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Entry: PS00461

General information about the entry

Entry name [info] 6PGD
Accession [info] PS00461
Entry type [info] PATTERN
Date [info] 01-MAY-1991 CREATED;
01-DEC-2004 DATA UPDATE;
13-NOV-2019 INFO UPDATE.
PROSITE Doc. [info] PDOC00390

Name and characterization of the entry

Description [info] 6-phosphogluconate dehydrogenase signature.
Pattern [info] 
[LIVM]-x-[DG]-x(2)-[GAEHS]-[NQSD]-[KS]-G-[TE]-G-x-W.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2019_10 which contains 561'356 sequence entries.


Total number of hits 56 in 56 different sequences
Number of true positive hits 56 in 56 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 8
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 87.50 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 56 sequences 

6PGD1_YEAST (P38720    ), 6PGD2_YEAST (P53319    ), 6PGD9_ECOLX (P37754    ), 

6PGDH_BACSU (P12013    ), 6PGD_AGGAC  (P70718    ), 6PGD_BACLI  (P52207    ), 
6PGD_BACSU  (P80859    ), 6PGD_BUCAI  (P57208    ), 6PGD_BUCAP  (Q9ZHD9    ), 
6PGD_BUCBP  (Q89AX5    ), 6PGD_CAEEL  (Q17761    ), 6PGD_CANAX  (O13287    ), 
6PGD_CERCA  (P41570    ), 6PGD_CHLMU  (Q9PKX7    ), 6PGD_CHLPN  (Q9Z8I3    ), 
6PGD_CHLTR  (O84066    ), 6PGD_CITAM  (P41581    ), 6PGD_CITFR  (P41583    ), 
6PGD_CITKO  (P41582    ), 6PGD_CUNEL  (O60037    ), 6PGD_DICDI  (Q8TA03    ), 
6PGD_DROME  (P41572    ), 6PGD_DROSI  (P41573    ), 6PGD_ECOLI  (P00350    ), 
6PGD_HAEDU  (Q7VMX4    ), 6PGD_HAEIN  (P43774    ), 6PGD_HUMAN  (P52209    ), 
6PGD_KLEPN  (P41576    ), 6PGD_LACLA  (Q9CHU6    ), 6PGD_LACLM  (P96789    ), 
6PGD_MOUSE  (Q9DCD0    ), 6PGD_PIG    (P14332    ), 6PGD_PSEVU  (P41574    ), 
6PGD_RAOPL  (P41575    ), 6PGD_RAOTE  (P41577    ), 6PGD_RAT    (P85968    ), 
6PGD_SALTY  (P14062    ), 6PGD_SCHPO  (P78812    ), 6PGD_SHEEP  (P00349    ), 
6PGD_SHIBO  (P41578    ), 6PGD_SHIDY  (P41579    ), 6PGD_SHIFL  (P37756    ), 
6PGD_SHISO  (P41580    ), 6PGD_STAAC  (Q5HFR2    ), 6PGD_STAAM  (Q931R3    ), 
6PGD_STAAN  (P63334    ), 6PGD_STAAR  (Q6GGI7    ), 6PGD_STAAS  (Q6G954    ), 
6PGD_STAAW  (P63335    ), 6PGD_STAEQ  (Q5HP42    ), 6PGD_STAES  (Q8CP47    ), 
6PGD_SYNE7  (P21577    ), 6PGD_SYNY3  (P52208    ), 6PGD_TREPA  (O83351    ), 
6PGD_TRYBB  (P31072    ), YQEC_BACSU  (P54448    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 8 sequences 

6PGD1_ARATH (Q9SH69    ), 6PGD1_ORYSJ (Q9LI00    ), 6PGD1_SPIOL (Q94KU1    ), 

6PGD2_ARATH (Q9FWA3    ), 6PGD2_ORYSJ (Q2R480    ), 6PGD2_SPIOL (Q94KU2    ), 
6PGD3_ARATH (Q9FFR3    ), 6PGDH_GLUOX (G5EBD7    )
» more

PDB
[Detailed view]		 18 PDB

1PGJ; 1PGN; 1PGO; 1PGP; 1PGQ; 2IYO; 2IYP; 2IZ0; 2IZ1; 2JKV; 2P4Q; 2PGD; 2ZYA; 2ZYD; 3FWN; 4GWG; 4GWK; 5UQ9
» more

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