PROSITE entry PS00578
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General information about the entry
| PURL [info] | https://purl.expasy.org/prosite/signature/PS00578 |
| Entry name [info] | RIBOSOMAL_S6E |
| Accession [info] | PS00578 |
| Entry type [info] | PATTERN |
| Date [info] |
01-DEC-1991 CREATED;
01-DEC-2004 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00500 |
Name and characterization of the entry
| Description [info] | Ribosomal protein S6e signature. |
| Pattern [info] |
[LIVM]-[STAMR]-G-G-x-[DG]-x(2)-G-x-[PV]-M. |
Numerical results [info]
| Total number of hits | 80 in 80 different sequences |
| Number of true positive hits | 77 in 77 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 3 in 3 different sequences |
| Number of false negative sequences | 17 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 96.25 % |
| Recall (true positives / (true positives + false negatives)) | 81.91 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
77 sequences
RS62_ARATH (P51430), RS6A_CANAL (A0A1D8PL99), RS6A_SCHPO (P05752), RS6A_YEAST (P0CX37), RS6B_SCHPO (Q9C0Z7), RS6B_YEAST (P0CX38), RS6E_AERPE (Q9Y9B6), RS6E_ARCFU (O29739), RS6E_CALMQ (A8MA52), RS6E_HALLT (B9LR51), RS6E_HALMA (P21509), RS6E_HALS3 (B0R815), RS6E_HALSA (Q9HMJ5), RS6E_HALWD (Q18DP5), RS6E_HYPBU (A2BJZ7), RS6E_METAC (Q8TQL4), RS6E_METAR (Q0W8B4), RS6E_METBF (Q466D6), RS6E_METBU (Q12Z92), RS6E_METJA (P54067), RS6E_METKA (Q8TVE6), RS6E_METMA (Q8PU79), RS6E_METS5 (A4YIY0), RS6E_METST (Q2NGM7), RS6E_METTH (O26360), RS6E_NANEQ (Q74MJ5), RS6E_NATPD (Q3ISW0), RS6E_NITMS (A9A110), RS6E_PYRAB (Q9UYS3), RS6E_PYRAE (Q8ZX25), RS6E_PYRAR (A4WIK0), RS6E_PYRCJ (A3MUD0), RS6E_PYRFU (Q8U3H8), RS6E_PYRHO (O58349), RS6E_PYRIL (A1RUW1), RS6E_PYRNV (B1YCP4), RS6E_SACS2 (Q980A6), RS6E_STAMF (A3DMS1), RS6E_SULIA (C3MZ52), RS6E_SULIK (C4KID0), RS6E_SULIL (C3MR04), RS6E_SULIM (C3MWZ2), RS6E_SULIY (C3N772), RS6E_SULTO (Q975N7), RS6E_THEKO (Q5JDK8), RS6E_THEON (B6YW70), RS6E_THESM (C6A2D7), RS6_AEDAE (Q9U761), RS6_AEDAL (Q9U762), RS6_APLCA (Q9BMX5), RS6_ASPOF (Q9M3V8), RS6_BOVIN (Q5E995), RS6_BRAFL (O01727), RS6_CANGA (Q6FJH3), RS6_CHICK (P47838), RS6_DEBHA (Q6BXH8), RS6_DICDI (Q54UU3), RS6_DROME (P29327), RS6_ENCCU (Q8SRY0), RS6_EREGS (Q74ZK3), RS6_GLOMM (Q2PQM1), RS6_HUMAN (P62753), RS6_ICTPU (Q90YR8), RS6_KLULA (Q6CM04), RS6_KLUMA (P41798), RS6_LEIIN (O44012), RS6_LEIMA (Q9NE83), RS6_MACFA (Q4R4K6), RS6_MANSE (Q94624), RS6_MOUSE (P62754), RS6_ONCMY (Q9YGF2), RS6_RABIT (G1TM55), RS6_RAT (P62755), RS6_SPOFR (Q95V32), RS6_TOBAC (P29345), RS6_XENLA (P39017), RS6_YARLI (Q6C169)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
17 sequences
RS61_ARATH (O48549), RS6E_METB6 (A7IAP8), RS6E_METHJ (Q2FU50), RS6E_METLZ (A2STM7), RS6E_METM5 (A4FWX0), RS6E_METM6 (A9AAA5), RS6E_METM7 (A6VGE7), RS6E_METMJ (A3CSP5), RS6E_METMP (Q6LXY7), RS6E_METPE (B8GJR6), RS6E_METS3 (A5UJM8), RS6E_PICTO (Q6L1H6), RS6E_SULAC (Q4JAI1), RS6E_THEAC (Q9HLA6), RS6E_THEGJ (C5A7C4), RS6E_THEVO (Q978W7), RS6_CAEEL (Q9NEN6)» more |
| UniProtKB/Swiss-Prot False positive sequences |
3 sequences
BCL9L_HUMAN (Q86UU0), BCL9L_MOUSE (Q67FY2), Y886_HAEIN (P44069) |
| PDB [Detailed view] |
422 PDB
3J16; 3J6X; 3J6Y; 3J77; 3J78; 3J80; 3J81; 3JAG; 3JAH; 3JAI; 3JAM; 3JAP; 4D5L; 4D61; 4KZX; 4KZY; 4KZZ; 4U3M; 4U3N; 4U3U; 4U4N; 4U4O; 4U4Q; 4U4R; 4U4U; 4U4Y; 4U4Z; 4U50; 4U51; 4U52; 4U53; 4U55; 4U56; 4U6F; 4UG0; 4V4N; 4V6U; 4V6W; 4V6X; 4V88; 4V8Y; 4V8Z; 4V92; 5A2Q; 5AJ0; 5DAT; 5DC3; 5DGE; 5DGF; 5DGV; 5FCI; 5FCJ; 5FLX; 5I4L; 5IT7; 5IT9; 5JB3; 5JBH; 5JUO; 5JUP; 5JUS; 5JUT; 5JUU; 5K0Y; 5LKS; 5LL6; 5LYB; 5LZS; 5LZT; 5LZU; 5LZV; 5LZW; 5LZX; 5LZY; 5LZZ; 5M1J; 5MC6; 5MEI; 5NDG; 5NDV; 5NDW; 5OA3; 5OBM; 5ON6; 5OSG; 5T2C; 5TBW; 5TGA; 5TGM; 5TZS; 5VYC; 5WLC; 5WYJ; 6AZ1; 6D90; 6D9J; 6EML; 6FAI; 6FEC; 6FYX; 6FYY; 6G18; 6G4S; 6G4W; 6G51; 6G53; 