PROSITE logo

PROSITE entry PS00830


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry

Entry name [info] GREAB_2
Accession [info] PS00830
Entry type [info] PATTERN
Date [info] 01-OCT-1993 CREATED;
01-DEC-2001 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00651

Name and characterization of the entry

Description [info] Prokaryotic transcription elongation factors signature 2.
Pattern [info]
S-x(2)-S-[PK]-[LIVMF]-[AG]-x-[SAGNE]-[LIVM]-[LIVY]-x(4)-[DNG]-[DE].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_03 which contains 571'609 sequence entries.


Total number of hits 275 in 275 different sequences
Number of true positive hits 274 in 274 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 89
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 99.64 %
Recall (true positives / (true positives + false negatives)) 75.48 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
274 sequences

GFH1_THEAQ  (Q8VQD7), GFH1_THET2  (Q72JT8), GFH1_THET8  (Q5SJG6), 
GREA2_LACPL (Q88WQ9), GREA_ACET2  (A3DJG6), GREA_ACIBS  (B0VSL8), 
GREA_ACICJ  (A5FWZ7), GREA_AGRFC  (Q8UDE5), GREA_ALKEH  (Q0A765), 
GREA_ALKOO  (A8MLU4), GREA_ALLAM  (B9JYZ7), GREA_AMOA5  (B3ESB4), 
GREA_ANASK  (B4UCU9), GREA_BACAA  (C3P968), GREA_BACAC  (C3L5Y5), 
GREA_BACAN  (Q81LK9), GREA_BACC1  (Q730F5), GREA_BACC7  (B7HQD7), 
GREA_BACCN  (A7GT58), GREA_BACCQ  (B9IYE4), GREA_BACCR  (Q817Z6), 
GREA_BACCZ  (Q634G5), GREA_BACHK  (Q6HDE6), GREA_BACLD  (Q65GT4), 
GREA_BACP2  (A8FFL6), GREA_BACSU  (P80240), GREA_BACVZ  (A7Z726), 
GREA_BARBK  (A1UTG0), GREA_BARHE  (Q6G2M7), GREA_BARQU  (Q6FZ57), 
GREA_BART1  (A9IRC3), GREA_BAUCH  (Q1LSK1), GREA_BLOPB  (Q493U4), 
GREA_BORBU  (O51157), GREA_BRUA1  (B2S6W5), GREA_BRUA2  (Q2YRN8), 
GREA_BRUA4  (A6WZH2), GREA_BRUAB  (Q57C09), GREA_BRUC2  (A9M6H1), 
GREA_BRUMB  (C0REE0), GREA_BRUME  (P64271), GREA_BRUSI  (B0CHU1), 
GREA_BRUSU  (P64272), GREA_BUCA5  (B8D9G7), GREA_BUCAI  (P57464), 
GREA_BUCAT  (B8D7R9), GREA_CALS4  (Q8R7N0), GREA_CAMJ8  (A8FK75), 
GREA_CAMJD  (A7H585), GREA_CAMJE  (Q9PIK9), GREA_CAMJJ  (A1VY10), 
GREA_CAMJR  (Q5HWI0), GREA_CAMLR  (B9KDP9), GREA_CHESB  (Q11GG5), 
GREA_CHLL2  (B3EE12), GREA_CHLMU  (Q9PLU1), GREA_CHLP8  (B3QPT8), 
GREA_CHLPB  (B3EPH3), GREA_CHLPD  (A1BHJ3), GREA_CHLPM  (A4SFN0), 
GREA_CHLPN  (Q9Z7G4), GREA_CHLT3  (B3QV56), GREA_CHLTE  (Q8KCH5), 
