), 6PGD_RAOTE  (P41577), 6PGD_RAT(P85968), 
6PGD_SALTY  (P14062), 6PGD_SCHPO  (P78812), 6PGD_SHEEP  (P00349), 
6PGD_SHIBO  (P41578), 6PGD_SHIDY  (P41579), 6PGD_SHIFL  (P37756), 
6PGD_SHISO  (P41580), 6PGD_STAAC  (Q5HFR2), 6PGD_STAAM  (Q931R3), 
6PGD_STAAN  (P63334), 6PGD_STAAR  (Q6GGI7), 6PGD_STAAS  (Q6G954), 
6PGD_STAAW  (P63335), 6PGD_STAEQ  (Q5HP42), 6PGD_STAES  (Q8CP47), 
6PGD_SYNE7  (P21577), 6PGD_SYNY3  (P52208), 6PGD_TREPA  (O83351), 
6PGD_TRYBB  (P31072), YQEC_BACSU  (P54448)

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Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
[Clustal format, color, condensed view] [Clustal format, color]
[Clustal format, plain text] [Fasta format]
Retrieve the sequence logo from the alignment

UniProtKB/Swiss-Prot
False negative sequences

8 sequences

6PGD1_ARATH (Q9SH69), 6PGD1_ORYSJ (Q9LI00), 6PGD1_SPIOL (Q94KU1),

6PGD2_ARATH (Q9FWA3), 6PGD2_ORYSJ (Q2R480), 6PGD2_SPIOL (Q94KU2), 
6PGD3_ARATH (Q9FFR3), 6PGDH_GLUOX (G5EBD7)

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PDB
[Detailed view]

18 PDB

1PGJ; 1PGN; 1PGO; 1PGP; 1PGQ; 2IYO; 2IYP; 2IZ0; 2IZ1; 2JKV; 2P4Q; 2PGD; 2ZYA; 2ZYD; 3FWN; 4GWG; 4GWK; 5UQ9
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