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PROSITE entry PS00648
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General information about the entry
Entry name [info] | RIBONUCLEASE_P |
Accession [info] | PS00648 |
Entry type [info] | PATTERN |
Date [info] |
01-JUN-1992 CREATED;
01-DEC-2004 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00558 |
Name and characterization of the entry
Description [info] | Bacterial ribonuclease P protein component signature. |
Pattern [info] |
[LIVMFYSNAD]-x(2)-A-x(2)-R-[NH]-[KRQLYAT]-[LIVMFSA]-[KRA]-R-x-[LIVMTA]- [KR]. |
Numerical results [info]
Total number of hits | 377 in 377 different sequences |
Number of true positive hits | 374 in 374 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 3 in 3 different sequences |
Number of false negative sequences | 133 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 99.20 % |
Recall (true positives / (true positives + false negatives)) | 73.77 % |
Comments [info]
Taxonomic range [info] | Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
374 sequences
RNPA_ACHLI (A9NE63), RNPA_ACIAD (Q6F6K8), RNPA_ACIBS (B0VQP7), RNPA_ACIBY (B0V5R2), RNPA_ACIC1 (A0LWX2), RNPA_AERHH (A0KQZ9), RNPA_AERS4 (A4STS7), RNPA_ALIF1 (Q5E8Z7), RNPA_ALISL (B6EP41), RNPA_ANOFW (B7GMW3), RNPA_AROAE (Q5P4P2), RNPA_ARTS2 (A0K2M6), RNPA_AZOSB (A1KCQ1), RNPA_BACAA (C3P3F8), RNPA_BACAC (C3LGU4), RNPA_BACAN (Q81JH0), RNPA_BACC0 (B7JIL4), RNPA_BACC1 (Q72WU0), RNPA_BACC2 (B7IST7), RNPA_BACC3 (C1ER80), RNPA_BACC4 (B7H7A5), RNPA_BACC7 (B7HZH3), RNPA_BACCN (A7GVQ0), RNPA_BACCQ (B9IT45), RNPA_BACCR (Q814F3), RNPA_BACCZ (Q630B5), RNPA_BACHK (Q6HAE9), RNPA_BACMK (A9VTM3), RNPA_BACP2 (A8FJG3), RNPA_BACSU (P25814), RNPA_BACVZ (A7ZAW4), RNPA_BARHE (Q6G2G7), RNPA_BARQU (Q6FZ17), RNPA_BEUC1 (C5C6N8), RNPA_BLOPB (Q494B8), RNPA_BORA1 (Q2KTI7), RNPA_BORBR (Q7WDJ7), RNPA_BORPA (Q7W2K3), RNPA_BORPD (A9IJC1), RNPA_BORPE (Q7VSD8), RNPA_BREBN (C0ZA70), RNPA_BRUA4 (A6WYM5), RNPA_BRUC2 (A9MCU8), RNPA_BRUMB (C0RMG2), RNPA_BRUME (Q8YDA2), RNPA_BRUSI (A9WW33), RNPA_BRUSU (Q8FV30), RNPA_BUCAI (P57130), RNPA_BUCAP (P29433), RNPA_BUCBP (P59413), RNPA_BURM7 (A3MS22), RNPA_BURM9 (A2S8D4), RNPA_BURMA (Q62EM2), RNPA_BURMS (A1V7D7), RNPA_BURP0 (A3NPW9), RNPA_BURP6 (A3N475), RNPA_BURPS (Q63YW3), RNPA_CAMJ8 (A8FM14), RNPA_CAMJD (A7H368), RNPA_CAMJE (Q9PNX5), RNPA_CAMJJ (A1VZV1), RNPA_CAMJR (Q5HUJ9), RNPA_CARHZ (Q3AG60), RNPA_CAUVC (Q9AA39), RNPA_CAUVN (B8H1E9), RNPA_CHESB (Q11LE6), RNPA_CHLAA (A9WBG7), RNPA_CHLAB (Q5L548), RNPA_CHLAD (B8G7S5), RNPA_CHLCV (Q821V0), RNPA_CHLFF (Q255T8), RNPA_CHLMU (Q9PLD7), RNPA_CHLPD (A1BJZ9), RNPA_CHLSY (B9LGI0), RNPA_CHLT2 (B0B910), RNPA_CHLTA (Q3KKQ8), RNPA_CHLTB (B0BAN9), RNPA_CHLTE (Q8KGG4), RNPA_CHLTR (O84789), RNPA_CHRSD (Q1QS97), RNPA_CHRVO (Q7NPT6), RNPA_CITK8 (A8ACL6), RNPA_CLAM3 (A5CVC5), RNPA_CLOD6 (Q181T2), RNPA_COXBN (A9KBT3), RNPA_COXBR (A9NBA3), RNPA_COXBU (P45648), RNPA_CROS8 (A7MN01), RNPA_CYAP4 (B8HR50), RNPA_DEHM1 (Q3Z7P1), RNPA_DEHMC (Q3ZY16), RNPA_DEIGD (Q1IY22), RNPA_DEIRA (Q9RSH3), RNPA_DESAH (C0QIZ3), RNPA_DESAL (B8FMU9), RNPA_DESDA (B8J2U6), RNPA_DESOH (A8ZRZ3), RNPA_DESPS (Q6APZ0), RNPA_DESRM (A4J9S4), RNPA_DICT6 (B5YBN8), RNPA_DICTD (B8DYS1), RNPA_ECO24 (A7ZTR0), RNPA_ECO27 (B7UMH1), RNPA_ECO45 (B7MGC5), RNPA_ECO55 (B7L844), RNPA_ECO57 (Q8XB43), RNPA_ECO5E (B5YXA8), RNPA_ECO7I (B7NR06), RNPA_ECO81 (B7N2E9), RNPA_ECO8A (B7M556), RNPA_ECOBW (C4ZYY1), RNPA_ECODH (B1X9T2), RNPA_ECOHS (A8A6G5), RNPA_ECOK1 (A1AHN8), RNPA_ECOL6 (Q8FBV5), RNPA_ECOLI (P0A7Y8), RNPA_ECOLU (B7NF21), RNPA_ECOSE (B6I3T7), RNPA_ECOSM (B1LL31), RNPA_ECOUT (Q1R4N2), RNPA_EDWI9 (C5BF62), RNPA_ENTFA (Q82YV0), RNPA_ERWT9 (B2VCE5), RNPA_ESCF3 (B7LK46), RNPA_EXIS2 (B1YGB0), RNPA_EXISA (C4KZZ5), RNPA_FINM2 (B0S3V6), RNPA_GEOKA (Q5KU54), RNPA_GEOSW (C5D9Z1), RNPA_GEOTN (A4ITX4), RNPA_GLOC7 (B7KHE3), RNPA_HAEDU (Q7VN34), RNPA_HAEI8 (Q4QLR2), RNPA_HAEIG (A5UID3), RNPA_HAEIN (P44306), RNPA_HALH5 (Q9RCA4), RNPA_HALHL (A1WWE2), RNPA_HAMD5 (C4K7P7), RNPA_HELAH (Q17ZA3), RNPA_HELHP (Q7VJX7), RNPA_HELP2 (B6JNU5), RNPA_HELPH (Q1CRI1), RNPA_HELPJ (Q9ZJH0), RNPA_HELPS (B2UVJ3), RNPA_HELPY (P55997), RNPA_IDILO (Q5QZK1), RNPA_KLEP3 (B5XZP6), RNPA_KOCRD (B2GJF5), RNPA_LACLA (Q9CJ73), RNPA_LACLM (A2RHL3), RNPA_LACLS (Q032X2), RNPA_LATSS (Q38UE4), RNPA_LEGPA (Q5X0M0), RNPA_LEGPC (A5IIK5), RNPA_LEGPL (Q5WSE7), RNPA_LISIN (Q926Q4), RNPA_LISMC (C1L0I8), RNPA_LISMF (Q71VQ7), RNPA_LISMH (B8DCV5), RNPA_LISMO (Q8Y3I1), RNPA_LISW6 (A0AMG4), RNPA_MACCJ (B9E8Z6), RNPA_MALP2 (Q8EU90), RNPA_MARMS (A6W3V2), RNPA_MARN8 (A1U7J6), RNPA_MESFL (Q6F0D5), RNPA_METCA (Q602M8), RNPA_MICAN (B0JN62), RNPA_MICLC (C5C7X2), RNPA_MICLU (P21172), RNPA_MYCA1 (A0QND4), RNPA_MYCBO (P0A5X9), RNPA_MYCCT (P43039), RNPA_MYCGE (P47703), RNPA_MYCLB (B8ZTN6), RNPA_MYCLE (P46610), RNPA_MYCM1 (Q6KH14), RNPA_MYCMM (B2HNT8), RNPA_MYCMS (Q6MRS3), RNPA_MYCPA (Q9L7L9), RNPA_MYCPN (P75111), RNPA_MYCTO (P9WGZ2), RNPA_MYCTU (P9WGZ3), RNPA_MYCUA (A0PX70), RNPA_NEIG1 (Q5F4W3), RNPA_NEIG2 (B4RJJ5), RNPA_NEIMA (Q9JW46), RNPA_NEIMB (Q9JXS6), RNPA_NEIMF (A1KS00), RNPA_NITOC (Q3J6L7), RNPA_NITSB (A6Q3D2), RNPA_NOCFA (Q5YMR7), RNPA_NOCSJ (A1SQV9), RNPA_OCEIH (Q8EKU0), RNPA_ONYPE (Q6YQX5), RNPA_PARS2 (A8L8W2), RNPA_PARXL (Q13SH2), RNPA_PECAS (Q6CYR1), RNPA_PELTS (A5CY49), RNPA_PETMO (A9BJC4), RNPA_PHOLL (Q7M7H7), RNPA_PHYAS (B1VAN7), RNPA_PICP2 (B1XJD2), RNPA_PORG3 (B2RHI3), RNPA_PORGI (Q7MXI4), RNPA_PROMH (B4F0U3), RNPA_PROMI (P22835), RNPA_PSEA6 (Q15MS5), RNPA_PSEA7 (A6VF46), RNPA_PSEA8 (B7V7A6), RNPA_PSEAB (Q02DD9), RNPA_PSEAE (Q9HT05), RNPA_PSEAO (O86449), RNPA_PSECP (B8H8Z3), RNPA_PSEE4 (Q1I2H2), RNPA_PSEMY (A4Y1A2), RNPA_PSEP1 (A5WBB9), RNPA_PSEPG (B0KEU7), RNPA_PSEPK (P0A167), RNPA_PSEPU (P0A168), RNPA_PSET1 (Q3IK52), RNPA_PSYIN (A1T0M7), RNPA_PSYWF (A5WI39), RNPA_RHILO (Q98D89), RNPA_RHOE4 (C0ZVP7), RNPA_RHOJR (Q0SAG9), RNPA_RHOOB (C1B7S5), RNPA_RICAE (C3PP52), RNPA_RICAH (A8GP91), RNPA_RICB8 (A8GVL0), RNPA_RICBR (Q1RI66), RNPA_RICCK (A8EY59), RNPA_RICCN (Q92H35), RNPA_RICFE (Q4UML0), RNPA_RICPR (Q9ZCU8), RNPA_RICPU (C4K1K8), RNPA_RICRO (B0BUJ2), RNPA_RICRS (A8GT00), RNPA_RICTY (Q68WC8), RNPA_RIPO1 (B7K5U5), RNPA_ROSCS (A7NJ53), RNPA_ROSS1 (A5V0B3), RNPA_RUEPO (Q5LW06), RNPA_SACD2 (Q21DF8), RNPA_SALA4 (B5EYX4), RNPA_SALAI (A8LXK4), RNPA_SALAR (A9MJT8), RNPA_SALDC (B5FN12), RNPA_SALEP (B5QUQ2), RNPA_SALG2 (B5RFY5), RNPA_SALHS (B4TAV1), RNPA_SALNS (B4SYB0), RNPA_SALPA (Q5PKU4), RNPA_SALPK (B5BIL6), RNPA_SALSV (B4TN09), RNPA_SALTI (P66687), RNPA_SALTO (A4XDK4), RNPA_SALTY (P66686), RNPA_SERP5 (A8G7Q0), RNPA_SHEAM (A1S1G7), RNPA_SHEB2 (B8EDW7), RNPA_SHEB5 (A3DAT0), RNPA_SHEB8 (A6WUK6), RNPA_SHEB9 (A9KX22), RNPA_SHEDO (Q12HM6), RNPA_SHEFN (Q07VS4), RNPA_SHEON (Q8EKT4), RNPA_SHEPC (A4YCM4), RNPA_SHESA (A0KR34), RNPA_SHESM (Q0HD62), RNPA_SHESR (Q0HPE4), RNPA_SHESW (A1RQF1), RNPA_SHEWM (B1KQ67), RNPA_SHIB3 (B2TUS4), RNPA_SHIBS (Q31UV7), RNPA_SHIDS (Q329B4), RNPA_SHIFL (P0A7Y9), RNPA_SHISS (Q3YWB0), RNPA_SHOC1 (Q5WAG0), RNPA_SODGM (Q2NQ69), RNPA_STAA1 (A7X7A9), RNPA_STAA2 (A6U596), RNPA_STAA3 (Q2FDE7), RNPA_STAA8 (Q2FUQ1), RNPA_STAA9 (A5IWD8), RNPA_STAAB (Q2YZB7), RNPA_STAAC (Q5HCI2), RNPA_STAAM (P66688), RNPA_STAAN (P66689), RNPA_STAAR (Q6GD91), RNPA_STAAS (Q6G5W3), RNPA_STAAT (A8YYS2), RNPA_STAAU (P0A0H5), RNPA_STAAW (P0A0H4), RNPA_STACT (B9DI94), RNPA_STAEQ (Q5HS37), RNPA_STAES (Q8CMN4), RNPA_STAHJ (Q4L2Z1), RNPA_STRA1 (Q3K2X6), RNPA_STRA3 (Q8E6W5), RNPA_STRA5 (Q8E1E7), RNPA_STRAW (Q82FE0), RNPA_STRBI (P25817), RNPA_STRCO (P48206), RNPA_STRE4 (C0M7E1), RNPA_STREM (B4U0S7), RNPA_STRM5 (B4SPG1), RNPA_STRMU (Q8DVX4), RNPA_STRP1 (Q9A1J4), RNPA_STRP2 (Q04ID0), RNPA_STRP3 (P0DF24), RNPA_STRP4 (B5E2W2), RNPA_STRP6 (Q5XDZ0), RNPA_STRP7 (C1CA87), RNPA_STRP8 (P66691), RNPA_STRPB (Q1JDN4), RNPA_STRPC (Q1JNK3), RNPA_STRPD (Q1JIQ1), RNPA_STRPF (Q1J8K9), RNPA_STRPG (A2RCF8), RNPA_STRPI (B1I998), RNPA_STRPJ (B8ZPA3), RNPA_STRPM (Q48VE1), RNPA_STRPN (Q97NI5), RNPA_STRPQ (P0DF25), RNPA_STRPS (B2IML6), RNPA_STRPZ (B5XJN7), RNPA_STRR6 (Q8DN92), RNPA_STRS7 (C0MFG8), RNPA_STRT1 (Q5LY00), RNPA_STRT2 (Q5M2K4), RNPA_STRTD (Q03IQ0), RNPA_STRU0 (B9DVV7), RNPA_STRZJ (C1CGX2), RNPA_STRZP (C1CMY8), RNPA_STRZT (C1CTU8), RNPA_SYMTH (Q67J29), RNPA_SYNAS (Q2LSG2), RNPA_SYNFM (A0LLH1), RNPA_SYNJA (Q2JQX0), RNPA_SYNJB (Q2JHS3), RNPA_SYNWW (Q0ATU2), RNPA_SYNY3 (Q55005), RNPA_THEAQ (Q7X5L4), RNPA_THEBO (Q7X5L6), RNPA_THEFI (Q7X5L2), RNPA_THEMA (Q9X1H4), RNPA_THEP1 (A5IMC2), RNPA_THESC (Q7X5K8), RNPA_THESQ (B1LBK1), RNPA_THET2 (Q72LI2), RNPA_THET8 (Q7X5K6), RNPA_UREP2 (B1AJP4), RNPA_UREPA (Q9PPN6), RNPA_UREU1 (B5ZCB8), RNPA_VIBC1 (A7N1E4), RNPA_VIBPA (Q87TR4), RNPA_VIBVU (Q8DDI3), RNPA_VIBVY (Q7MQK4), RNPA_XANAC (Q8PEH6), RNPA_XANC8 (Q4UNK7), RNPA_XANCB (B0RMM7), RNPA_XANCP (Q8P337), RNPA_XANE5 (Q3BLZ6), RNPA_XANOM (Q2NX51), RNPA_XYLFA (Q9P9U0), RNPA_XYLFT (Q879S2), RNPA_YERE8 (A1JT84), RNPA_YERP3 (A7FPB9), RNPA_YERPA (Q1C0B6), RNPA_YERPE (Q8Z9U4), RNPA_YERPN (Q1CCJ6), RNPA_YERPP (A4TSL3), RNPA_YERPS (Q663S9)» more
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UniProtKB/Swiss-Prot False negative sequences |
133 sequences
RNPA_AGRFC (Q8UIB2), RNPA_ALCBS (Q0VKU6), RNPA_ALKMQ (A6TXE9), RNPA_ALKOO (A8MKS3), RNPA_AZOVD (C1DNF9), RNPA_BAUCH (Q1LTW1), RNPA_BIFA0 (B8DV04), RNPA_BIFAA (A1A3X8), RNPA_BIFLD (B3DP24), RNPA_BIFLO (Q8G6J8), RNPA_BIFLS (B7GPF7), RNPA_BLOFL (Q7VQV1), RNPA_BORAP (Q0SN68), RNPA_BORBU (P50069), RNPA_BORBZ (B7J207), RNPA_BORDL (B5RLZ8), RNPA_BORGP (Q661I0), RNPA_BORHD (B2S0E4), RNPA_BORRA (B5RRP4), RNPA_BORT9 (A1QZM7), RNPA_CALS4 (Q8R6K4), RNPA_CHLPN (Q9Z6X2), RNPA_CITBB (B5EGY0), RNPA_CLOAB (Q97CV8), RNPA_CLOB1 (A7FPL5), RNPA_CLOB6 (C3KWJ9), RNPA_CLOB8 (A6M3M9), RNPA_CLOBA (B2V1V3), RNPA_CLOBB (B2TRI3), RNPA_CLOBH (A5I820), RNPA_CLOBJ (C1FP35), RNPA_CLOBK (B1IHS3), RNPA_CLOBL (A7GJP3), RNPA_CLOBM (B1KUB6), RNPA_CLOK5 (A5N455), RNPA_CLONN (A0PX73), RNPA_CLOP1 (Q0TLZ0), RNPA_CLOPE (Q8XH26), RNPA_CLOPS (Q0SPP9), RNPA_COPPD (B5Y9B9), RNPA_CORA7 (C3PL13), RNPA_CORDI (Q6NE96), RNPA_COREF (Q8FSU8), RNPA_CORGB (A4QIE5), RNPA_CORGL (Q8NL51), RNPA_CORJK (Q4JSC2), RNPA_CORU7 (B1VJ37), RNPA_ERYLH (Q2N7X0), RNPA_FUSNN (Q8RHA6), RNPA_GEOSM (C6DYS3), RNPA_GEOUR (A5G9V6), RNPA_GLUDA (A9HKS8), RNPA_GLUOX (Q5FPY1), RNPA_HERA2 (A9AXK0), RNPA_HISS1 (Q0I0Y9), RNPA_HISS2 (B0URU5), RNPA_KINRD (A6WGN2), RNPA_LACAC (Q5FHQ3), RNPA_LACCB (B3WBV6), RNPA_LACDA (Q1G7Z2), RNPA_LACDB (Q047F7), RNPA_LACGA (Q040F1), RNPA_LACH4 (A8YTQ9), RNPA_LACJO (Q74H92), RNPA_LACP7 (A9KLY3), RNPA_LACPL (Q88RX0), RNPA_LEUCK (B1MWS3), RNPA_LEUMM (Q03UI9), RNPA_LEVBA (Q03N61), RNPA_LIGS1 (Q1WRF9), RNPA_LIMF3 (B2GEU6), RNPA_LIMRD (A5VMV1), RNPA_LIMRJ (B2GA53), RNPA_MANSM (Q65VC0), RNPA_MARSD (C6C0J4), RNPA_MESH7 (Q4A750), RNPA_MESHJ (Q4A913), RNPA_MYCA9 (B1MN96), RNPA_MYCGI (A4T4T3), RNPA_MYCPU (Q98R57), RNPA_MYCS5 (Q4A5G4), RNPA_MYCSJ (A3Q8S4), RNPA_MYCSK (A1U8R8), RNPA_MYCSS (Q1B0S2), RNPA_MYCVP (A1TI29), RNPA_NATTJ (B2A474), RNPA_NITEC (Q0AE58), RNPA_NITEU (Q82X99), RNPA_NOSP7 (B2J0Q5), RNPA_NOSS1 (Q8YRN1), RNPA_OENOB (Q04CX7), RNPA_OLEA2 (Q30YQ3), RNPA_PARM1 (Q2VZ17), RNPA_PARMW (Q7U524), RNPA_PASMU (P57915), RNPA_PEDPA (Q03D57), RNPA_PHOPR (Q6LW54), RNPA_PROM0 (A3PE33), RNPA_PROM1 (A2C405), RNPA_PROM2 (A8G5Y2), RNPA_PROM3 (A2C7A3), RNPA_PROM4 (A9BBJ0), RNPA_PROM5 (A2BXQ2), RNPA_PROM9 (Q319V1), RNPA_PROMA (Q7TVA1), RNPA_PROMM (Q7V612), RNPA_PROMS (A2BSA0), RNPA_PROMT (Q46JN4), RNPA_PSE14 (Q48BF0), RNPA_PSEPF (Q3K426), RNPA_PSESM (Q87TR9), RNPA_RALPJ (B2U822), RNPA_RHIJ3 (Q1MM57), RNPA_RHIME (Q92SF4), RNPA_RHOBA (Q7UNR1), RNPA_STRGC (A8AUN9), RNPA_STRGG (B1VPE8), RNPA_STUS1 (A4VS84), RNPA_SYNE7 (Q31MS4), RNPA_SYNP6 (Q5N605), RNPA_SYNPW (A5GN10), RNPA_SYNR3 (A5GRN3), RNPA_SYNS9 (Q3AV41), RNPA_THEFY (Q47K73), RNPA_THEOS (Q7X5L0), RNPA_THEP3 (B0K8I3), RNPA_THEPX (B0K5N8), RNPA_THISH (B8GRD3), RNPA_TRIV2 (Q3M7J6), RNPA_VESOH (A5CVI0), RNPA_VIBC3 (A5F483), RNPA_VIBCH (Q9KVY2), RNPA_VIBCM (C3LP79)» more |
UniProtKB/Swiss-Prot False positive sequences |
3 sequences
SCN1A_HUMAN (P35498), SCN1A_MOUSE (A2APX8), SCN1A_RAT (P04774) |
PDB [Detailed view] |
15 PDB
1A6F; 1D6T; 1NZ0; 2LJP; 3Q1Q; 3Q1R; 4JG4; 6CQC; 6D1R; 6MAX; 6OV1; 7UO0; 7UO1; 7UO2; 7UO5 » more |