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PROSITE entry PS00578


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PURL: https://purl.expasy.org/prosite/signature/PS00578

Direct ScanProsite submission
General information about the entry

Entry name [info] RIBOSOMAL_S6E
Accession [info] PS00578
Entry type [info] PATTERN
Date [info] 01-DEC-1991 CREATED;
01-DEC-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00500

Name and characterization of the entry

Description [info] Ribosomal protein S6e signature.
Pattern [info] 
[LIVM]-[STAMR]-G-G-x-[DG]-x(2)-G-x-[PV]-M.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 80 in 80 different sequences
Number of true positive hits 77 in 77 different sequences
Number of 'unknown' hits 0
Number of false positive hits 3 in 3 different sequences
Number of false negative sequences 17
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 96.25 %
Recall (true positives / (true positives + false negatives)) 81.91 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 77 sequences 

RS62_ARATH  (P51430), RS6A_CANAL  (A0A1D8PL99), RS6A_SCHPO  (P05752), 

RS6A_YEAST  (P0CX37), RS6B_SCHPO  (Q9C0Z7), RS6B_YEAST  (P0CX38), 
RS6E_AERPE  (Q9Y9B6), RS6E_ARCFU  (O29739), RS6E_CALMQ  (A8MA52), 
RS6E_HALLT  (B9LR51), RS6E_HALMA  (P21509), RS6E_HALS3  (B0R815), 
RS6E_HALSA  (Q9HMJ5), RS6E_HALWD  (Q18DP5), RS6E_HYPBU  (A2BJZ7), 
RS6E_METAC  (Q8TQL4), RS6E_METAR  (Q0W8B4), RS6E_METBF  (Q466D6), 
RS6E_METBU  (Q12Z92), RS6E_METJA  (P54067), RS6E_METKA  (Q8TVE6), 
RS6E_METMA  (Q8PU79), RS6E_METS5  (A4YIY0), RS6E_METST  (Q2NGM7), 
RS6E_METTH  (O26360), RS6E_NANEQ  (Q74MJ5), RS6E_NATPD  (Q3ISW0), 
RS6E_NITMS  (A9A110), RS6E_PYRAB  (Q9UYS3), RS6E_PYRAE  (Q8ZX25), 
RS6E_PYRAR  (A4WIK0), RS6E_PYRCJ  (A3MUD0), RS6E_PYRFU  (Q8U3H8), 
RS6E_PYRHO  (O58349), RS6E_PYRIL  (A1RUW1), RS6E_PYRNV  (B1YCP4), 
RS6E_SACI2  (C3MR04), RS6E_SACI3  (C3MZ52), RS6E_SACI4  (C3MWZ2), 
RS6E_SACI6  (C4KID0), RS6E_SACI7  (C3N772), RS6E_SACS2  (Q980A6), 
RS6E_STAMF  (A3DMS1), RS6E_SULTO  (Q975N7), RS6E_THEKO  (Q5JDK8), 
RS6E_THEON  (B6YW70), RS6E_THESM  (C6A2D7), RS6_AEDAE   (Q9U761), 
RS6_AEDAL   (Q9U762), RS6_APLCA   (Q9BMX5), RS6_ASPOF   (Q9M3V8), 
RS6_BOVIN   (Q5E995), RS6_BRAFL   (O01727), RS6_CANGA   (Q6FJH3), 
RS6_CHICK   (P47838), RS6_DEBHA   (Q6BXH8), RS6_DICDI   (Q54UU3), 
RS6_DROME   (P29327), RS6_ENCCU   (Q8SRY0), RS6_EREGS   (Q74ZK3), 
RS6_GLOMM   (Q2PQM1), RS6_HUMAN   (P62753), RS6_ICTPU   (Q90YR8), 
RS6_KLULA   (Q6CM04), RS6_KLUMA   (P41798), RS6_LEIIN   (O44012), 
RS6_LEIMA   (Q9NE83), RS6_MACFA   (Q4R4K6), RS6_MANSE   (Q94624), 
RS6_MOUSE   (P62754), RS6_ONCMY   (Q9YGF2), RS6_RABIT   (G1TM55), 
RS6_RAT (P62755), RS6_SPOFR   (Q95V32), RS6_TOBAC   (P29345), 
RS6_XENLA   (P39017), RS6_YARLI   (Q6C169)
» more

