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PROSITE entry PS00558


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General information about the entry

Entry name [info] EUKARYOTIC_PORIN
Accession [info] PS00558
Entry type [info] PATTERN
Date [info] 01-DEC-1991 CREATED;
01-JUL-1999 DATA UPDATE;
08-NOV-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00483

Name and characterization of the entry

Description [info] Eukaryotic mitochondrial porin signature.
Pattern [info] 
[YH]-x(2)-D-[SPCAD]-x-[STA]-x(3)-[TAG]-[KR]-[LIVMF]-[DNSTA]-[DNS]-x(4)-
[GSTAN]-[LIVMA]-x-[LIVMY].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_05 which contains 570'420 sequence entries.


Total number of hits 37 in 37 different sequences
Number of true positive hits 37 in 37 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 8
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 82.22 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 37 sequences 

VDAC1_ARATH (Q9SRH5), VDAC1_BOVIN (P45879), VDAC1_HUMAN (P21796), 

VDAC1_MOUSE (Q60932), VDAC1_ORYSJ (Q6K548), VDAC1_PIG   (Q9MZ16), 
VDAC1_RABIT (Q9TT15), VDAC1_RAT   (Q9Z2L0), VDAC1_SOLTU (P42055), 
VDAC1_WHEAT (P46274), VDAC1_YEAST (P04840), VDAC2_BOVIN (P68002), 
VDAC2_HUMAN (P45880), VDAC2_MELGA (P82013), VDAC2_MESAU (P86223), 
VDAC2_MOUSE (Q60930), VDAC2_PIG   (Q9MZ15), VDAC2_RABIT (P68003), 
VDAC2_RAT   (P81155), VDAC2_SOLTU (P42056), VDAC2_XENLA (P81004), 
VDAC2_YEAST (P40478), VDAC3_ARATH (Q9SMX3), VDAC3_BOVIN (Q9MZ13), 
VDAC3_HUMAN (Q9Y277), VDAC3_MOUSE (Q60931), VDAC3_ORYSJ (Q7F4F8), 
VDAC3_PIG   (Q29380), VDAC3_PONAB (Q5R7V4), VDAC3_RABIT (Q9TT13), 
VDAC3_RAT   (Q9R1Z0), VDAC5_ORYSJ (Q84P97), VDAC_DICDI  (Q01501), 
VDAC_DROME  (Q94920), VDAC_MAIZE  (P42057), VDAC_NEUCR  (P07144), 
VDAC_PEA(P42054)
» more

UniProtKB/Swiss-Prot
False negative sequences		 8 sequences 

VDAC2_ARATH (Q9FJX3), VDAC2_ORYSJ (Q6L5I5), VDAC4_ARATH (Q9FKM2), 

VDAC4_ORYSJ (Q0JJV1), VDAC5_ARATH (Q9M2W6), VDAC6_ORYSJ (Q10S27), 
VDAC_CAEEL  (Q21752), VDAC_SCHPO  (Q9P544)
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 1 sequence 

VDAC_DORPE  (P82945)


				
	

	

		PDB
[Detailed view]		
		
			14 PDB
			


			2JK4; 2K4T; 3EMN; 4C69; 5JDP; 5XDN; 5XDO; 6G6U; 6G73; 6TIQ; 6TIR; 7KUH; 
			
				7QI2; 7TCV
			
			

			» more