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PROSITE entry PS00528


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General information about the entry

Entry name [info] RIBOSOMAL_S4E
Accession [info] PS00528
Entry type [info] PATTERN
Date [info] 01-DEC-1991 CREATED;
01-JUL-1999 DATA UPDATE;
08-NOV-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00457

Name and characterization of the entry

Description [info] Ribosomal protein S4e signature.
Pattern [info] 
H-x-K-R-[LIVMF]-[SANK]-x-P-x(2)-[WY]-x-[LIVM]-x-[KRP].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_05 which contains 570'420 sequence entries.


Total number of hits 73 in 73 different sequences
Number of true positive hits 73 in 73 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 30
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 70.87 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 73 sequences 

RS41_ARATH  (Q93VH9), RS42_ARATH  (P49204), RS43_ARATH  (Q8VYK6), 

RS4A_SCHPO  (P87158), RS4A_YEAST  (P0CX35), RS4B_SCHPO  (Q9USW5), 
RS4B_YEAST  (P0CX36), RS4C_SCHPO  (Q9P4W9), RS4E_ARCFU  (O28366), 
RS4E_HALLT  (B9LSR5), RS4E_HALMA  (P22510), RS4E_HALS3  (B0R668), 
RS4E_HALSA  (Q9HPC2), RS4E_IGNH4  (A8ACD4), RS4E_METAC  (Q8TRT5), 
RS4E_METAR  (Q0W1X6), RS4E_METJA  (P54039), RS4E_METKA  (Q8TW18), 
RS4E_METM5  (A4FWA9), RS4E_METM6  (A9A9Q2), RS4E_METM7  (A6VGZ7), 
RS4E_METMA  (Q8PV38), RS4E_METMP  (P62428), RS4E_METST  (Q2NFW9), 
RS4E_METTH  (O26123), RS4E_METVA  (P14023), RS4E_METVS  (A6UQ56), 
RS4E_NATPD  (Q3IMX6), RS4E_PYRAB  (Q9V1U8), RS4E_PYRFU  (Q8U011), 
RS4E_PYRHO  (O59430), RS4E_THEKO  (Q5JJG0), RS4X_CHLAE  (Q76N24), 
RS4X_DANRE  (Q642H9), RS4X_FELCA  (P62705), RS4X_HUMAN  (P62701), 
RS4X_MACFU  (Q76MY1), RS4X_MESAU  (P62704), RS4X_MONDO  (O62738), 
RS4X_MOUSE  (P62702), RS4X_RAT(P62703), RS4Y1_GORGO (Q861U8), 
RS4Y1_HUMAN (P22090), RS4Y1_MACFU (P79183), RS4Y1_MONDO (O62739), 
RS4Y1_PANPA (Q861V0), RS4Y1_PANTR (Q861U9), RS4Y1_PONPY (Q861U7), 
RS4Y2_HUMAN (Q8TD47), RS4Y2_PANTR (Q6GVM7), RS4_BOMMO   (Q5UAP0), 
RS4_BOVIN   (P79103), RS4_CAEEL   (Q9N3X2), RS4_CANAL   (A0A1D8PCI6), 
RS4_CANAX   (P47837), RS4_CARGR   (Q4GXU6), RS4_CHICK   (P47836), 
RS4_CRIGR   (P47961), RS4_DICDI   (P51405), RS4_DROME   (P41042), 
RS4_GOSHI   (P46299), RS4_ICTPU   (Q90YS0), RS4_IXOSC   (Q4PMB3), 
RS4_LYSTE   (Q56FH2), RS4_MAIZE   (O22424), RS4_ORYSJ   (P49398), 
RS4_PRUAR   (O81363), RS4_SOLTU   (P46300), RS4_SPOFR   (Q95V34), 
RS4_TETTH   (P0C233), RS4_XENLA   (P49401), RS4_XENTR   (Q6PBC4), 
RS4_YARLI   (O59950)
» more

UniProtKB/Swiss-Prot
False negative sequences		 30 sequences 

RS4E_AERPE  (Q9YF85), RS4E_CALMQ  (A8MB20), RS4E_DESA1  (B8D5V8), 

RS4E_HYPBU  (A2BMD1), RS4E_KORCO  (B1L778), RS4E_META3  (A6UWV0), 
RS4E_METBF  (Q46GA7), RS4E_METHJ  (Q2FT37), RS4E_METS3  (A5UL76), 
RS4E_METS5  (A4YCX8), RS4E_NANEQ  (P62429), RS4E_PICTO  (Q6L1B5), 
RS4E_PYRAE  (Q8ZTD3), RS4E_PYRAR  (A4WLL4), RS4E_PYRCJ  (A3MWZ7), 
RS4E_PYRIL  (A1RS06), RS4E_PYRNV  (B1Y9S4), RS4E_SACS2  (Q9UX94), 
RS4E_STAMF  (A3DNB9), RS4E_SULAC  (O05634), RS4E_SULIA  (C3N5T9), 
RS4E_SULIK  (C4KHG8), RS4E_SULIL  (C3MQ71), RS4E_SULIM  (C3MVJ0), 
RS4E_SULIN  (C3NH97), RS4E_SULIY  (C3NEF5), RS4E_SULTO  (Q975J2), 
RS4E_THEAC  (Q56230), RS4E_THEVO  (Q97BW4), RS4_BIGNA   (Q40941)
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 1 sequence 

