PROSITE entry PS00508
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General information about the entry
Entry name [info] | NI_HGENASE_L_2 |
Accession [info] | PS00508 |
Entry type [info] | PATTERN |
Date [info] |
01-MAY-1991 CREATED;
01-JAN-2008 DATA UPDATE; 13-SEP-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00400 |
Name and characterization of the entry
Description [info] | Nickel-dependent hydrogenases large subunit signature 2. |
Pattern [info] |
[FY]-D-[PI]-[CU]-[LIMAV]-[ASG]-C-x(2,3)-H. |
Numerical results [info]
Total number of hits | 32 in 32 different sequences |
Number of true positive hits | 32 in 32 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 6 |
Number of 'partial' sequences | 2 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 84.21 % |
Comments [info]
Taxonomic range [info] | Archaea, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Site [info] | nickel at position 4 |
Site [info] | nickel at position 7 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
32 sequences
FRHA_METBF (P80489), FRHA_METJA (Q60338), FRHA_METTH (P19496), FRHA_METVO (Q00390), HOXH_CUPNH (P22320), HYD1A_PYRFU (E7FI44), HYD2A_PYRFU (E7FHC4), MBHL_AFIC5 (O33406), MBHL_ALCHY (P33374), MBHL_AZOCH (P18191), MBHL_AZOVI (P21949), MBHL_BRADU (P12636), MBHL_CITFR (Q46046), MBHL_CUPNH (P31891), MBHL_ECOLI (P0ACD8), MBHL_RHILV (P18636), MBHL_RHOCA (P15284), MBHL_RUBGE (P17632), MBHL_SHIFL (P0ACD9), MBHL_WOLSU (P31883), MBHM_ECO57 (P0ACE1), MBHM_ECOLI (P0ACE0), MBHM_SHIFL (P0ACE2), MVHA_METFE (Q49179), MVHA_METTH (Q50783), MVHA_METTM (P60227), PHNL_DESVM (P21852), PHNL_MEGGA (P12944), PHNL_SOLFR (P18188), PHSL_DESBA (P13065), VHCA_METVO (Q00404), VHUU_METKA (P0C1V6)» more
|
UniProtKB/Swiss-Prot False negative sequences |
6 sequences
VHCA_ARCPA (P84625), VHUA_METJA (Q58592), VHUA_METVO (Q00407), VHUU_METJA (P81335), VHUU_METMP (P0C1V5), VHUU_METVO (Q00410)» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
2 sequences
HOXH_RHOOP (P22661), PHSL_DESNO (P13066) |
PDB [Detailed view] |
80 PDB
1CC1; 1FRF; 1FRV; 1H2A; 1H2R; 1UBH; 1UBJ; 1UBK; 1UBL; 1UBM; 1UBO; 1UBR; 1UBT; 1UBU; 1WUH; 1WUI; 1WUJ; 1WUK; 1WUL; 1YQ9; 1YQW; 1YRQ; 2FRV; 3CUR; 3CUS; 3H3X; 3RGW; 3UQY; 3USC; 3USE; 4GD3; 4IUB; 4IUC; 4IUD; 4TTT; 4U9H; 4U9I; 4UCQ; 4UCW; 4UCX; 4UE2; 4UE3; 4UE6; 4UEW; 4UPE; 4UPV; 4UQL; 4UQP; 4URH; 5A4F; 5A4M; 5D51; 5JRD; 5LMM; 5LRY; 5MDJ; 5MDK; 5MDL; 5XLE; 5XLF; 5XLG; 5XLH; 5Y4N; 6EHQ; 6EHS; 6EN9; 6FPI; 6FPO; 6FPW; 6G7M; 6G7R; 6G94; 6GAL; 6GAM; 6GAN; 6RP2; 6SYO; 7NEM; 7ODG; 7ODH » more |