UniProtKB/Swiss-Prot
False negative sequences		 17 sequences 

RS61_ARATH  (O48549), RS6E_METB6  (A7IAP8), RS6E_METHJ  (Q2FU50), 

RS6E_METLZ  (A2STM7), RS6E_METM5  (A4FWX0), RS6E_METM6  (A9AAA5), 
RS6E_METM7  (A6VGE7), RS6E_METMJ  (A3CSP5), RS6E_METMP  (Q6LXY7), 
RS6E_METPE  (B8GJR6), RS6E_METS3  (A5UJM8), RS6E_PICTO  (Q6L1H6), 
RS6E_SULAC  (Q4JAI1), RS6E_THEAC  (Q9HLA6), RS6E_THEGJ  (C5A7C4), 
RS6E_THEVO  (Q978W7), RS6_CAEEL   (Q9NEN6)
» more

UniProtKB/Swiss-Prot
False positive sequences		 3 sequences 

BCL9L_HUMAN (Q86UU0), BCL9L_MOUSE (Q67FY2), Y886_HAEIN  (P44069)


				
	

	

		PDB
[Detailed view]		
		
			441 PDB
			


			pdb_00003j16; pdb_00003j6x; pdb_00003j6y; pdb_00003j77; pdb_00003j78; pdb_00003j80; pdb_00003j81; pdb_00003jag; pdb_00003jah; pdb_00003jai; pdb_00003jam; pdb_00003jap; 
			
