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PROSITE entry PS00762


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General information about the entry

Entry name [info] WHEP_TRS_1
Accession [info] PS00762
Entry type [info] PATTERN
Date [info] 01-DEC-1992 CREATED;
01-APR-2006 DATA UPDATE;
13-SEP-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00614

Name and characterization of the entry

Description [info] WHEP-TRS domain signature.
Pattern [info] 
[QYR]-[GH]-[DNEAR]-x-[LIV]-[KR]-x(2)-K-x(2)-[KRNG]-[AS]-x(4)-[LIV]-
[DENKA]-x(2)-[IV]-x(2)-L-x(3)-K.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_04 which contains 570'157 sequence entries.


Total number of hits 38 in 29 different sequences
Number of true positive hits 38 in 29 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 2
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 95.00 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 6
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 29 sequences 

GARS_BOMMO  (Q04451), GARS_CAEEL  (Q10039), GARS_DROME  (Q9VUK8), 

GARS_HUMAN  (P41250), GARS_MOUSE  (Q9CZD3), GARS_PONAB  (Q5RBL1), 
GARS_RAT(Q5I0G4), HARS1_BOVIN (Q2KI84), HARS1_DANRE (E9QI36), 
HARS1_HUMAN (P12081), HARS1_MESAU (P07178), HARS1_MOUSE (Q61035), 
HARS1_PONAB (Q5R4R2), SYEP_CRIGR  (Q7SIA2), SYEP_DROME  (P28668), 
SYEP_HUMAN  (P07814), SYEP_MOUSE  (Q8CGC7), SYGM1_ARATH (O23627), 
SYH_SCHPO   (O43011), SYMC_BOVIN  (Q2T9L8), SYMC_HUMAN  (P56192), 
SYMC_MOUSE  (Q68FL6), SYMC_XENLA  (Q6PF21), SYWC_BOVIN  (P17248), 
SYWC_HUMAN  (P23381), SYWC_MOUSE  (P32921), SYWC_PONAB  (Q5R4J1), 
SYWC_RABIT  (P23612), SYWC_RAT(Q6P7B0)
» more

UniProtKB/Swiss-Prot
False negative sequences		 2 sequences 

SYNC1_ARATH (Q9SW96), SYNC3_ARATH (Q9SSK1)


				
	

	

		PDB
[Detailed view]		
		
			26 PDB
			


			1FYJ; 1R6T; 1X59; 2AZX; 2DJV; 2LW7; 2PME; 2PMF; 2Q5H; 2Q5I; 2QUH; 2QUI; 
			
				2QUJ; 2QUK; 2ZT5; 2ZT6; 2ZT7; 2ZT8; 2ZXF; 4G85; 4KQE; 4PHC; 4X5O; 5E6M; 
				5UJJ; 6O76
			
			

			» more