PROSITE entry PS00696

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General information about the entry

Entry name [info]	ETF_ALPHA
Accession [info]	PS00696
Entry type [info]	PATTERN
Date [info]	01-DEC-1992 CREATED; 01-DEC-2004 DATA UPDATE; 08-NOV-2023 INFO UPDATE.
PROSITE Doc. [info]	PDOC00583

Name and characterization of the entry

Description [info]	Electron transfer flavoprotein alpha-subunit signature.
Pattern [info]	[LI]-Y-[LIVM]-[AT]-x-[GA]-[IV]-[SD]-G-x-[IV]-Q-[HP]-x(2)-G-x(6)-[IV]-x-A- [IV]-N.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_05 which contains 570'420 sequence entries.

Total number of hits	66 in 66 different sequences
Number of true positive hits	66 in 66 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	3
Number of 'partial' sequences	1

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	95.65 %

Comments [info]

Taxonomic range [info]	Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info]	1
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot True positive sequences	66 sequences ETFA_ARATH (Q9C6I6), ETFA_BACSU (P94551), ETFA_BOVIN (Q2KJE4), ETFA_BRADU (P53573), ETFA_CAEEL (Q93615), ETFA_CLOAB (P52039), ETFA_CRYGW (Q5Y223), ETFA_CRYNB (P0CN61), ETFA_CRYNJ (P0CN60), ETFA_CRYNV (Q8J112), ETFA_DICDI (Q54FD7), ETFA_HUMAN (P13804), ETFA_MACFA (Q8HXY0), ETFA_MEGEL (O85692), ETFA_METME (P53571), ETFA_MOUSE (Q99LC5), ETFA_MYCLE (O33096), ETFA_MYCTO (P9WNG8), ETFA_MYCTU (P9WNG9), ETFA_ORYSI (A2XNR6), ETFA_ORYSJ (Q75LJ3), ETFA_PARDE (P38974), ETFA_PONAB (Q5RC31), ETFA_PSEAE (Q9HZP7), ETFA_RAT(P13803), ETFA_SCHPO (P78790), ETFA_SYNWW (Q0AZ33), ETFA_THETC (P71153), ETFA_YEAST (Q12480), FIXB_AZOC5 (P26483), FIXB_AZOVI (P53574), FIXB_BRADU (P10449), FIXB_CLOSA (P53578), FIXB_ECO24 (A7ZHD5), FIXB_ECO27 (B7UI88), FIXB_ECO45 (B7MAG5), FIXB_ECO55 (B7L4G5), FIXB_ECO57 (Q8XA27), FIXB_ECO5E (B5YYD6), FIXB_ECO7I (B7NHE6), FIXB_ECO81 (B7MNP9), FIXB_ECO8A (B7M0D9), FIXB_ECOBW (C4ZPW8), FIXB_ECODH (B1XBG7), FIXB_ECOHS (A7ZVZ4), FIXB_ECOK1 (A1A792), FIXB_ECOL5 (Q0TLU7), FIXB_ECOL6 (P59674), FIXB_ECOLC (B1IRD4), FIXB_ECOLI (P31574), FIXB_ECOLU (B7N7R7), FIXB_ECOSE (B6HYZ3), FIXB_ECOSM (B1LFX6), FIXB_ECOUT (Q1RGF6), FIXB_ESCF3 (B7LWN3), FIXB_RHIME (P09819), FIXB_SALA4 (B5F757), FIXB_SALPA (Q5PIP0), FIXB_SALPK (B5BL14), FIXB_SALTI (P64096), FIXB_SALTY (P64095), FIXB_SHIDS (Q32K55), FIXB_SHIFL (P59675), FIXB_SHISS (Q3Z5W6), FIXB_SINFN (Q53209), YDIR_ECOLI (P77378) » more Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format] Retrieve the sequence logo from the alignment
UniProtKB/Swiss-Prot False negative sequences	3 sequences ETFA_ANAPI (G3KIM6), ETFA_CHRSD (Q1QYV9), YGCQ_ECOLI (Q46907)
UniProtKB/Swiss-Prot 'Partial' sequences	1 sequence ETFA_CLOPA (P81342)
PDB [Detailed view]	13 PDB 1EFP; 1EFV; 1O94; 1O95; 1O96; 1O97; 1T9G; 2A1T; 2A1U; 3CLR; 3CLS; 3CLT; 3CLU » more