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Entry: PS00762

General information about the entry

Entry name [info] WHEP_TRS_1
Accession [info] PS00762
Entry type [info] PATTERN
Date [info] 01-DEC-1992 CREATED;
01-APR-2006 DATA UPDATE;
11-DEC-2019 INFO UPDATE.
PROSITE Doc. [info] PDOC00614

Name and characterization of the entry

Description [info] WHEP-TRS domain signature.
Pattern [info] 
[QYR]-[GH]-[DNEAR]-x-[LIV]-[KR]-x(2)-K-x(2)-[KRNG]-[AS]-x(4)-[LIV]-
[DENKA]-x(2)-[IV]-x(2)-L-x(3)-K.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2019_11 which contains 561'568 sequence entries.


Total number of hits 35 in 26 different sequences
Number of true positive hits 35 in 26 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 2
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 94.59 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 6
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 26 sequences 

GARS_CAEEL  (Q10039    ), GARS_HUMAN  (P41250    ), GARS_MOUSE  (Q9CZD3    ), 

GARS_PONAB  (Q5RBL1    ), SYEP_CRIGR  (Q7SIA2    ), SYEP_DROME  (P28668    ), 
SYEP_HUMAN  (P07814    ), SYEP_MOUSE  (Q8CGC7    ), SYGM1_ARATH (O23627    ), 
SYG_BOMMO   (Q04451    ), SYHC_BOVIN  (Q2KI84    ), SYHC_HUMAN  (P12081    ), 
SYHC_MESAU  (P07178    ), SYHC_MOUSE  (Q61035    ), SYHC_PONAB  (Q5R4R2    ), 
SYH_SCHPO   (O43011    ), SYMC_BOVIN  (Q2T9L8    ), SYMC_HUMAN  (P56192    ), 
SYMC_MOUSE  (Q68FL6    ), SYMC_XENLA  (Q6PF21    ), SYWC_BOVIN  (P17248    ), 
SYWC_HUMAN  (P23381    ), SYWC_MOUSE  (P32921    ), SYWC_PONAB  (Q5R4J1    ), 
SYWC_RABIT  (P23612    ), SYWC_RAT    (Q6P7B0    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 2 sequences 

SYNC1_ARATH (Q9SW96    ), SYNC3_ARATH (Q9SSK1    )


				
	

	

		UniProtKB/Swiss-Prot
'Partial' sequences		
		
			1 sequence
			


			
GARS_RAT    (Q5I0G4    )


				
	

	

		PDB
[Detailed view]		
		
			7 PDB
			


			1FYJ; 1R6T; 1X59; 2DJV; 2LW7; 5UJJ; 6O76
				
	





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