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Entry: PS00597 |
Entry name [info] | PLANT_LTP |
Accession [info] | PS00597 |
Entry type [info] | PATTERN |
Date [info] |
01-DEC-1991 CREATED;
01-DEC-2004 DATA UPDATE; 10-FEB-2021 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00516 |
Description [info] | Plant lipid transfer proteins signature. |
Pattern [info] |
[LIVM]-[PA]-x(2)-C-x(1,2)-[LIVM]-x(1,2)-[LIVMST]-x-[LIVMFY]-x(1,2)- [LIVMF]-[STRD]-x(3)-[DN]-C-x(2)-[LIVM]. |
Total number of hits | 89 in 89 different sequences |
Number of true positive hits | 89 in 89 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 25 |
Number of 'partial' sequences | 15 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 78.07 % |
Taxonomic range [info] | Eukaryotes |
Maximum number of repetitions [info] | 1 |
Site [info] | disulfide at position 4 |
Site [info] | disulfide at position 16 |
Version [info] | 1 |
UniProtKB/Swiss-Prot True positive sequences |
89 sequences
LTP1_MORNI (P85894 ), NLT11_PARJU (P43217 ), NLT12_PARJU (O04404 ), NLT13_PARJU (Q40905 ), NLT21_PARJU (P55958 ), NLT22_PARJU (O04403 ), NLT2A_ORYSJ (Q7XJ39 ), NLT2B_ORYSJ (Q2QYL2 ), NLT41_HORVU (Q43767 ), NLT42_HORVU (Q43875 ), NLT43_HORVU (Q42842 ), NLTP1_AMAHP (P83167 ), NLTP1_APIGR (E6Y8S8 ), NLTP1_ARATH (Q42589 ), NLTP1_BRANA (Q42614 ), NLTP1_GOSHI (Q42762 ), NLTP1_HORVU (P07597 ), NLTP1_LENCU (A0AT28 ), NLTP1_ORYSI (A2ZHF1 ), NLTP1_ORYSJ (Q0IQK9 ), NLTP1_PEA (A0A161AT60), NLTP1_PRUAR (P81651 ), NLTP1_PRUDO (P82534 ), NLTP1_PRUDU (Q43017 ), NLTP1_PRUPE (P81402 ), NLTP1_SOLLC (P27056 ), NLTP1_SOLPN (O24037 ), NLTP1_SORBI (Q43193 ), NLTP1_TOBAC (Q42952 ), NLTP1_VIGRR (P83434 ), NLTP1_WHEAT (P24296 ), NLTP2_ARATH (Q9S7I3 ), NLTP2_BRANA (Q42615 ), NLTP2_GOSHI (Q43129 ), NLTP2_LENCU (A0AT29 ), NLTP2_ORYSI (A2ZAT0 ), NLTP2_PEA (A0A158V755), NLTP2_SOLCI (Q3YMR2 ), NLTP2_SOLLC (P93224 ), NLTP2_SOLPN (O24038 ), NLTP2_SORBI (Q43194 ), NLTP2_TOBAC (Q03461 ), NLTP3_ARATH (Q9LLR7 ), NLTP3_BRANA (Q42616 ), NLTP3_HORVU (Q43766 ), NLTP3_LENCU (A0AT30 ), NLTP3_ORYSI (A2ZAS9 ), NLTP3_ORYSJ (Q2QYL3 ), NLTP3_PEA (A0A158V976), NLTP3_PRUDU (Q43019 ), NLTP3_VITSX (P80273 ), NLTP3_WHEAT (Q84N29 ), NLTP4_ARATH (Q9LLR6 ), NLTP4_LENCU (A0AT33 ), NLTP4_ORYSJ (O65091 ), NLTP5_ARATH (Q9XFS7 ), NLTP5_LENCU (A0AT31 ), NLTP5_VITSX (P85105 ), NLTP6_ARATH (Q9LDB4 ), NLTP6_GOSHI (O24418 ), NLTP6_LENCU (A0AT32 ), NLTP8_HORVU (Q43871 ), NLTPA_ARATH (Q9LZV9 ), NLTPA_BRAOT (Q42641 ), NLTPA_RICCO (P10973 ), NLTPB_ARATH (Q2V3C1 ), NLTPB_BRAOT (Q42642 ), NLTPB_RICCO (P10974 ), NLTPC_ARATH (Q9SCZ0 ), NLTPC_RICCO (P10975 ), NLTPD_BRAOT (Q43304 ), NLTPD_RICCO (Q43119 ), NLTP_AMACA (P80450 ), NLTP_ANEGR (A0A0B4JDK1), NLTP_BETVU (Q43748 ), NLTP_CICAR (O23758 ), NLTP_CORAV (Q9ATH2 ), NLTP_DAUCA (P27631 ), NLTP_ELECO (P23802 ), NLTP_GERHY (Q39794 ), NLTP_LACSA (A0A2J6KL39), NLTP_LYCBA (B3A0N2 ), NLTP_MAIZE (P19656 ), NLTP_MALDO (Q9M5X7 ), NLTP_PINTA (Q41073 ), NLTP_PRUAV (Q9M5X8 ), NLTP_PYRCO (Q9M5X6 ), NLTP_SPIOL (P10976 ), SCA_LILLO (Q9SW93 )» more
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UniProtKB/Swiss-Prot False negative sequences |
25 sequences
ATA7_ARATH (F4JL89 ), BLT4_HORVU (P25307 ), C4_ORYSJ (Q6ZFW0 ), C6_ORYSJ (Q2R222 ), LTPG1_ARATH (Q9C7F7 ), LTPG2_ARATH (Q9LZH5 ), NLT2G_WHEAT (P82900 ), NLT2P_WHEAT (P82901 ), NLTL1_ORYSJ (Q6ASY2 ), NLTP1_ACTCC (P85204 ), NLTP1_ACTDE (P86137 ), NLTP1_HELAN (P82007 ), NLTP2_ACTDE (P85206 ), NLTP2_APIGA (P86809 ), NLTP2_HORVU (P20145 ), NLTP2_MAIZE (P83506 ), NLTP2_PRUAR (P82353 ), NLTP7_ARATH (Q9ZUK6 ), NLTP8_ARATH (Q9ZPW9 ), NLTP9_ARATH (Q6AWW0 ), NLTPD_ARATH (A8MQA2 ), NLTPE_ARATH (Q9FIT2 ), NLTPF_ARATH (Q9M0T1 ), NLTP_PEGHA (B3EWH4 ), NLTP_VIGUN (Q43681 )» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
15 sequences
AFP5_MALPA (P83139 ), NLTP1_NIGSA (P86527 ), NLTP1_VITSX (P80275 ), NLTP2_VITSX (P33556 ), NLTP2_WHEAT (P39085 ), NLTP3_SOLLC (P86417 ), NLTP4_VITSX (P80274 ), NLTPB_WHEAT (P26913 ), NLTP_ARTVU (P0C088 ), NLTP_CANSA (P86838 ), NLTP_CITLI (P84160 ), NLTP_CITSI (P84161 ), NLTP_MUSAC (P86333 ), NLTP_PINPI (P26912 ), NLTP_RAPSA (P29420 )» more |
PDB [Detailed view] |
33 PDB
1AFH; 1BE2; 1BV2; 1BWO; 1CZ2; 1FK0; 1FK1; 1FK2; 1FK3; 1FK4; 1FK5; 1FK6; 1FK7; 1GH1; 1JTB; 1LIP; 1MID; 1MZL; 1MZM; 1RZL; 1SIY; 1T12; 1UVA; 1UVB; 1UVC; 2ALG; 2B5S; 2MAL; 2N2Z; 2N81; 3GSH; 4XUW; 5LQV » more |