PROSITE entry PS00528
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General information about the entry
Entry name [info] | RIBOSOMAL_S4E |
Accession [info] | PS00528 |
Entry type [info] | PATTERN |
Date [info] |
01-DEC-1991 CREATED;
01-JUL-1999 DATA UPDATE; 08-NOV-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00457 |
Name and characterization of the entry
Description [info] | Ribosomal protein S4e signature. |
Pattern [info] |
H-x-K-R-[LIVMF]-[SANK]-x-P-x(2)-[WY]-x-[LIVM]-x-[KRP]. |
Numerical results [info]
Total number of hits | 73 in 73 different sequences |
Number of true positive hits | 73 in 73 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 30 |
Number of 'partial' sequences | 1 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 70.87 % |
Comments [info]
Taxonomic range [info] | Archaea, Eukaryotes |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
73 sequences
RS41_ARATH (Q93VH9), RS42_ARATH (P49204), RS43_ARATH (Q8VYK6), RS4A_SCHPO (P87158), RS4A_YEAST (P0CX35), RS4B_SCHPO (Q9USW5), RS4B_YEAST (P0CX36), RS4C_SCHPO (Q9P4W9), RS4E_ARCFU (O28366), RS4E_HALLT (B9LSR5), RS4E_HALMA (P22510), RS4E_HALS3 (B0R668), RS4E_HALSA (Q9HPC2), RS4E_IGNH4 (A8ACD4), RS4E_METAC (Q8TRT5), RS4E_METAR (Q0W1X6), RS4E_METJA (P54039), RS4E_METKA (Q8TW18), RS4E_METM5 (A4FWA9), RS4E_METM6 (A9A9Q2), RS4E_METM7 (A6VGZ7), RS4E_METMA (Q8PV38), RS4E_METMP (P62428), RS4E_METST (Q2NFW9), RS4E_METTH (O26123), RS4E_METVA (P14023), RS4E_METVS (A6UQ56), RS4E_NATPD (Q3IMX6), RS4E_PYRAB (Q9V1U8), RS4E_PYRFU (Q8U011), RS4E_PYRHO (O59430), RS4E_THEKO (Q5JJG0), RS4X_CHLAE (Q76N24), RS4X_DANRE (Q642H9), RS4X_FELCA (P62705), RS4X_HUMAN (P62701), RS4X_MACFU (Q76MY1), RS4X_MESAU (P62704), RS4X_MONDO (O62738), RS4X_MOUSE (P62702), RS4X_RAT(P62703), RS4Y1_GORGO (Q861U8), RS4Y1_HUMAN (P22090), RS4Y1_MACFU (P79183), RS4Y1_MONDO (O62739), RS4Y1_PANPA (Q861V0), RS4Y1_PANTR (Q861U9), RS4Y1_PONPY (Q861U7), RS4Y2_HUMAN (Q8TD47), RS4Y2_PANTR (Q6GVM7), RS4_BOMMO (Q5UAP0), RS4_BOVIN (P79103), RS4_CAEEL (Q9N3X2), RS4_CANAL (A0A1D8PCI6), RS4_CANAX (P47837), RS4_CARGR (Q4GXU6), RS4_CHICK (P47836), RS4_CRIGR (P47961), RS4_DICDI (P51405), RS4_DROME (P41042), RS4_GOSHI (P46299), RS4_ICTPU (Q90YS0), RS4_IXOSC (Q4PMB3), RS4_LYSTE (Q56FH2), RS4_MAIZE (O22424), RS4_ORYSJ (P49398), RS4_PRUAR (O81363), RS4_SOLTU (P46300), RS4_SPOFR (Q95V34), RS4_TETTH (P0C233), RS4_XENLA (P49401), RS4_XENTR (Q6PBC4), RS4_YARLI (O59950)» more
