PROSITE entry PS00489
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General information about the entry
| PURL [info] | https://purl.expasy.org/prosite/signature/PS00489 |
| Entry name [info] | RNA_POL_PHAGE_2 |
| Accession [info] | PS00489 |
| Entry type [info] | PATTERN |
| Date [info] |
01-MAY-1991 CREATED;
01-OCT-1993 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00410 |
| Associated ProRule [info] | PRU10032 |
Name and characterization of the entry
| Description [info] | Bacteriophage-type RNA polymerase family active site signature 2. |
| Pattern [info] |
[LIVMF]-x-R-x(3)-K-x(2)-[LIVMF]-M-[PT]-x(2)-Y. |
Numerical results [info]
| Total number of hits | 27 in 27 different sequences |
| Number of true positive hits | 27 in 27 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 0 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 100.00 % |
Comments [info]
| Taxonomic range [info] | Bacteriophages, Eukaryotes |
| Maximum number of repetitions [info] | 1 |
| Site [info] | active_site at position 5 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
27 sequences
RPO1B_TOBAC (Q8L6J5), RPO2A_TOBAC (Q8L6J2), RPO2B_TOBAC (Q8L6J3), RPO3A_TOBAC (P69243), RPO3B_TOBAC (Q8L6J1), RPOL_BPK11 (P18147), RPOL_BPSP6 (P06221), RPOL_BPT3 (P07659), RPOL_BPT7 (P00573), RPOM_HUMAN (O00411), RPOM_MOUSE (Q8BKF1), RPOM_NEUCR (P38671), RPOM_SCHPO (O13993), RPOM_YEAST (P13433), RPOP_AGABT (P33539), RPOP_CLAPU (P22372), RPOP_GELSP (O03685), RPOP_MAIZE (P10581), RPOP_NEUCS (P33540), RPOP_NEUIN (P33541), RPOP_PODAS (Q01521), RPOT1_ARATH (P92969), RPOT1_NICSY (Q93Y94), RPOT2_ARATH (Q9LFV6), RPOT2_NICSY (Q8VWF8), RPOT3_ARATH (O24600), RPOT3_NICSY (P69242)» more
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| PDB [Detailed view] |
41 PDB
1ARO; 1CEZ; 1H38; 1MSW; 1QLN; 1S0V; 1S76; 1S77; 2PI4; 2PI5; 3E2E; 3E3J; 3SPA; 4BOC; 4RNP; 5OLA; 6ERP; 6ERQ; 6YMV; 6YMW; 7A8P; 7PZP; 7PZR; 7ZC4; 8AP1; 8ATT; 8ATV; 8ATW; 8C5S; 8C5U; 8DH0; 8DH1; 8DH2; 8DH3; 8DH4; 8DH5; 8Q63; 8U8U; 8U8V; 9BDC; 9BDD » more |