GREA_CHLTR  (O84641), GREA_CHRFK  (A0M5U7), GREA_CLOAB  (Q97EB6), 
GREA_CLOB1  (A7FZA6), GREA_CLOB6  (C3KVU0), GREA_CLOB8  (A6LPL4), 
GREA_CLOBA  (B2UXU9), GREA_CLOBB  (B2TI25), GREA_CLOBH  (A5I7P5), 
GREA_CLOBJ  (C1FNC6), GREA_CLOBK  (B1IGJ3), GREA_CLOBL  (A7GJB4), 
GREA_CLOBM  (B1KTC2), GREA_CLOK1  (B9DY72), GREA_CLOK5  (A5N4L0), 
GREA_CLONN  (A0PXN3), GREA_DESDA  (B8IZM4), GREA_DESPS  (Q6AL57), 
GREA_ECO57  (P0A6W7), GREA_ECOL6  (P0A6W6), GREA_ECOLI  (P0A6W5), 
GREA_FLAJ1  (A5FJJ8), GREA_FLAPJ  (A6H247), GREA_GEOKA  (Q5KWV4), 
GREA_GEOTN  (A4IR71), GREA_HAEDU  (Q7VL00), GREA_HAEIN  (P43881), 
GREA_HALH5  (Q9KDD7), GREA_HALHL  (A1WXX6), GREA_HELAH  (Q17WJ3), 
GREA_HELP2  (B6JM90), GREA_HELPG  (B5Z7M6), GREA_HELPH  (Q1CT06), 
GREA_HELPJ  (P64276), GREA_HELPS  (B2USW4), GREA_HELPY  (P64275), 
GREA_HYDCU  (Q31H97), GREA_HYPNA  (Q0C4H1), GREA_LACP7  (A9KIP3), 
GREA_LEGPA  (Q5X1R6), GREA_LEGPC  (A5IAV2), GREA_LEGPH  (Q5ZS95), 
GREA_LEGPL  (Q5WTH5), GREA_LEUMM  (Q03YY4), GREA_LIMF3  (B2GD90), 
GREA_LISIN  (P64278), GREA_LISMC  (C1KVE3), GREA_LISMF  (Q71ZH4), 
GREA_LISMH  (B8DE15), GREA_LISMO  (P64277), GREA_LISW6  (A0AIU5), 
GREA_MACCJ  (B9E6Y8), GREA_MAGMM  (A0LC15), GREA_MARMM  (Q0AMQ6), 
GREA_MARSD  (C6BRV2), GREA_MESFL  (Q6F215), GREA_MESH2  (Q5ZZL8), 
GREA_MESH7  (Q4A759), GREA_MESHJ  (Q4A921), GREA_META1  (B3PM73), 
GREA_METCA  (Q607B0), GREA_METNO  (B8IBN8), GREA_METS4  (B0U8M0), 
GREA_MYCA9  (B1MKJ7), GREA_MYCBO  (P64280), GREA_MYCBP  (A1KHL8), 
GREA_MYCBT  (C1AM72), GREA_MYCCT  (Q2SSM5), GREA_MYCGE  (P47524), 
GREA_MYCLB  (B8ZT53), GREA_MYCLE  (P46808), GREA_MYCPN  (P78019), 
GREA_MYCPU  (Q98Q16), GREA_MYCS2  (A0R2X1), GREA_MYCTA  (A5U1C6), 
GREA_MYCTO  (P9WMT8), GREA_MYCTU  (P9WMT9), GREA_MYCVP  (A1TE43), 
GREA_NAUPA  (B9L822), GREA_NITOC  (Q3J822), GREA_NITV2  (Q725M4), 
GREA_NITV4  (A1V9Q2), GREA_NITV9  (B8DJL8), GREA_NOVAD  (Q2G656), 
GREA_OCEIH  (Q8EPT6), GREA_OENOB  (Q04EK0), GREA_ORITB  (A5CE64), 
GREA_ORITI  (B3CTQ6), GREA_PASMU  (P57801), GREA_PELPB  (B4SBF9), 
GREA_PELPD  (A1AS07), GREA_PETMO  (A9BFC0), GREA_PHEZH  (B4RH54), 
GREA_PROA2  (B4S9B2), GREA_PSEAE  (Q9HV46), GREA_PSESM  (Q87WP5), 
GREA_PSYA2  (Q4FTJ2), GREA_PSYCK  (Q1QCJ2), GREA_PSYIN  (A1ST36), 
GREA_PSYWF  (A5WDP3), GREA_RALN1  (Q8XZ82), GREA_RHIE6  (B3PUK3), 
GREA_RHIEC  (Q2K600), GREA_RHIJ3  (Q1MDR7), GREA_RHILO  (Q98I49), 
