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Entry: PS00756

General information about the entry

Entry name [info] SECY_2
Accession [info] PS00756
Entry type [info] PATTERN
Date [info] 01-DEC-1992 CREATED;
01-DEC-2001 DATA UPDATE;
22-FEB-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00612

Name and characterization of the entry

Description [info] Protein secY signature 2.
Pattern [info] 
[LIVMFYW](2)-x-[DE]-x-[LIVM]-[STDNQ]-x(2,3)-[GK]-[LIVMF]-[GST]-[NST]-G-
x-[GST]-[LIV]-[LIVFP].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_01 which contains 569'213 sequence entries.


Total number of hits 120 in 120 different sequences
Number of true positive hits 120 in 120 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 9
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 93.02 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 120 sequences 

S61A1_BOVIN (Q5EA68    ), S61A1_CANLF (P38377    ), S61A1_DANRE (Q90ZM2    ), 

S61A1_HUMAN (P61619    ), S61A1_MOUSE (P61620    ), S61A1_ONCMY (Q98SN9    ), 
S61A1_PONAB (Q5R5L5    ), S61A1_RAT   (P61621    ), S61A2_BOVIN (Q2KHX4    ), 
S61A2_DANRE (Q90YL4    ), S61A2_HUMAN (Q9H9S3    ), S61A2_MOUSE (Q9JLR1    ), 
S61A2_ONCMY (Q98SN8    ), S61A2_PONAB (Q5NVM7    ), SC61A_BORSA (Q8AY33    ), 
SC61A_BOVVA (Q8AY31    ), SC61A_CANAL (Q9P8E3    ), SC61A_CANGB (Q6FRY3    ), 
SC61A_DEBHA (Q6BN08    ), SC61A_DICDI (Q54XK2    ), SC61A_DISMA (Q7T277    ), 
SC61A_GADOC (Q8AY32    ), SC61A_HALRO (Q25147    ), SC61A_HARAN (Q7T278    ), 
SC61A_HEMAM (Q8AY34    ), SC61A_KLULC (Q6CPY9    ), SC61A_NEUCR (Q870W0    ), 
SC61A_NOTAN (Q8AY35    ), SC61A_PAGBO (Q8AY36    ), SC61A_SCHPO (P79088    ), 
SC61A_WICAO (Q96TW8    ), SC61A_YARLI (P78979    ), SC61A_YEAST (P32915    ), 
SCY1_ARATH  (Q38885    ), SECY1_LACKZ (F6CD01    ), SECY2_LACKZ (F6CFW7    ), 
SECY_ANTSP  (Q37143    ), SECY_AQUAE  (O66491    ), SECY_ARCFU  (O28377    ), 
SECY_BACLD  (Q05207    ), SECY_BACSU  (P16336    ), SECY_BORBU  (O51451    ), 
SECY_BUCAI  (P57571    ), SECY_BUCAK  (P49976    ), SECY_BUCAP  (Q8K969    ), 
SECY_BUCBP  (Q89A85    ), SECY_CHLMU  (Q9PJN1    ), SECY_CHLPN  (Q9Z7S5    ), 
SECY_CHLTR  (P28539    ), SECY_CORGL  (P38376    ), SECY_CYACA  (P46249    ), 
SECY_CYAM1  (Q85FU6    ), SECY_CYAPA  (P25014    ), SECY_DIALT  (P28540    ), 
SECY_ECO57  (P0AGA4    ), SECY_ECOL6  (P0AGA3    ), SECY_ECOLI  (P0AGA2    ), 
SECY_GUITH  (P28527    ), SECY_HAEIN  (P43804    ), SECY_HALH5  (P38375    ), 
SECY_HALMA  (P28542    ), SECY_HALSA  (Q9HPB1    ), SECY_HALVD  (Q977V3    ), 
SECY_HELPJ  (Q9ZJS9    ), SECY_HELPY  (O25879    ), SECY_LACLA  (P58118    ), 
SECY_LACLC  (P27148    ), SECY_MAIZE  (O63066    ), SECY_METJA  (Q60175    ), 
SECY_METTH  (O26134    ), SECY_METVA  (P28541    ), SECY_MICLU  (P33108    ), 
SECY_MYCBO  (P0A5Z3    ), SECY_MYCCT  (P10250    ), SECY_MYCGA  (O52351    ), 
SECY_MYCGE  (P47416    ), SECY_MYCLE  (O33006    ), SECY_MYCPN  (Q59548    ), 
SECY_MYCTO  (P9WGN2    ), SECY_MYCTU  (P9WGN3    ), SECY_NEOYE  (Q1XDJ1    ), 
SECY_ORYSJ  (Q6ZG25    ), SECY_PEA    (Q9XQU4    ), SECY_PORPU  (P51297    ), 
SECY_PYRAB  (Q9V1V8    ), SECY_PYRFU  (Q8U019    ), SECY_PYRHO  (O59442    ), 
SECY_PYRSA  (P38397    ), SECY_RICBR  (Q1RHP1    ), SECY_RICCN  (Q92GY6    ), 
SECY_RICFE  (Q4UMQ9    ), SECY_RICPR  (Q9ZCS5    ), SECY_RICTY  (Q68W98    ), 
SECY_SACS2  (Q9UX84    ), SECY_SHIFL  (P0AGA5    ), SECY_SPIOL  (P93690    ), 
SECY_STAA8  (O08387    ), SECY_STAAC  (Q5HDX8    ), SECY_STAAM  (Q99S39    ), 
SECY_STAAN  (Q7A468    ), SECY_STAAR  (Q6GEK3    ), SECY_STAAS  (Q6G791    ), 
SECY_STAAW  (Q7A086    ), SECY_STACT  (Q05217    ), SECY_STAEQ  (Q5HM19    ), 
SECY_STAES  (Q8CNF3    ), SECY_STRCO  (P46785    ), SECY_STRGB  (Q59912    ), 
SECY_STRGR  (Q59916    ), SECY_STRLI  (P49977    ), SECY_STRSC  (P43416    ), 
SECY_SULAC  (P49978    ), SECY_SYNE7  (P0A4H0    ), SECY_SYNP6  (P0A4H1    ), 
SECY_SYNY3  (P77964    ), SECY_THEMA  (Q9X1I9    ), SECY_THET8  (Q5SHQ8    ), 
SECY_TRICV  (P49461    ), SECY_VAULI  (B7T1W7    ), SECY_VIBCH  (P78283    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 9 sequences 

