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Entry: PS00578 |
Entry name [info] | RIBOSOMAL_S6E |
Accession [info] | PS00578 |
Entry type [info] | PATTERN |
Date [info] |
01-DEC-1991 CREATED;
01-DEC-2004 DATA UPDATE; 10-FEB-2021 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00500 |
Description [info] | Ribosomal protein S6e signature. |
Pattern [info] |
[LIVM]-[STAMR]-G-G-x-[DG]-x(2)-G-x-[PV]-M. |
Total number of hits | 78 in 78 different sequences |
Number of true positive hits | 75 in 75 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 3 in 3 different sequences |
Number of false negative sequences | 17 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 96.15 % |
Recall (true positives / (true positives + false negatives)) | 81.52 % |
Taxonomic range [info] | Archaea, Eukaryotes |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
UniProtKB/Swiss-Prot True positive sequences |
75 sequences
RS62_ARATH (P51430 ), RS6A_SCHPO (P05752 ), RS6A_YEAST (P0CX37 ), RS6B_SCHPO (Q9C0Z7 ), RS6B_YEAST (P0CX38 ), RS6E_AERPE (Q9Y9B6 ), RS6E_ARCFU (O29739 ), RS6E_CALMQ (A8MA52 ), RS6E_HALLT (B9LR51 ), RS6E_HALMA (P21509 ), RS6E_HALS3 (B0R815 ), RS6E_HALSA (Q9HMJ5 ), RS6E_HALWD (Q18DP5 ), RS6E_HYPBU (A2BJZ7 ), RS6E_METAC (Q8TQL4 ), RS6E_METAR (Q0W8B4 ), RS6E_METBF (Q466D6 ), RS6E_METBU (Q12Z92 ), RS6E_METJA (P54067 ), RS6E_METKA (Q8TVE6 ), RS6E_METMA (Q8PU79 ), RS6E_METS5 (A4YIY0 ), RS6E_METST (Q2NGM7 ), RS6E_METTH (O26360 ), RS6E_NANEQ (Q74MJ5 ), RS6E_NATPD (Q3ISW0 ), RS6E_NITMS (A9A110 ), RS6E_PYRAB (Q9UYS3 ), RS6E_PYRAE (Q8ZX25 ), RS6E_PYRAR (A4WIK0 ), RS6E_PYRCJ (A3MUD0 ), RS6E_PYRFU (Q8U3H8 ), RS6E_PYRHO (O58349 ), RS6E_PYRIL (A1RUW1 ), RS6E_PYRNV (B1YCP4 ), RS6E_SACS2 (Q980A6 ), RS6E_STAMF (A3DMS1 ), RS6E_SULIA (C3MZ52 ), RS6E_SULIK (C4KID0 ), RS6E_SULIL (C3MR04 ), RS6E_SULIM (C3MWZ2 ), RS6E_SULIY (C3N772 ), RS6E_SULTO (Q975N7 ), RS6E_THEKO (Q5JDK8 ), RS6E_THEON (B6YW70 ), RS6E_THESM (C6A2D7 ), RS6_AEDAE (Q9U761 ), RS6_AEDAL (Q9U762 ), RS6_APLCA (Q9BMX5 ), RS6_ASHGO (Q74ZK3 ), RS6_ASPOF (Q9M3V8 ), RS6_BOVIN (Q5E995 ), RS6_BRAFL (O01727 ), RS6_CANGA (Q6FJH3 ), RS6_CHICK (P47838 ), RS6_DEBHA (Q6BXH8 ), RS6_DICDI (Q54UU3 ), RS6_DROME (P29327 ), RS6_ENCCU (Q8SRY0 ), RS6_GLOMM (Q2PQM1 ), RS6_HUMAN (P62753 ), RS6_ICTPU (Q90YR8 ), RS6_KLULA (Q6CM04 ), RS6_KLUMA (P41798 ), RS6_LEIIN (O44012 ), RS6_LEIMA (Q9NE83 ), RS6_MACFA (Q4R4K6 ), RS6_MANSE (Q94624 ), RS6_MOUSE (P62754 ), RS6_ONCMY (Q9YGF2 ), RS6_RAT (P62755 ), RS6_SPOFR (Q95V32 ), RS6_TOBAC (P29345 ), RS6_XENLA (P39017 ), RS6_YARLI (Q6C169 )» more
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UniProtKB/Swiss-Prot False negative sequences |
17 sequences
RS61_ARATH (O48549 ), RS6E_METB6 (A7IAP8 ), RS6E_METHJ (Q2FU50 ), RS6E_METLZ (A2STM7 ), RS6E_METM5 (A4FWX0 ), RS6E_METM6 (A9AAA5 ), RS6E_METM7 (A6VGE7 ), RS6E_METMJ (A3CSP5 ), RS6E_METMP (Q6LXY7 ), RS6E_METPE (B8GJR6 ), RS6E_METS3 (A5UJM8 ), RS6E_PICTO (Q6L1H6 ), RS6E_SULAC (Q4JAI1 ), RS6E_THEAC (Q9HLA6 ), RS6E_THEGJ (C5A7C4 ), RS6E_THEVO (Q978W7 ), RS6_CAEEL (Q9NEN6 )» more |
UniProtKB/Swiss-Prot False positive sequences |
3 sequences
BCL9L_HUMAN (Q86UU0 ), BCL9L_MOUSE (Q67FY2 ), Y886_HAEIN (P44069 ) |
PDB [Detailed view] |
177 PDB
3J16; 3J6X; 3J6Y; 3J77; 3J78; 3J80; 3J81; 3JAM; 3JAP; 3JAQ; 4U3M; 4U3N; 4U3U; 4U4N; 4U4O; 4U4Q; 4U4R; 4U4U; 4U4Y; 4U4Z; 4U50; 4U51; 4U52; 4U53; 4U55; 4U56; 4U6F; 4UG0; 4V4N; 4V6U; 4V6W; 4V6X; 4V88; 4V8Y; 4V8Z; 4V92; 5A2Q; 5AJ0; 5DAT; 5DC3; 5DGE; 5DGF; 5DGV; 5FCI; 5FCJ; 5FLX; 5I4L; 5IT7; 5IT9; 5JB3; 5JBH; 5JUO; 5JUP; 5JUS; 5JUT; 5JUU; 5LKS; 5LL6; 5LYB; 5M1J; 5MC6; 5MEI; 5NDG; 5NDV; 5NDW; 5OA3; 5OBM; 5ON6; 5OSG; 5T2C; 5TBW; 5TGA; 5TGM; 5TZS; 5VYC; 5WLC; 5WYJ; 6AZ1; 6EK0; 6EML; 6FAI; 6FEC; 6FYX; 6FYY; 6G18; 6G4S; 6G4W; 6G51; 6G53; 6G5H; 6G5I; 6GQ1; 6GQB; 6GQV; 6GSM; 6GSN; 6HHQ; 6I7O; 6IP5; 6IP6; 6IP8; 6KE6; 6LQP; 6LQQ; 6LQR; 6LQS; 6LQT; 6LQU; 6LQV; 6OLE; 6OLF; 6OLG; 6OLI; 6OLZ; 6OM0; 6OM7; 6Q8Y; 6QZP; 6RBD; 6RBE; 6S47; 6SKF; 6SKG; 6SNT; 6SV4; 6SW9; 6SWC; 6SWD; 6T4Q; 6T7I; 6T7T; 6T83; 6TB3; 6TH6; 6TNU; 6UZ7; 6WDR; 6WOO; 6XA1; 6XIQ; 6XIR; 6Y0G; 6Y2L; 6Y57; 6Y7C; 6YBW; 6Z6J; 6Z6K; 6Z6L; 6Z6M; 6Z6N; 6ZCE; 6ZLW; 6ZM7; 6ZME; 6ZMI; 6ZMO; 6ZMT; 6ZMW; 6ZN5; 6ZOJ; 6ZOK; 6ZON; 6ZP4; 6ZQB; 6ZQC; 6ZQD; 6ZQE; 6ZQF; 6ZQG; 6ZU9; 6ZVH; 6ZVI; 6ZVJ; 7A09; 7A1G; 7K5I » more |