PROSITE entry PS00647
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General information about the entry
| Entry name [info] | THYMID_PHOSPHORYLASE |
| Accession [info] | PS00647 |
| Entry type [info] | PATTERN |
| Date [info] |
01-JUN-1992 CREATED;
01-APR-2006 DATA UPDATE; 03-MAY-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00557 |
Name and characterization of the entry
| Description [info] | Thymidine and pyrimidine-nucleoside phosphorylases signature. |
| Pattern [info] |
[SA]-[GS]-R-[GA]-[LIV]-x(2)-[TAP]-[GAS]-G-T-x-D-x-[LIVMF]-[EDS]. |
Numerical results [info]
| Total number of hits | 181 in 181 different sequences |
| Number of true positive hits | 181 in 181 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 1 |
| Number of 'partial' sequences | 2 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 99.45 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 2 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
181 sequences
AMPP1_ARCFU (O28928 ), AMPP2_ARCFU (O28927 ), AMPPA_HYPBU (A2BJU0 ), AMPPA_META3 (A6UUN0 ), AMPPA_METAC (Q8TL01 ), AMPPA_METB6 (A7I5N0 ), AMPPA_METBF (Q466X0 ), AMPPA_METBU (Q12Z64 ), AMPPA_METHJ (Q2FTS5 ), AMPPA_METJA (Q58081 ), AMPPA_METLZ (A2SPI9 ), AMPPA_METM5 (A4FZL0 ), AMPPA_METM6 (A9A6M7 ), AMPPA_METM7 (A6VIW6 ), AMPPA_METMA (Q8Q0P9 ), AMPPA_METMJ (A3CSY4 ), AMPPA_METMP (Q6M0E4 ), AMPPA_METTP (A0B6C9 ), AMPPA_METVS (A6URW3 ), AMPPA_NATPD (Q3IP82 ), AMPPA_PYRAB (Q9V163 ), AMPPA_PYRFU (Q8U0I2 ), AMPPA_PYRHO (O59251 ), AMPPA_THEGJ (C5A1L9 ), AMPPA_THEKO (Q5JCX3 ), AMPPA_THEON (B6YWT7 ), AMPPA_THEPD (A1RWC3 ), AMPPA_THESM (C6A2A0 ), PDP_BACSU (P39142 ), PDP_GEOSE (P77836 ), PDP_STAA3 (Q2FEZ3 ), PDP_STAA8 (Q2FWC1 ), PDP_STAAB (Q2YUL7 ), PDP_STAAC (Q5HE64 ), PDP_STAAM (Q99SC3 ), PDP_STAAN (Q7A4D0 ), PDP_STAAR (Q6GET9 ), PDP_STAAS (Q6G7H4 ), PDP_STAAW (Q8NVF6 ), PDP_STAEQ (Q5HM85 ), PDP_STAES (Q8CNH8 ), PDP_STAHJ (Q4L818 ), RBKTP_AZOC5 (A8IA58 ), RBKTP_CUPNH (Q0K3R9 ), RBKTP_CUPPJ (Q46UT0 ), RBKTP_CUPTR (B2AIF3 ), RBKTP_ROSDO (Q16A32 ), TYPH1_ACISJ (A1W631 ), TYPH1_CUPNH (Q0KA59 ), TYPH2_ACISJ (A1W9B0 ), TYPH2_CUPPJ (Q46S32 ), TYPH_AERHH (A0KPE3 ), TYPH_AERS4 (A4SRU3 ), TYPH_AGRFC (Q8UJ08 ), TYPH_ALBFT (Q21W90 ), TYPH_ALIF1 (Q5E7J6 ), TYPH_ALIFM (B5FA99 ), TYPH_ALISL (B6ENG4 ), TYPH_BRADU (Q89QK7 ), TYPH_BRASB (A5EG87 ), TYPH_BRASO (A4YRL1 ), TYPH_BURCH (A0KCQ9 ), TYPH_BURCJ (B4EPB7 ), TYPH_BURL3 (Q39PA6 ), TYPH_BURM7 (A3MAQ6 ), TYPH_BURMA (Q62EC5 ), TYPH_BURMS (A1UY21 ), TYPH_BURO0 (B1KC83 ), TYPH_BURO1 (Q1BV59 ), TYPH_BURP0 (A3P8N2 ), TYPH_BURP6 (A3NN77 ), TYPH_BURPS (Q63IV6 ), TYPH_CHESB (Q11BH8 ), TYPH_CHRVO (Q7NRT0 ), TYPH_COLP3 (Q483R6 ), TYPH_CROS8 (A7MGA9 ), TYPH_ECO24 (A7ZVS5 ), TYPH_ECO27 (B7UR10 ), TYPH_ECO45 (B7MNI9 ), TYPH_ECO55 (B7LEM8 ), TYPH_ECO57 (Q8XB35 ), TYPH_ECO5E (B5Z4R4 ), TYPH_ECO7I (B7NW62 ), TYPH_ECO81 (B7MTC8 ), TYPH_ECO8A (B7LXU4 ), TYPH_ECODH (B1XFJ2 ), TYPH_ECOHS (A8A8B1 ), TYPH_ECOL6 (Q8FA52 ), TYPH_ECOLC (B1IS37 ), TYPH_ECOLI (P07650 ), TYPH_ECOLU (B7NH50 ), TYPH_ECOSE (B6I6M9 ), TYPH_ECOSM (B1LEI7 ), TYPH_ENT38 (A4W699 ), TYPH_ERWT9 (B2VH51 ), TYPH_ESCF3 (B7LNS2 ), TYPH_HAHCH (Q2SLV0 ), TYPH_HUMAN (P19971 ), TYPH_IDILO (Q5QXT8 ), TYPH_KLEP3 (B5Y276 ), TYPH_KLEP7 (A6THZ7 ), TYPH_LEGPA (Q5X2M8 ), TYPH_LEGPC (A5IFN1 ), TYPH_LEGPH (Q5ZWR3 ), TYPH_LEGPN (Q8RNP4 ), TYPH_MARMM (Q0ATA0 ), TYPH_METCA (Q607P2 ), TYPH_MYCGE (P47297 ), TYPH_MYCPI (P47717 ), TYPH_MYCPN (P75052 ), TYPH_MYCTO (P9WFS0 ), TYPH_MYCTU (P9WFS1 ), TYPH_NITHX (Q1QM39 ), TYPH_PARL1 (A7HYS8 ), TYPH_PECAS (Q6D991 ), TYPH_PHOPR (Q6LUH3 ), TYPH_POLSJ (Q12E97 ), TYPH_PROMH (B4EWA3 ), TYPH_PSYIN (A1SYK5 ), TYPH_RALSO (Q8Y2X7 ), TYPH_RHILO (Q98GV5 ), TYPH_RHIME (Q92T50 ), TYPH_RHOP5 (Q07J10 ), TYPH_RHOPA (Q6N2A3 ), TYPH_RHOPB (Q20Z21 ), TYPH_RHOPS (Q13B59 ), TYPH_RHOPT (B3QKL9 ), TYPH_SALA4 (B5F525 ), TYPH_SALAR (A9MRA6 ), TYPH_SALCH (Q57G40 ), TYPH_SALDC (B5FTC6 ), TYPH_SALEP (B5R2J7 ), TYPH_SALG2 (B5R9V0 ), TYPH_SALHS (B4TH00 ), TYPH_SALNS (B4T4H1 ), TYPH_SALPA (Q5PK22 ), TYPH_SALPK (B5BAJ8 ), TYPH_SALSV (B4TU42 ), TYPH_SALTI (Q8XF46 ), TYPH_SALTY (Q7CP66 ), TYPH_SERP5 (A8G9H7 ), TYPH_SHEAM (A1S475 ), TYPH_SHEB2 (B8E6P5 ), TYPH_SHEB5 (A3D7J3 ), TYPH_SHEB8 (A6WRB7 ), TYPH_SHEB9 (A9KZ79 ), TYPH_SHEDO (Q12QG2 ), TYPH_SHEFN (Q086F9 ), TYPH_SHEHH (B0TQ90 ), TYPH_SHELP (A3QGT2 ), TYPH_SHEON (Q8EHK3 ), TYPH_SHEPA (A8H727 ), TYPH_SHEPC (A4Y9A7 ), TYPH_SHEPW (B8CKI5 ), TYPH_SHESA (A0KU08 ), TYPH_SHESH (A8FYQ8 ), TYPH_SHESM (Q0HLE9 ), TYPH_SHESR (Q0HXQ3 ), TYPH_SHESW (A1RH88 ), TYPH_SHEWM (B1KRP7 ), TYPH_SHIB3 (B2TZR5 ), TYPH_SHIBS (Q31SV7 ), TYPH_SHIDS (Q327L4 ), TYPH_SHIF8 (Q0SX29 ), TYPH_SHIFL (Q83P01 ), TYPH_SHISS (Q3YU11 ), TYPH_SINFN (C3MBH0 ), TYPH_SINMW (A6UET3 ), TYPH_SODGM (Q2NW05 ), TYPH_SPHAL (Q1GQ92 ), TYPH_STUS1 (A4VHV6 ), TYPH_TOLAT (C4LAA1 ), TYPH_VIBCH (Q9KPL8 ), TYPH_VIBPA (Q87M23 ), TYPH_VIBVU (Q8DBT1 ), TYPH_VIBVY (Q7MI39 ), TYPH_YERE8 (A1JJ98 ), TYPH_YERP3 (A7FMH4 ), TYPH_YERPE (Q74PY8 ), TYPH_YERPS (Q66EV9 ), TYPH_YERPY (B1JL36 )» more
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| UniProtKB/Swiss-Prot False negative sequences |
1 sequence
AMPPA_METAR (Q0W5A8 ) |
| UniProtKB/Swiss-Prot 'Partial' sequences |
2 sequences
TYPH_LACRH (P19663 ), TYPH_METHO (P43050 ) |
| PDB [Detailed view] |
23 PDB
1AZY; 1BRW; 1OTP; 1TPT; 1UOU; 2J0F; 2TPT; 2WK5; 2WK6; 3H5Q; 4EAD; 4EAF; 4GA4; 4GA5; 4GA6; 4LHM; 4X46; 4XR5; 4YEK; 4YYY; 5EP8; 5EY3; 5OLN » more |