SC61A_ASHGO (Q752H7    ), SC61A_PYRSA (P38379    ), SECY_AERPE  (Q9YDD0    ), 

SECY_EMIHU  (Q4G351    ), SECY_HETA2  (B2XTD8    ), SECY_PSEAE  (Q9HWF5    ), 
SECY_STRGC  (A8AZK5    ), SECY_STRSV  (A3CK84    ), SSH1_YEAST  (P38353    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 2 sequences 

SECY_GEOSE  (P28620    ), SECY_PARDE  (P72179    )


				
	

	

		PDB
[Detailed view]		
		
			54 PDB
			


			1RH5; 1RHZ; 2AKH; 2AKI; 2WWB; 2YXQ; 2YXR; 2ZJS; 2ZQP; 3BO0; 3BO1; 3DIN; 
			
				3DKN; 3DL8; 3J45; 3J46; 3JC2; 3MP7; 4CG5; 4CG6; 4CG7; 4V4N; 4V6M; 4V7I; 
				5A6U; 5ABB; 5AWW; 5CH4; 5GAE; 5MG3; 5NCO; 6FTG; 6FTI; 6FTJ; 6N3Q; 6ND1; 
				6R7L; 6R7Q; 6W6L; 6Z3T; 7AFT; 7KAH; 7KAI; 7KAJ; 7KAO; 7KAP; 7KAQ; 7KAR; 
				7KAS; 7KAT; 7KAU; 7KB5; 7TM3; 7TUT
			
			

			» more

				
	





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