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PROSITE entry PS00462


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General information about the entry

Entry name [info] G_GLU_TRANSPEPTIDASE
Accession [info] PS00462
Entry type [info] PATTERN
Date [info] 01-MAY-1991 CREATED;
01-NOV-1997 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00404

Name and characterization of the entry

Description [info] Gamma-glutamyltranspeptidase signature.
Pattern [info] 
T-[STA]-H-x-[ST]-[LIVMA]-x(4)-G-[SN]-x-V-[STA]-x-T-x-T-[LIVM]-[NE]-
x(1,2)-[FY]-G.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_04 which contains 571'864 sequence entries.


Total number of hits 20 in 20 different sequences
Number of true positive hits 20 in 20 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 16
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 55.56 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 20 sequences 

ECM38_YEAST (Q05902), GGT1_HUMAN  (P19440), GGT1_MOUSE  (Q60928), 

GGT1_PIG(P20735), GGT1_RAT(P07314), GGT2_HUMAN  (P36268), 
GGT3_HUMAN  (A6NGU5), GGT5_HUMAN  (P36269), GGT5_MOUSE  (Q9Z2A9), 
GGT5_RAT(Q9QWE9), GGTL1_HUMAN (Q9BX51), GGTL2_HUMAN (Q14390), 
GGTL3_HUMAN (B5MD39), GGT_BACNA   (P63186), GGT_BACSU   (P54422), 
GGT_ECOLI   (P18956), GGT_PSEAE   (Q9I406), GGT_PSEUA   (P36267), 
PAC1_PSES3  (P15557), PAC1_PSESV  (Q05053)
» more

UniProtKB/Swiss-Prot
False negative sequences		 16 sequences 

GAGT1_ARATH (Q8VYW6), GAGT2_ARATH (Q680I5), GAGT3_ARATH (Q9M0G0), 

GAGT4_ARATH (Q9CAR5), GGT1_SCHPO  (Q9US04), GGT2_SCHPO  (O14194), 
GGT6_BOVIN  (A7YWM1), GGT6_HUMAN  (Q6P531), GGT6_MOUSE  (Q6PDE7), 
GGT6_RAT(Q6IE08), GGT7_BOVIN  (Q0V8L2), GGT7_HUMAN  (Q9UJ14), 
GGT7_MOUSE  (Q99JP7), GGT7_RAT(Q99MZ4), GGT_SYNY3   (P74181), 
YWRD_BACSU  (O05218)
» more

PDB
[Detailed view]		 22 PDB

2DBU; 2DBW; 2DBX; 2DG5; 2E0X; 2E0Y; 2V36; 2Z8I; 2Z8J; 2Z8K; 3A75; 3WHQ; 3WHR; 3WHS; 4GDX; 4GG2; 4Z9O; 4ZBK; 4ZC6; 4ZCG; 5B5T; 5V4Q
» more