GREA_RHILV  (O68546), GREA_RHILW  (B5ZXG2), GREA_RHIME  (P56894), 
GREA_RHIR8  (B9J753), GREA_RHIWR  (A5V3E1), GREA_RHOE4  (C1A2Y4), 
GREA_RHORT  (Q2RQB1), GREA_RICB8  (A8GUN3), GREA_RICBR  (Q1RKI0), 
GREA_RICCK  (A8F083), GREA_RICCN  (Q92FZ5), GREA_RICFE  (Q4UJS8), 
GREA_RICPR  (P27640), GREA_RICTY  (Q68VQ2), GREA_SACEN  (A4F866), 
GREA_SALTI  (P64282), GREA_SALTY  (P64281), GREA_SHIFL  (P0A6W8), 
GREA_SHOC1  (Q5WHM1), GREA_SINMW  (A6U8X4), GREA_SOLM1  (C4XLU8), 
GREA_SPHAL  (Q1GUG9), GREA_STAA1  (A7X319), GREA_STAA2  (A6U279), 
GREA_STAA3  (Q2FGB6), GREA_STAA8  (Q2FXW7), GREA_STAA9  (A5ITD5), 
GREA_STAAB  (Q2YT68), GREA_STAAC  (Q5HFF2), GREA_STAAE  (A6QHF1), 
GREA_STAAM  (P64283), GREA_STAAN  (P99156), GREA_STAAR  (Q6GG93), 
GREA_STAAS  (Q6G8V9), GREA_STAAT  (A8Z4E8), GREA_STAAW  (P64284), 
GREA_STACT  (B9DNJ3), GREA_STAEQ  (Q5HNU0), GREA_STAES  (Q8CSB3), 
GREA_STAS1  (Q49Y48), GREA_STRA1  (Q3JZS3), GREA_STRA3  (Q8E3U5), 
GREA_STRA5  (Q8DY80), GREA_STRCO  (Q9ADK2), GREA_STRGC  (A8AVM5), 
GREA_STRMU  (Q8DSP7), GREA_STRP1  (P64285), GREA_STRP2  (Q04HS9), 
GREA_STRP3  (P0DB46), GREA_STRP4  (B5E681), GREA_STRP6  (Q5XDQ7), 
GREA_STRP7  (C1C8A8), GREA_STRP8  (P64287), GREA_STRPG  (A2RGA4), 
GREA_STRPJ  (B8ZLB8), GREA_STRPN  (Q97PT2), GREA_STRPQ  (P0DB47), 
GREA_STRR6  (Q8DP42), GREA_STRS2  (A4W3E8), GREA_STRSV  (A3CPS3), 
GREA_STRSY  (A4VX43), GREA_STRT1  (Q5M1J6), GREA_STRT2  (Q5M638), 
GREA_STRTD  (Q03MH4), GREA_STRU0  (B9DTR1), GREA_STRZJ  (C1CFA2), 
GREA_STRZP  (C1CLL5), GREA_STRZT  (C1CSD7), GREA_SYNAS  (Q2LR03), 
GREA_SYNC1  (Q3A452), GREA_SYNFM  (A0LK20), GREA_THEMA  (Q9X232), 
GREA_THENN  (B9K7Y7), GREA_THEP1  (A5ILE7), GREA_THEP3  (B0KCE3), 
GREA_THEPX  (B0K5B9), GREA_THERP  (B9L0L0), GREA_THESQ  (B1LAX5), 
GREA_THEYD  (B5YJG9), GREA_THISH  (B8GNX7), GREA_TREPA  (O83063), 
GREA_TREPS  (B2S1W7), GREA_TRIL1  (B3E3H5), GREA_VIBCH  (Q9KU89), 
GREA_VIBPA  (Q87LZ2), GREA_VIBVU  (Q8DBW9), GREA_YERPE  (Q8ZBB3), 
GREA_YERPG  (A9R594), GREA_ZYMMO  (O50237), GREB_ECO57  (P64274), 
GREB_ECOL6  (P64273), GREB_ECOLI  (P30128), GREB_HAEDU  (Q7VM42), 
GREB_HAEIN  (P43882), GREB_PASMU  (P57802), GREB_PSEPK  (Q88KH5), 
GREB_PSESM  (Q883T5), GREB_SALTI  (Q8Z217), GREB_SALTY  (Q8ZLJ2), 
GREB_VIBCH  (Q9KNL7), GREB_VIBPA  (Q87TB8), GREB_VIBVU  (Q8DDU7), 
GREB_VIBVY  (Q7MPX6), GREB_XANAC  (Q8PJ11), GREB_XANCP  (Q8P7P8), 
GREB_YERPE  (Q8ZJH2)
» more

