PROSITE entry PS00558

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PURL: https://purl.expasy.org/prosite/signature/PS00558

Direct ScanProsite submission

General information about the entry

Entry name [info]	EUKARYOTIC_PORIN
Accession [info]	PS00558
Entry type [info]	PATTERN
Date [info]	01-DEC-1991 CREATED; 01-JUL-1999 DATA UPDATE; 29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC00483

Name and characterization of the entry

Description [info]	Eukaryotic mitochondrial porin signature.
Pattern [info]	[YH]-x(2)-D-[SPCAD]-x-[STA]-x(3)-[TAG]-[KR]-[LIVMF]-[DNSTA]-[DNS]-x(4)- [GSTAN]-[LIVMA]-x-[LIVMY].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.

Total number of hits	38 in 38 different sequences
Number of true positive hits	38 in 38 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	8
Number of 'partial' sequences	1

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	82.61 %

Comments [info]

Taxonomic range [info]	Eukaryotes
Maximum number of repetitions [info]	1
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot True positive sequences	38 sequences VDAC1_ARATH (Q9SRH5), VDAC1_BOVIN (P45879), VDAC1_HUMAN (P21796), VDAC1_MOUSE (Q60932), VDAC1_ORYSJ (Q6K548), VDAC1_PIG (Q9MZ16), VDAC1_RABIT (Q9TT15), VDAC1_RAT (Q9Z2L0), VDAC1_SHEEP (A0A6P7EFR0), VDAC1_SOLTU (P42055), VDAC1_WHEAT (P46274), VDAC1_YEAST (P04840), VDAC2_BOVIN (P68002), VDAC2_HUMAN (P45880), VDAC2_MELGA (P82013), VDAC2_MESAU (P86223), VDAC2_MOUSE (Q60930), VDAC2_PIG (Q9MZ15), VDAC2_RABIT (P68003), VDAC2_RAT (P81155), VDAC2_SOLTU (P42056), VDAC2_XENLA (P81004), VDAC2_YEAST (P40478), VDAC3_ARATH (Q9SMX3), VDAC3_BOVIN (Q9MZ13), VDAC3_HUMAN (Q9Y277), VDAC3_MOUSE (Q60931), VDAC3_ORYSJ (Q7F4F8), VDAC3_PIG (Q29380), VDAC3_PONAB (Q5R7V4), VDAC3_RABIT (Q9TT13), VDAC3_RAT (Q9R1Z0), VDAC5_ORYSJ (Q84P97), VDAC_DICDI (Q01501), VDAC_DROME (Q94920), VDAC_MAIZE (P42057), VDAC_NEUCR (P07144), VDAC_PEA(P42054) » more Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format] Retrieve the sequence logo from the alignment
UniProtKB/Swiss-Prot False negative sequences	8 sequences VDAC2_ARATH (Q9FJX3), VDAC2_ORYSJ (Q6L5I5), VDAC4_ARATH (Q9FKM2), VDAC4_ORYSJ (Q0JJV1), VDAC5_ARATH (Q9M2W6), VDAC6_ORYSJ (Q10S27), VDAC_CAEEL (Q21752), VDAC_SCHPO (Q9P544) » more
UniProtKB/Swiss-Prot 'Partial' sequences	1 sequence VDAC_DORPE (P82945)
PDB [Detailed view]	20 PDB 2JK4; 2K4T; 3EMN; 4C69; 5JDP; 5XDN; 5XDO; 6G6U; 6G73; 6TIQ; 6TIR; 7KUH; 7NIE; 7QI2; 7TCV; 8J0O; 9EIH; 9EII; 9EIJ; 9GNG » more