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Entry: PS00777

General information about the entry

Entry name [info] GH11_2
Accession [info] PS00777
Entry type [info] PATTERN
Date [info] 01-DEC-1992 CREATED;
01-NOV-1995 DATA UPDATE;
18-SEP-2019 INFO UPDATE.
PROSITE Doc. [info] PDOC00622
Associated ProRule [info] PRU10063

Name and characterization of the entry

Description [info] Glycosyl hydrolases family 11 (GH11) active site signature 2.
Pattern [info] 
[LIVMF]-x(2)-E-[AG]-[YWG]-[QRFGS]-[SG]-[STAN]-G-x-[SAF].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2019_08 which contains 560'823 sequence entries.


Total number of hits 70 in 69 different sequences
Number of true positive hits 65 in 64 different sequences
Number of 'unknown' hits 0
Number of false positive hits 5 in 5 different sequences
Number of false negative sequences 9
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 92.86 %
Recall (true positives / (true positives + false negatives)) 87.84 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 2
Site [info] active_site at position 3
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 64 sequences 

XY11A_BOTFU (Q2LMP0    ), XY11A_PSEXY (P83513    ), XYN11_PAEBA (V9TXH2    ), 

XYN1_COCCA  (Q06562    ), XYN1_HUMIN  (P55334    ), XYN1_HYPJQ  (G0R947    ), 
XYN1_HYPJR  (P36218    ), XYN1_LEUGO  (A6YAP7    ), XYN1_MAGGR  (P0CT48    ), 
XYN1_MAGO7  (P0CT49    ), XYN2_HUMGT  (Q9HGE1    ), XYN2_HYPJQ  (G0RUP7    ), 
XYN2_HYPJR  (P36217    ), XYN2_RHIOR  (W0HJ53    ), XYN2_TRIHA  (B5A7N4    ), 
XYN3_ASPKW  (P33557    ), XYN4_MAGGR  (Q92245    ), XYN4_MAGO7  (G4NA54    ), 
XYN6_ASPNG  (Q6QJ75    ), XYNA1_CLOSR (Q8GJ44    ), XYNA2_CLOSR (P33558    ), 
XYNA_ASPAW  (P55328    ), XYNA_ASPCL  (A1CCU0    ), XYNA_ASPFC  (B0XXF3    ), 
XYNA_ASPFN  (B8NKE9    ), XYNA_ASPFU  (Q4WG11    ), XYNA_ASPNG  (P55329    ), 
XYNA_ASPOR  (Q9HFA4    ), XYNA_ASPTN  (Q0CFS3    ), XYNA_ASPTU  (P55331    ), 
XYNA_BACCI  (P09850    ), XYNA_BACPU  (P00694    ), XYNA_BACSU  (P18429    ), 
XYNA_BYSSP  (P81536    ), XYNA_CLOSA  (P17137    ), XYNA_EMENI  (P55332    ), 
XYNA_GEOSE  (P45705    ), XYNA_GIBZE  (I1S2K3    ), XYNA_NEOFI  (A1DJ52    ), 
XYNA_NEOPA  (P29127    ), XYNA_RUMFL  (P29126    ), XYNA_SCHCO  (P35809    ), 
XYNA_THELA  (O43097    ), XYNB_ASPFC  (B0Y8Q8    ), XYNB_ASPFU  (Q4WLV2    ), 
XYNB_ASPKW  (P48824    ), XYNB_ASPNC  (A2Q7I0    ), XYNB_ASPNG  (P55330    ), 
XYNB_EMENI  (P55333    ), XYNB_GIBZE  (I1RII8    ), XYNB_NEOFI  (A1DNU5    ), 
XYNB_PENOX  (E7EF85    ), XYNB_PHACH  (B7SIW1    ), XYNB_STRLI  (P26515    ), 
XYNB_STRSQ  (D7EZJ3    ), XYNB_TALPU  (Q96W72    ), XYNC_FIBSS  (P35811    ), 
XYNC_STRCO  (Q9RI72    ), XYNC_STRLI  (P26220    ), XYND_CELFI  (P54865    ), 
XYND_RUMFL  (Q53317    ), XYNG_VERDA  (Q0ZHI9    ), XYN_PHACE   (O97402    ), 
XYN_TRIHA   (P48793    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 9 sequences 

XY11A_CELJA (Q59674    ), XY11B_CELJA (Q8VP72    ), XYN4_ASPNG  (Q12550    ), 

XYN5_ASPNC  (A2R4D1    ), XYN5_ASPNG  (Q12549    ), XYNA_PIRSP  (Q12667    ), 
XYNB_ASPCL  (A1CU59    ), XYNB_ASPFN  (B8NJ86    ), XYNB_ASPOR  (P87037    )
» more

UniProtKB/Swiss-Prot
False positive sequences		 5 sequences 

CHI1_RHINI  (P29025    ), IF2_SYNY3   (P72689    ), PKHH3_HUMAN (Q7Z736    ), 

RPOA_RUBXD  (Q1AU56    ), TETR1_ECOLX (P03038    )
» more

PDB
[Detailed view]		 64 PDB

1AXK; 1BK1; 1BVV; 1C5H; 1C5I; 1ENX; 1HV0; 1HV1; 1PVX; 1RED; 1REE; 1REF; 1T6G; 1UKR; 1XNB; 1XNC; 1XND; 1XXN; 1XYN; 1XYO; 1XYP; 1YNA; 2B42; 2B45; 2B46; 2BVV; 2C1F; 2DCY; 2DCZ; 2DFB; 2DFC; 2VG9; 3EXU; 3HD8; 3LB9; 3LGR; 3RI8; 3RI9; 3VZK; 3VZL; 3VZN; 3VZO; 4HK9; 4HKL; 4HKW; 4S2D; 4S2F; 4S2G; 4S2H; 4XPV; 4XQ4; 4XQD; 4XQW; 5EJ3; 5K7P; 5K9Y; 5ZF3; 5ZH0; 5ZH9; 5ZII; 5ZIW; 5ZKZ; 5ZO0; 6QE8
» more

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