UniProtKB/Swiss-Prot
False negative sequences
89 sequences

GREA1_LACPL (Q88ZS9), GREA_ACHLI  (A9NGN4), GREA_ALIB4  (A8ESG0), 
GREA_AZOC5  (A8HR94), GREA_BEII9  (B2IHJ7), GREA_BRADU  (Q89DR1), 
GREA_BRASB  (A5ER96), GREA_BUCAP  (Q8K9G6), GREA_BUCBP  (P59489), 
GREA_BUCCC  (Q057J4), GREA_CAMHC  (A7I2X0), GREA_CAUSK  (B0SZ84), 
GREA_CAUVC  (Q9A4I3), GREA_CAUVN  (B8H1V7), GREA_CERS1  (A3PGS3), 
GREA_CERS4  (Q3J5L0), GREA_CERS5  (A4WVE8), GREA_CERSK  (B9KLF5), 
GREA_CHLAA  (A9WK05), GREA_CHLAD  (B8G358), GREA_CHLCH  (Q3ATA7), 
GREA_CHLSY  (B9LBX1), GREA_CLOD6  (Q181F4), GREA_CLOP1  (Q0TMI6), 
GREA_CLOPE  (Q8XHL7), GREA_CLOPS  (Q0SQ85), GREA_DEHM1  (Q3Z8E7), 
GREA_FINM2  (B0S216), GREA_FRAP2  (B0TYL2), GREA_FRAT1  (Q14GS9), 
GREA_FRATF  (A7NDI1), GREA_FRATH  (Q2A2C7), GREA_FRATM  (B2SDF5), 
GREA_FRATN  (A0Q5P2), GREA_FRATO  (Q0BKZ4), GREA_FRATT  (Q5NFC6), 
GREA_FRATW  (A4IZ52), GREA_HAMD5  (C4K7K9), GREA_HELHP  (Q7VJT9), 
GREA_JANSC  (Q28V47), GREA_LACLA  (Q9CHT2), GREA_LACLM  (A2RIW3), 
GREA_LACLS  (Q030Z7), GREA_LEUCK  (B1MX52), GREA_MYCAP  (A5IYH4), 
GREA_MYCGA  (Q7NBS1), GREA_MYCMS  (Q6MTU9), GREA_NEIMA  (Q9JTT4), 
GREA_NEIMB  (Q9JYU3), GREA_NEOSM  (Q2GD99), GREA_NITHX  (Q1QJF3), 
GREA_NITSB  (A6Q4L2), GREA_NITWN  (Q3SPT8), GREA_PARDP  (A1AZ46), 
GREA_PELUB  (Q4FPG2), GREA_POLNA  (A1VN58), GREA_PSEPK  (Q88DU7), 
GREA_RHOBA  (Q7UVA0), GREA_RHOP5  (Q07JJ7), GREA_RHOPA  (Q6N2H8), 
GREA_RHOPB  (Q20ZR6), GREA_RHOPT  (B3QJZ1), GREA_ROSCS  (A7NFC5), 
GREA_ROSS1  (A5UPG5), GREA_RUEPO  (Q5LXA4), GREA_RUTMC  (A1AXD2), 
GREA_STAHJ  (Q4L6V7), GREA_STRAW  (Q82I57), GREA_STRPI  (B1ICT9), 
GREA_SULNB  (A6Q9U9), GREA_SYNWW  (Q0B0N4), GREA_THEAB  (B7ID86), 
GREA_THEM4  (A6LMS3), GREA_UREP2  (B1AIU2), GREA_UREPA  (Q9PQI7), 
GREA_UREU1  (B5ZBB2), GREA_VEREI  (A1WH11), GREA_VESOH  (A5CVW9), 
GREA_WIGBR  (Q8D2W9), GREA_WOLSU  (Q7M9N2), GREA_XANAC  (Q8PLD9), 
GREA_XANCP  (Q9L4D3), GREA_XYLF2  (B2I844), GREA_XYLFA  (Q9PEC0), 
GREA_XYLFM  (B0U568), GREA_XYLFT  (Q87EB7), GREB_NEIMA  (Q9JVD0), 
GREB_NEIMB  (Q9K0C5), GREB_PSEAE  (Q9HZY5)
» more

UniProtKB/Swiss-Prot
False positive sequences
1 sequence

PCDH1_HUMAN (Q08174)

		
PDB
[Detailed view]
10 PDB

1GRJ; 2ETN; 2EUL; 2F23; 2P4V; 3AOH; 3AOI; 4WQT; 6RI7; 6RIN