6G5H; 6G5I; 6GQ1; 6GQB; 6GQV; 6GSM; 6GSN; 6GZ3; 6HCF; 6HCJ; 6HCM; 6HCQ; 6HHQ; 6I7O; 6IP5; 6IP6; 6IP8; 6KE6; 6LQP; 6LQQ; 6LQR; 6LQS; 6LQT; 6LQU; 6LQV; 6MTB; 6MTC; 6MTD; 6MTE; 6OLE; 6OLF; 6OLG; 6OLI; 6OLZ; 6OM0; 6OM7; 6P4G; 6P4H; 6P5I; 6P5J; 6P5K; 6P5N; 6Q8Y; 6QZP; 6R5Q; 6R6G; 6R6P; 6R7Q; 6RBD; 6RBE; 6S47; 6SGC; 6SKF; 6SKG; 6SNT; 6SV4; 6SW9; 6SWC; 6SWD; 6T4Q; 6T7I; 6T7T; 6T83; 6TB3; 6TH6; 6TNU; 6UZ7; 6W2S; 6W2T; 6WDR; 6WOO; 6XA1; 6XIQ; 6XIR; 6XU6; 6XU7; 6XU8; 6Y0G; 6Y2L; 6Y57; 6Y7C; 6YAM; 6YBW; 6Z6J; 6Z6K; 6Z6L; 6Z6M; 6Z6N; 6ZCE; 6ZLW; 6ZM7; 6ZME; 6ZMI; 6ZMO; 6ZMT; 6ZMW; 6ZN5; 6ZOJ; 6ZOK; 6ZON; 6ZP4; 6ZQB; 6ZQC; 6ZQD; 6ZQE; 6ZQF; 6ZQG; 6ZU9; 6ZUO; 6ZV6; 6ZVH; 6ZVI; 6ZVJ; 6ZVK; 6ZXD; 6ZXE; 6ZXF; 6ZXG; 6ZXH; 7A01; 7A09; 7A1G; 7AJT; 7AJU; 7B7D; 7CPU; 7CPV; 7D4I; 7D5T; 7D63; 7K5I; 7LS1; 7LS2; 7MDZ; 7MPI; 7MPJ; 7MQ8; 7MQ9; 7MQA; 7N8B; 7NRC; 7NRD; 7O7Y; 7O7Z; 7O80; 7O81; 7OYD; 7PZY; 7Q08; 7Q0F; 7Q0P; 7Q0R; 7QEP; 7QGG; 7QP6; 7QP7; 7QVP; 7R4X; 7SUK; 7TOQ; 7TOR; 7TQL; 7UCJ; 7UCK; 7WTL; 7WTM; 7WTN; 7WTO; 7WTP; 7WTQ; 7WTR; 7WTS; 7WTT; 7WTU; 7WTV; 7WTW; 7WTX; 7WTZ; 7WU0; 7XNX; 7XNY; 7ZAG; 7ZAH; 7ZAI; 7ZHG; 7ZJW; 7ZJX; 7ZPQ; 7ZRS; 7ZUW; 7ZUX; 7ZW0; 8A3W; 8A98; 8BHF; 8BN3; 8BQD; 8BQX; 8BTK; 8C00; 8C01; 8C83; 8CAH; 8CAS; 8CBJ; 8CCS; 8CDL; 8CDR; 8CEH; 8CF5; 8CG8; 8CGN; 8CIV; 8CKU; 8CMJ; 8EUB; 8EVP; 8EVQ; 8EVR; 8EVS; 8EVT; 8EWB; 8EWC; 8G5Y; 8G5Z; 8G60; 8G61; 8G6J; 8GLP; 8I7J; 8IFD; 8IFE; 8JDJ; 8JDK; 8JDL; 8JDM; 8K2C; 8K2D; 8K82; 8OVJ; 8OZ0; 8P2K; 8P4V; 8P9A; 8PJ1; 8PJ2; 8PJ3; 8PJ4; 8PJ5; 8PJ6; 8PPK; 8PPL; 8Q7Z; 8Q87; 8QOI; 8RW1; 8RXH; 8RXX; 8S8D; 8S8E; 8S8F; 8S8G; 8S8H; 8S8I; 8S8J; 8S8K; 8SCB; 8T2X; 8T2Y; 8T2Z; 8T30; 8T3A; 8T3B; 8T3C; 8T3D; 8T3E; 8T3F; 8T4S; 8UKB; 8UT0; 8UTI; 8VFT; 8XP2; 8XP3; 8XSX; 8XSY; 8XSZ; 8XU8; 8XXL; 8XXM; 8XXN; 8Y0U; 8Y0W; 8Y0X; 8YLD; 8YLR; 8YOO; 8YOP; 8Z70; 8Z71; 9AXT; 9AXV; 9BDL; 9BDN; 9BDP; 9BKD; 9BLN; 9C3H; 9E71; 9E7F; 9F1B; 9F1C; 9F1D; 9F9S; 9G8M; 9G8O » more |