PROSITE entry PS00558
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General information about the entry
Entry name [info] | EUKARYOTIC_PORIN |
Accession [info] | PS00558 |
Entry type [info] | PATTERN |
Date [info] |
01-DEC-1991 CREATED;
01-JUL-1999 DATA UPDATE; 08-NOV-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00483 |
Name and characterization of the entry
Description [info] | Eukaryotic mitochondrial porin signature. |
Pattern [info] |
[YH]-x(2)-D-[SPCAD]-x-[STA]-x(3)-[TAG]-[KR]-[LIVMF]-[DNSTA]-[DNS]-x(4)- [GSTAN]-[LIVMA]-x-[LIVMY]. |
Numerical results [info]
Total number of hits | 37 in 37 different sequences |
Number of true positive hits | 37 in 37 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 8 |
Number of 'partial' sequences | 1 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 82.22 % |
Comments [info]
Taxonomic range [info] | Eukaryotes |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
37 sequences
VDAC1_ARATH (Q9SRH5), VDAC1_BOVIN (P45879), VDAC1_HUMAN (P21796), VDAC1_MOUSE (Q60932), VDAC1_ORYSJ (Q6K548), VDAC1_PIG (Q9MZ16), VDAC1_RABIT (Q9TT15), VDAC1_RAT (Q9Z2L0), VDAC1_SOLTU (P42055), VDAC1_WHEAT (P46274), VDAC1_YEAST (P04840), VDAC2_BOVIN (P68002), VDAC2_HUMAN (P45880), VDAC2_MELGA (P82013), VDAC2_MESAU (P86223), VDAC2_MOUSE (Q60930), VDAC2_PIG (Q9MZ15), VDAC2_RABIT (P68003), VDAC2_RAT (P81155), VDAC2_SOLTU (P42056), VDAC2_XENLA (P81004), VDAC2_YEAST (P40478), VDAC3_ARATH (Q9SMX3), VDAC3_BOVIN (Q9MZ13), VDAC3_HUMAN (Q9Y277), VDAC3_MOUSE (Q60931), VDAC3_ORYSJ (Q7F4F8), VDAC3_PIG (Q29380), VDAC3_PONAB (Q5R7V4), VDAC3_RABIT (Q9TT13), VDAC3_RAT (Q9R1Z0), VDAC5_ORYSJ (Q84P97), VDAC_DICDI (Q01501), VDAC_DROME (Q94920), VDAC_MAIZE (P42057), VDAC_NEUCR (P07144), VDAC_PEA(P42054)» more
|
UniProtKB/Swiss-Prot False negative sequences |
8 sequences
VDAC2_ARATH (Q9FJX3), VDAC2_ORYSJ (Q6L5I5), VDAC4_ARATH (Q9FKM2), VDAC4_ORYSJ (Q0JJV1), VDAC5_ARATH (Q9M2W6), VDAC6_ORYSJ (Q10S27), VDAC_CAEEL (Q21752), VDAC_SCHPO (Q9P544)» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
VDAC_DORPE (P82945) |
PDB [Detailed view] |
14 PDB
2JK4; 2K4T; 3EMN; 4C69; 5JDP; 5XDN; 5XDO; 6G6U; 6G73; 6TIQ; 6TIR; 7KUH; 7QI2; 7TCV » more |