PROSITE entry PS00756
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General information about the entry
Entry name [info] | SECY_2 |
Accession [info] | PS00756 |
Entry type [info] | PATTERN |
Date [info] |
01-DEC-1992 CREATED;
01-DEC-2001 DATA UPDATE; 08-NOV-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00612 |
Name and characterization of the entry
Description [info] | Protein secY signature 2. |
Pattern [info] |
[LIVMFYW](2)-x-[DE]-x-[LIVM]-[STDNQ]-x(2,3)-[GK]-[LIVMF]-[GST]-[NST]-G- x-[GST]-[LIV]-[LIVFP]. |
Numerical results [info]
Total number of hits | 120 in 120 different sequences |
Number of true positive hits | 120 in 120 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 9 |
Number of 'partial' sequences | 2 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 93.02 % |
Comments [info]
Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
120 sequences
S61A1_BOVIN (Q5EA68), S61A1_CANLF (P38377), S61A1_DANRE (Q90ZM2), S61A1_HUMAN (P61619), S61A1_MOUSE (P61620), S61A1_ONCMY (Q98SN9), S61A1_PONAB (Q5R5L5), S61A1_RAT (P61621), S61A2_BOVIN (Q2KHX4), S61A2_DANRE (Q90YL4), S61A2_HUMAN (Q9H9S3), S61A2_MOUSE (Q9JLR1), S61A2_ONCMY (Q98SN8), S61A2_PONAB (Q5NVM7), SC61A_BORSA (Q8AY33), SC61A_BOVVA (Q8AY31), SC61A_CANAL (Q9P8E3), SC61A_CANGA (Q6FRY3), SC61A_DEBHA (Q6BN08), SC61A_DICDI (Q54XK2), SC61A_DISMA (Q7T277), SC61A_GADOC (Q8AY32), SC61A_HALRO (Q25147), SC61A_HARAN (Q7T278), SC61A_HEMAM (Q8AY34), SC61A_KLULA (Q6CPY9), SC61A_NEUCR (Q870W0), SC61A_NOTAN (Q8AY35), SC61A_PAGBO (Q8AY36), SC61A_SCHPO (P79088), SC61A_WICAO (Q96TW8), SC61A_YARLI (P78979), SC61A_YEAST (P32915), SCY1_ARATH (Q38885), SECY1_LACKZ (F6CD01), SECY2_LACKZ (F6CFW7), SECY_ANTSP (Q37143), SECY_AQUAE (O66491), SECY_ARCFU (O28377), SECY_BACLD (Q05207), SECY_BACSU (P16336), SECY_BORBU (O51451), SECY_BUCAI (P57571), SECY_BUCAK (P49976), SECY_BUCAP (Q8K969), SECY_BUCBP (Q89A85), SECY_CHLMU (Q9PJN1), SECY_CHLPN (Q9Z7S5), SECY_CHLTR (P28539), SECY_CORGL (P38376), SECY_CYACA (P46249), SECY_CYAM1 (Q85FU6), SECY_CYAPA (P25014), SECY_DIALT (P28540), SECY_ECO57 (P0AGA4), SECY_ECOL6 (P0AGA3), SECY_ECOLI (P0AGA2), SECY_GUITH (P28527), SECY_HAEIN (P43804), SECY_HALH5 (P38375), SECY_HALMA (P28542), SECY_HALSA (Q9HPB1), SECY_HALVD (Q977V3), SECY_HELPJ (Q9ZJS9), SECY_HELPY (O25879), SECY_LACLA (P58118), SECY_LACLC (P27148), SECY_MAIZE (O63066), SECY_METJA (Q60175), SECY_METTH (O26134), SECY_METVA (P28541), SECY_MICLU (P33108), SECY_MYCBO (P0A5Z3), SECY_MYCCT (P10250), SECY_MYCGA (O52351), SECY_MYCGE (P47416), SECY_MYCLE (O33006), SECY_MYCPN (Q59548), SECY_MYCTO (P9WGN2), SECY_MYCTU (P9WGN3), SECY_NEOYE (Q1XDJ1), SECY_ORYSJ (Q6ZG25), SECY_PEA(Q9XQU4), SECY_PORPU (P51297), SECY_PYRAB (Q9V1V8), SECY_PYRFU (Q8U019), SECY_PYRHO (O59442), SECY_PYRSA (P38397), SECY_RICBR (Q1RHP1), SECY_RICCN (Q92GY6), SECY_RICFE (Q4UMQ9), SECY_RICPR (Q9ZCS5), SECY_RICTY (Q68W98), SECY_SACS2 (Q9UX84), SECY_SHIFL (P0AGA5), SECY_SPIOL (P93690), SECY_STAA8 (O08387), SECY_STAAC (Q5HDX8), SECY_STAAM (Q99S39), SECY_STAAN (Q7A468), SECY_STAAR (Q6GEK3), SECY_STAAS (Q6G791), SECY_STAAW (Q7A086), SECY_STACT (Q05217), SECY_STAEQ (Q5HM19), SECY_STAES (Q8CNF3), SECY_STRCO (P46785), SECY_STRGB (Q59912), SECY_STRGR (Q59916), SECY_STRLI (P49977), SECY_STRSC (P43416), SECY_SULAC (P49978), SECY_SYNE7 (P0A4H0), SECY_SYNP6 (P0A4H1), SECY_SYNY3 (P77964), SECY_THEMA (Q9X1I9), SECY_THET8 (Q5SHQ8), SECY_TRICV (P49461), SECY_VAULI (B7T1W7), SECY_VIBCH (P78283)» more
|
UniProtKB/Swiss-Prot False negative sequences |
9 sequences
SC61A_EREGS (Q752H7), SC61A_PYRSA (P38379), SECY_AERPE (Q9YDD0), SECY_EMIHU (Q4G351), SECY_HETA2 (B2XTD8), SECY_PSEAE (Q9HWF5), SECY_STRGC (A8AZK5), SECY_STRSV (A3CK84), SSH1_YEAST (P38353)» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
2 sequences
SECY_GEOSE (P28620), SECY_PARDE (P72179) |
PDB [Detailed view] |
65 PDB
1RH5; 1RHZ; 2AKH; 2AKI; 2WWB; 2YXQ; 2YXR; 2ZJS; 2ZQP; 3BO0; 3BO1; 3DIN; 3DKN; 3DL8; 3J45; 3J46; 3JC2; 3MP7; 4CG5; 4CG6; 4CG7; 4V4N; 4V6M; 4V7I; 5A6U; 5ABB; 5AWW; 5CH4; 5GAE; 5MG3; 5NCO; 6FTG; 6FTI; 6FTJ; 6N3Q; 6ND1; 6R7L; 6R7Q; 6W6L; 6Z3T; 7AFT; 7KAH; 7KAI; 7KAJ; 7KAO; 7KAP; 7KAQ; 7KAR; 7KAS; 7KAT; 7KAU; 7KB5; 7TM3; 7TUT; 8B6L; 8BTK; 8DNV; 8DNW; 8DNX; 8DNY; 8DNZ; 8DO0; 8DO1; 8DO2; 8DO3 » more |