PROSITE entry PS00591
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General information about the entry
Entry name [info] | GH10_1 |
Accession [info] | PS00591 |
Entry type [info] | PATTERN |
Date [info] |
01-DEC-1991 CREATED;
01-APR-2006 DATA UPDATE; 13-SEP-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00510 |
Associated ProRule [info] | PRU10061 |
Name and characterization of the entry
Description [info] | Glycosyl hydrolases family 10 (GH10) active site. |
Pattern [info] |
[GTA]-{QNAG}-{GSV}-[LIVN]-x-[IVMF]-[ST]-E-[LIY]-[DN]-[LIVMF]. |
Numerical results [info]
Total number of hits | 81 in 81 different sequences |
Number of true positive hits | 49 in 49 different sequences |
Number of 'unknown' hits | 1 |
Number of false positive hits | 31 in 31 different sequences |
Number of false negative sequences | 17 |
Number of 'partial' sequences | 4 |
Precision (true positives / (true positives + false positives)) | 61.25 % |
Recall (true positives / (true positives + false negatives)) | 74.24 % |
Comments [info]
Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses |
Maximum number of repetitions [info] | 1 |
Site [info] | active_site at position 8 |
Version [info] | 2 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
49 sequences
CEXY_THEST (P40942), GUNB_CALSA (P10474), GUNF_FUSOX (P46239), GUX_CELFI (P07986), XLNA_AGABI (O60206), XY10C_CELJA (Q59675), XYN1_ARATH (A0A1P8AWH8), XYN1_GEOSE (P40943), XYN1_RHIOR (W0HFK8), XYN2_ARATH (O80596), XYN2_CLAPU (O74717), XYN2_GEOSE (P45703), XYN3_ARATH (F4JG10), XYN4_CALSA (P23557), XYNA1_PAESJ (C6CRV0), XYNA_ASPAC (O59859), XYNA_ASPKW (P33559), XYNA_BACOV (P49942), XYNA_BUTFI (P23551), XYNA_CALSA (P23556), XYNA_CALSR (P40944), XYNA_CELJU (P14768), XYNA_HALH5 (P07528), XYNA_NAGAL (P07529), XYNA_PENCH (P29417), XYNA_PENCN (Q5S7A8), XYNA_PENSI (P56588), XYNA_PHACH (Q9HEZ1), XYNA_PRERU (P48789), XYNA_RUMFL (P29126), XYNA_STRLI (P26514), XYNA_TALPU (Q9P8J1), XYNA_THEAU (P23360), XYNA_THEMA (Q60037), XYNA_THENE (Q60042), XYNA_THESA (P36917), XYNB_BUTFI (P26223), XYNB_CELJU (P23030), XYNB_NEOPA (Q02290), XYNC_ASPNC (A2QFV7), XYNC_ASPNG (C5J411), XYNC_PAEBA (O69230), XYNC_PHACH (B7SIW2), XYND_TALFU (Q5ZNB1), XYNF1_ASPFN (B8NER4), XYNX_ACETH (P38535), XYNY_ACETH (P51584), XYNZ_ACET2 (P10478), XYN_PENCH (Q6PRW6)» more
|
UniProtKB/Swiss-Prot False negative sequences |
17 sequences
XYFA_PRER2 (D5EY13), XYN4_ARATH (Q680B7), XYN5L_ARATH (Q84WT5), XYN5_ARATH (A0A1P8B8F8), XYNA_DICTH (Q12603), XYNB_PAEBA (O69231), XYNB_THENE (Q60041), XYNC_ASPCL (A1CHQ0), XYNC_ASPFC (B0Y6E0), XYNC_ASPFU (Q0H904), XYNC_ASPTE (Q4JHP5), XYNC_ASPTN (Q0CBM8), XYNC_EMENI (Q00177), XYNC_NEOFI (A1CX14), XYNF1_ASPOR (O94163), XYNF3_ASPFN (B8NXJ2), XYNF3_ASPOR (Q96VB6)» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
4 sequences
XYNA_DICB4 (P80718), XYNA_FUSO4 (B3A0S5), XYNA_GLOTR (P84195), XYNB_DICB4 (P80717)» more |
UniProtKB/Swiss-Prot 'Unknown' sequences |
1 sequence
L_LASV (Q6GWS6) |
UniProtKB/Swiss-Prot False positive sequences |
31 sequences
BAHL1_ORYSI (A2XK56), BAHL1_ORYSJ (Q7XZZ3), CBIT_METTH (O26249), CHLB_CHLAT (Q19V92), CSMD1_HUMAN (Q96PZ7), CSMD2_HUMAN (Q7Z408), CSMD3_HUMAN (Q7Z407), CSMD3_MOUSE (Q80T79), DCA12_CHICK (Q5F3R7), DIVIB_MACCJ (B9EB52), ENGB_METMP (Q6LXQ9), ERG29_YEAST (P40207), EZRA_BACSU (O34894), FBL66_ARATH (Q9LX48), FHY3_ARATH (Q9LIE5), KCTD6_DANRE (Q6DG99), P4_PCVC (Q8JVB9), PRS39_MOUSE (O70169), PTR1_SCHPO (O13834), RL24_NATPD (Q3IMX7), RL25_STAA3 (Q2FJE0), RL25_STAAB (Q2YVY4), RL25_STAAC (Q5HIH4), RL25_STAAM (Q99WA2), RL25_STAAN (Q7A7B3), RL25_STAAR (Q6GJH0), RL25_STAAS (Q6GBY7), RL25_STAAW (Q7A1S4), URC2_LACKL (Q6YFE6), URC2_YEAST (Q04411), Y015_SIFVH (Q914L5)» more |
PDB [Detailed view] |
69 PDB
1B30; 1B31; 1B3V; 1B3W; 1B3X; 1B3Y; 1B3Z; 1BG4; 1CLX; 1E0V; 1E0W; 1E0X; 1EXP; 1FH7; 1FH8; 1FH9; 1FHD; 1GOK; 1GOM; 1GOO; 1GOQ; 1GOR; 1HIZ; 1I1W; 1I1X; 1J01; 1K6A; 1OD8; 1R85; 1R87; 1TUX; 1US2; 1US3; 1V0K; 1V0L; 1V0M; 1V0N; 1W2P; 1W2V; 1W32; 1W3H; 1XAS; 1XYZ; 2BNJ; 2DEP; 2EXO; 2HIS; 2UWF; 2W5F; 2WYS; 2WZE; 2XYL; 3CUF; 3CUG; 3CUH; 3CUI; 3CUJ; 3MMD; 3O2L; 3RDK; 3RO8; 4E4P; 4PRW; 4PUD; 4PUE; 4W8L; 4XUY; 7CPK; 7CPL » more |