RS4_HORSE   (P55832)


				
	

	

		PDB
[Detailed view]		
		
			249 PDB
			


			3J6X; 3J6Y; 3J77; 3J78; 4BTS; 4U3M; 4U3N; 4U3U; 4U4N; 4U4O; 4U4Q; 4U4R; 
			
				4U4U; 4U4Y; 4U4Z; 4U50; 4U51; 4U52; 4U53; 4U55; 4U56; 4U6F; 4UG0; 4V5O; 
				4V6I; 4V6U; 4V6W; 4V6X; 4V88; 4V8Y; 4V8Z; 4V92; 5A2Q; 5AJ0; 5DAT; 5DC3; 
				5DGE; 5DGF; 5DGV; 5FCI; 5FCJ; 5FLX; 5I4L; 5JB3; 5JBH; 5JPQ; 5JUO; 5JUP; 
				5JUS; 5JUT; 5JUU; 5LKS; 5LL6; 5LYB; 5M1J; 5MC6; 5MEI; 5NDG; 5NDV; 5NDW; 
				5OA3; 5OBM; 5ON6; 5T2C; 5TBW; 5TGA; 5TGM; 5TZS; 5VYC; 5WLC; 5WYJ; 5WYK; 
				6EML; 6FAI; 6FEC; 6G18; 6G4S; 6G4W; 6G51; 6G53; 6G5H; 6G5I; 6GQ1; 6GQB; 
				6GQV; 6HHQ; 6I7O; 6IP5; 6IP6; 6IP8; 6KE6; 6LQP; 6LQQ; 6LQR; 6LQS; 6LQT; 
				6LQU; 6LQV; 6MTD; 6MTE; 6OLE; 6OLF; 6OLG; 6OLI; 6OLZ; 6OM0; 6OM7; 6Q8Y; 
				6QZP; 6RBD; 6RBE; 6S47; 6SKF; 6SKG; 6SNT; 6SV4; 6SW9; 6SWC; 6SWD; 6T4Q; 
				6T7I; 6T7T; 6T83; 6TB3; 6TH6; 6TNU; 6WDR; 6WOO; 6XA1; 6XIQ; 6XIR; 6XU6; 
				6XU7; 6XU8; 6Y0G; 6Y2L; 6Y57; 6Y7C; 6YBW; 6Z6J; 6Z6K; 6Z6L; 6Z6M; 6Z6N; 
				6ZCE; 6ZLW; 6ZM7; 6ZME; 6ZMI; 6ZMO; 6ZMT; 6ZMW; 6ZN5; 6ZOJ; 6ZOK; 6ZON; 
				6ZP4; 6ZQB; 6ZQC; 6ZQD; 6ZQE; 6ZQF; 6ZQG; 6ZU9; 6ZUO; 6ZV6; 6ZVH; 6ZVI; 
				6ZVJ; 6ZXD; 6ZXE; 6ZXF; 6ZXG; 6ZXH; 7A09; 7A1G; 7AJT; 7AJU; 7B7D; 7CPU; 
				7CPV; 7D4I; 7D5T; 7D63; 7K5I; 7LS1; 7LS2; 7MPI; 7MPJ; 7MQ8; 7MQA; 7N8B; 
				7NRC; 7NRD; 7OYA; 7OYB; 7OYC; 7PZY; 7Q08; 7Q0F; 7Q0P; 7Q0R; 7QGG; 7QP6; 
				7QP7; 7QVP; 7R4X; 7TQL; 7WTL; 7WTM; 7WTN; 7WTO; 7WTP; 7WTQ; 7WTR; 7WTS; 
				7WTT; 7WTU; 7WTV; 7WTW; 7WTX; 7WTZ; 7WU0; 7XNX; 7XNY; 7ZAG; 7ZAH; 7ZAI; 
				7ZHG; 7ZJW; 7ZJX; 7ZPQ; 7ZRS; 7ZUW; 7ZUX; 7ZW0; 8BQD; 8BQX; 8C00; 8C01; 
				8C83; 8CAH; 8CAS; 8CBJ; 8G5Y; 8G60; 8G61; 8G6J; 8GLP
			
			

			» more