|
UniProtKB/Swiss-Prot False negative sequences |
30 sequences
RS4E_AERPE (Q9YF85), RS4E_CALMQ (A8MB20), RS4E_DESA1 (B8D5V8), RS4E_HYPBU (A2BMD1), RS4E_KORCO (B1L778), RS4E_META3 (A6UWV0), RS4E_METBF (Q46GA7), RS4E_METHJ (Q2FT37), RS4E_METS3 (A5UL76), RS4E_METS5 (A4YCX8), RS4E_NANEQ (P62429), RS4E_PICTO (Q6L1B5), RS4E_PYRAE (Q8ZTD3), RS4E_PYRAR (A4WLL4), RS4E_PYRCJ (A3MWZ7), RS4E_PYRIL (A1RS06), RS4E_PYRNV (B1Y9S4), RS4E_SACS2 (Q9UX94), RS4E_STAMF (A3DNB9), RS4E_SULAC (O05634), RS4E_SULIA (C3N5T9), RS4E_SULIK (C4KHG8), RS4E_SULIL (C3MQ71), RS4E_SULIM (C3MVJ0), RS4E_SULIN (C3NH97), RS4E_SULIY (C3NEF5), RS4E_SULTO (Q975J2), RS4E_THEAC (Q56230), RS4E_THEVO (Q97BW4), RS4_BIGNA (Q40941)» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
RS4_HORSE (P55832) |
PDB [Detailed view] |
249 PDB
3J6X; 3J6Y; 3J77; 3J78; 4BTS; 4U3M; 4U3N; 4U3U; 4U4N; 4U4O; 4U4Q; 4U4R; 4U4U; 4U4Y; 4U4Z; 4U50; 4U51; 4U52; 4U53; 4U55; 4U56; 4U6F; 4UG0; 4V5O; 4V6I; 4V6U; 4V6W; 4V6X; 4V88; 4V8Y; 4V8Z; 4V92; 5A2Q; 5AJ0; 5DAT; 5DC3; 5DGE; 5DGF; 5DGV; 5FCI; 5FCJ; 5FLX; 5I4L; 5JB3; 5JBH; 5JPQ; 5JUO; 5JUP; 5JUS; 5JUT; 5JUU; 5LKS; 5LL6; 5LYB; 5M1J; 5MC6; 5MEI; 5NDG; 5NDV; 5NDW; 5OA3; 5OBM; 5ON6; 5T2C; 5TBW; 5TGA; 5TGM; 5TZS; 5VYC; 5WLC; 5WYJ; 5WYK; 6EML; 6FAI; 6FEC; 6G18; 6G4S; 6G4W; 6G51; 6G53; 6G5H; 6G5I; 6GQ1; 6GQB; 6GQV; 6HHQ; 6I7O; 6IP5; 6IP6; 6IP8; 6KE6; 6LQP; 6LQQ; 6LQR; 6LQS; 6LQT; 6LQU; 6LQV; 6MTD; 6MTE; 6OLE; 6OLF; 6OLG; 6OLI; 6OLZ; 6OM0; 6OM7; 6Q8Y; 6QZP; 6RBD; 6RBE; 6S47; 6SKF; 6SKG; 6SNT; 6SV4; 6SW9; 6SWC; 6SWD; 6T4Q; 6T7I; 6T7T; 6T83; 6TB3; 6TH6; 6TNU; 6WDR; 6WOO; 6XA1; 6XIQ; 6XIR; 6XU6; 6XU7; 6XU8; 6Y0G; 6Y2L; 6Y57; 6Y7C; 6YBW; 6Z6J; 6Z6K; 6Z6L; 6Z6M; 6Z6N; 6ZCE; 6ZLW; 6ZM7; 6ZME; 6ZMI; 6ZMO; 6ZMT; 6ZMW; 6ZN5; 6ZOJ; 6ZOK; 6ZON; 6ZP4; 6ZQB; 6ZQC; 6ZQD; 6ZQE; 6ZQF; 6ZQG; 6ZU9; 6ZUO; 6ZV6; 6ZVH; 6ZVI; 6ZVJ; 6ZXD; 6ZXE; 6ZXF; 6ZXG; 6ZXH; 7A09; 7A1G; 7AJT; 7AJU; 7B7D; 7CPU; 7CPV; 7D4I; 7D5T; 7D63; 7K5I; 7LS1; 7LS2; 7MPI; 7MPJ; 7MQ8; 7MQA; 7N8B; 7NRC; 7NRD; 7OYA; 7OYB; 7OYC; 7PZY; 7Q08; 7Q0F; 7Q0P; 7Q0R; 7QGG; 7QP6; 7QP7; 7QVP; 7R4X; 7TQL; 7WTL; 7WTM; 7WTN; 7WTO; 7WTP; 7WTQ; 7WTR; 7WTS; 7WTT; 7WTU; 7WTV; 7WTW; 7WTX; 7WTZ; 7WU0; 7XNX; 7XNY; 7ZAG; 7ZAH; 7ZAI; 7ZHG; 7ZJW; 7ZJX; 7ZPQ; 7ZRS; 7ZUW; 7ZUX; 7ZW0; 8BQD; 8BQX; 8C00; 8C01; 8C83; 8CAH; 8CAS; 8CBJ; 8G5Y; 8G60; 8G61; 8G6J; 8GLP » more |