				pdb_00004d5l; pdb_00004d61; pdb_00004kzx; pdb_00004kzy; pdb_00004kzz; pdb_00004u3m; pdb_00004u3n; pdb_00004u3u; pdb_00004u4n; pdb_00004u4o; pdb_00004u4q; pdb_00004u4r; 
				pdb_00004u4u; pdb_00004u4y; pdb_00004u4z; pdb_00004u50; pdb_00004u51; pdb_00004u52; pdb_00004u53; pdb_00004u55; pdb_00004u56; pdb_00004u6f; pdb_00004ug0; pdb_00004v4n; 
				pdb_00004v6u; pdb_00004v6w; pdb_00004v6x; pdb_00004v88; pdb_00004v8y; pdb_00004v8z; pdb_00004v92; pdb_00005a2q; pdb_00005aj0; pdb_00005dat; pdb_00005dc3; pdb_00005dge; 
				pdb_00005dgf; pdb_00005dgv; pdb_00005fci; pdb_00005fcj; pdb_00005flx; pdb_00005i4l; pdb_00005it7; pdb_00005it9; pdb_00005jb3; pdb_00005jbh; pdb_00005juo; pdb_00005jup; 
				pdb_00005jus; pdb_00005jut; pdb_00005juu; pdb_00005k0y; pdb_00005lks; pdb_00005ll6; pdb_00005lyb; pdb_00005lzs; pdb_00005lzt; pdb_00005lzu; pdb_00005lzv; pdb_00005lzw; 
				pdb_00005lzx; pdb_00005lzy; pdb_00005lzz; pdb_00005m1j; pdb_00005mc6; pdb_00005mei; pdb_00005ndg; pdb_00005ndv; pdb_00005ndw; pdb_00005oa3; pdb_00005obm; pdb_00005on6; 
				pdb_00005osg; pdb_00005t2c; pdb_00005tbw; pdb_00005tga; pdb_00005tgm; pdb_00005tzs; pdb_00005vyc; pdb_00005wlc; pdb_00005wyj; pdb_00006az1; pdb_00006d90; pdb_00006d9j; 
				pdb_00006eml; pdb_00006fai; pdb_00006fec; pdb_00006fyx; pdb_00006fyy; pdb_00006g18; pdb_00006g4s; pdb_00006g4w; pdb_00006g51; pdb_00006g53; pdb_00006g5h; pdb_00006g5i; 
				pdb_00006gq1; pdb_00006gqb; pdb_00006gqv; pdb_00006gsm; pdb_00006gsn; pdb_00006gz3; pdb_00006hcf; pdb_00006hcj; pdb_00006hcm; pdb_00006hcq; pdb_00006hhq; pdb_00006i7o; 
				pdb_00006ip5; pdb_00006ip6; pdb_00006ip8; pdb_00006ke6; pdb_00006lqp; pdb_00006lqq; pdb_00006lqr; pdb_00006lqs; pdb_00006lqt; pdb_00006lqu; pdb_00006lqv; pdb_00006mtb; 
				pdb_00006mtc; pdb_00006mtd; pdb_00006mte; pdb_00006ole; pdb_00006olf; pdb_00006olg; pdb_00006oli; pdb_00006olz; pdb_00006om0; pdb_00006om7; pdb_00006p4g; pdb_00006p4h; 
				pdb_00006p5i; pdb_00006p5j; pdb_00006p5k; pdb_00006p5n; pdb_00006q8y; pdb_00006qzp; pdb_00006r5q; pdb_00006r6g; pdb_00006r6p; pdb_00006r7q; pdb_00006rbd; pdb_00006rbe; 
				pdb_00006s47; pdb_00006sgc; pdb_00006skf; pdb_00006skg; pdb_00006snt; pdb_00006sv4; pdb_00006sw9; pdb_00006swc; pdb_00006swd; pdb_00006t4q; pdb_00006t7i; pdb_00006t7t; 
				pdb_00006t83; pdb_00006tb3; pdb_00006th6; pdb_00006tnu; pdb_00006uz7; pdb_00006w2s; pdb_00006w2t; pdb_00006wdr; pdb_00006woo; pdb_00006xa1; pdb_00006xiq; pdb_00006xir; 
				pdb_00006xu6; pdb_00006xu7; pdb_00006xu8; pdb_00006y0g; pdb_00006y2l; pdb_00006y57; pdb_00006y7c; pdb_00006yam; pdb_00006ybw; pdb_00006z6j; pdb_00006z6k; pdb_00006z6l; 
				pdb_00006z6m; pdb_00006z6n; pdb_00006zce; pdb_00006zlw; pdb_00006zm7; pdb_00006zme; pdb_00006zmi; pdb_00006zmo; pdb_00006zmt; pdb_00006zmw; pdb_00006zn5; pdb_00006zoj; 
				pdb_00006zok; pdb_00006zon; pdb_00006zp4; pdb_00006zqb; pdb_00006zqc; pdb_00006zqd; pdb_00006zqe; pdb_00006zqf; pdb_00006zqg; pdb_00006zu9; pdb_00006zuo; pdb_00006zv6; 
				pdb_00006zvh; pdb_00006zvi; pdb_00006zvj; pdb_00006zvk; pdb_00006zxd; pdb_00006zxe; pdb_00006zxf; pdb_00006zxg; pdb_00006zxh; pdb_00007a01; pdb_00007a09; pdb_00007a1g; 
				pdb_00007ajt; pdb_00007aju; pdb_00007b7d; pdb_00007cpu; pdb_00007cpv; pdb_00007d4i; pdb_00007d5t; pdb_00007d63; pdb_00007k5i; pdb_00007ls1; pdb_00007ls2; pdb_00007mdz; 
				pdb_00007mpi; pdb_00007mpj; pdb_00007mq8; pdb_00007mq9; pdb_00007mqa; pdb_00007n8b; pdb_00007nrc; pdb_00007nrd; pdb_00007o7y; pdb_00007o7z; pdb_00007o80; pdb_00007o81; 
				pdb_00007oyd; pdb_00007pzy; pdb_00007q08; pdb_00007q0f; pdb_00007q0p; pdb_00007q0r; pdb_00007qep; pdb_00007qgg; pdb_00007qp6; pdb_00007qp7; pdb_00007qvp; pdb_00007r4x; 
				pdb_00007suk; pdb_00007toq; pdb_00007tor; pdb_00007tql; pdb_00007ucj; pdb_00007uck; pdb_00007wtl; pdb_00007wtm; pdb_00007wtn; pdb_00007wto; pdb_00007wtp; pdb_00007wtq; 
				pdb_00007wtr; pdb_00007wts; pdb_00007wtt; pdb_00007wtu; pdb_00007wtv; pdb_00007wtw; pdb_00007wtx; pdb_00007wtz; pdb_00007wu0; pdb_00007xnx; pdb_00007xny; pdb_00007zag; 
				pdb_00007zah; pdb_00007zai; pdb_00007zhg; pdb_00007zjw; pdb_00007zjx; pdb_00007zpq; pdb_00007zrs; pdb_00007zuw; pdb_00007zux; pdb_00007zw0; pdb_00008a3w; pdb_00008a98; 
				pdb_00008bhf; pdb_00008bn3; pdb_00008bqd; pdb_00008bqx; pdb_00008btk; pdb_00008c00; pdb_00008c01; pdb_00008c3a; pdb_00008c83; pdb_00008cah; pdb_00008cas; pdb_00008cbj; 
				pdb_00008ccs; pdb_00008cdl; pdb_00008cdr; pdb_00008ceh; pdb_00008cf5; pdb_00008cg8; pdb_00008cgn; pdb_00008civ; pdb_00008cku; pdb_00008cmj; pdb_00008eub; pdb_00008evp; 
				pdb_00008evq; pdb_00008evr; pdb_00008evs; pdb_00008evt; pdb_00008ewb; pdb_00008ewc; pdb_00008g5y; pdb_00008g5z; pdb_00008g60; pdb_00008g61; pdb_00008g6j; pdb_00008glp; 
				pdb_00008i7j; pdb_00008ifd; pdb_00008ife; pdb_00008jdj; pdb_00008jdk; pdb_00008jdl; pdb_00008jdm; pdb_00008k2c; pdb_00008k2d; pdb_00008k82; pdb_00008ogj; pdb_00008oh6; 
				pdb_00008oi5; pdb_00008oj3; pdb_00008ovj; pdb_00008oz0; pdb_00008p2k; pdb_00008p4v; pdb_00008p9a; pdb_00008pj1; pdb_00008pj2; pdb_00008pj3; pdb_00008pj4; pdb_00008pj5; 
				pdb_00008pj6; pdb_00008ppk; pdb_00008ppl; pdb_00008q7z; pdb_00008q87; pdb_00008qhu; pdb_00008qie; pdb_00008qoi; pdb_00008rw1; pdb_00008rxh; pdb_00008rxx; pdb_00008s8d; 
				pdb_00008s8e; pdb_00008s8f; pdb_00008s8g; pdb_00008s8h; pdb_00008s8i; pdb_00008s8j; pdb_00008s8k; pdb_00008scb; pdb_00008t2x; pdb_00008t2y; pdb_00008t2z; pdb_00008t30; 
				pdb_00008t3a; pdb_00008t3b; pdb_00008t3c; pdb_00008t3d; pdb_00008t3e; pdb_00008t3f; pdb_00008t4s; pdb_00008ukb; pdb_00008ut0; pdb_00008uti; pdb_00008vft; pdb_00008xp2; 
				pdb_00008xp3; pdb_00008xsx; pdb_00008xsy; pdb_00008xsz; pdb_00008xu8; pdb_00008xxl; pdb_00008xxm; pdb_00008xxn; pdb_00008y0u; pdb_00008y0w; pdb_00008y0x; pdb_00008yld; 
				pdb_00008ylr; pdb_00008yoo; pdb_00008yop; pdb_00008z70; pdb_00008z71; pdb_00008zdb; pdb_00008zdc; pdb_00008zdd; pdb_00009axt; pdb_00009axv; pdb_00009bdl; pdb_00009bdn; 
				pdb_00009bdp; pdb_00009bkd; pdb_00009bln; pdb_00009c3h; pdb_00009c8k; pdb_00009e71; pdb_00009e7f; pdb_00009f1b; pdb_00009f1c; pdb_00009f1d; pdb_00009f9s; pdb_00009fhl; 
				pdb_00009fra; pdb_00009frk; pdb_00009frl; pdb_00009fs6; pdb_00009fs8; pdb_00009fsf; pdb_00009fy0; pdb_00009g8m; pdb_00009g8o
			
			

			» more