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PROSITE entry PS00862


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General information about the entry

Entry name [info] OX2_COVAL_FAD
Accession [info] PS00862
Entry type [info] PATTERN
Date [info] 01-OCT-1993 CREATED;
01-APR-2006 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00674

Name and characterization of the entry

Description [info] Oxygen oxidoreductases covalent FAD-binding site.
Pattern [info] 
P-x(7)-{L}-x(2)-[DE]-[LIVM]-x(3)-[LIVM]-x(9,12)-[LIVM]-x(3)-[GSA]-
[GSTCHRQ]-G-H.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_04 which contains 571'864 sequence entries.


Total number of hits 38 in 38 different sequences
Number of true positive hits 36 in 36 different sequences
Number of 'unknown' hits 0
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 17
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 94.74 %
Recall (true positives / (true positives + false negatives)) 67.92 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] FAD_binding at position 15
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 36 sequences 

ALO1_CANAL  (O93852), ALO_CANGA   (Q6FS20), ALO_DEBHA   (Q6BZA0), 

ALO_EREGS   (Q752Y3), ALO_KLULA   (Q6CSY3), ALO_NEUCR   (Q7SGY1), 
ALO_YEAST   (P54783), APF9_GIBF5  (S0DL65), BBE18_ARATH (Q9SVG5), 
BBE22_ARATH (Q9SUC6), BBE23_ARATH (Q9FKV2), BBE27_ARATH (Q9FI25), 
CKX1_ARATH  (O22213), CKX1_MAIZE  (Q9T0N8), CKX1_ORYSJ  (Q0JQ12), 
CKX2_ARATH  (Q9FUJ3), CKX3_ARATH  (Q9LTS3), CKX4_ORYSJ  (Q5JLP4), 
CKX5_ARATH  (Q67YU0), CKX5_ORYSJ  (Q5ZAY9), CKX6_ORYSJ  (Q6YW51), 
CKX7_ORYSJ  (Q6YW50), CKX9_ORYSJ  (Q75K78), FAS5_RHOFA  (P46377), 
GGLO_BOVIN  (Q3ZC33), GGLO_MOUSE  (P58710), GGLO_PIG(Q8HXW0), 
GGLO_RAT(P10867), GGLO_SCYTO  (Q90YK3), GOOX_SARSR  (Q6PW77), 
GULDH_MYCTO (P9WIT2), GULDH_MYCTU (P9WIT3), HDNO_PAENI  (P08159), 
MCRA_STRLA  (P43485), RETO_ESCCA  (P30986), RETO_PAPSO  (P93479)
» more

UniProtKB/Swiss-Prot
False negative sequences		 17 sequences 

A2372_ARTBC (D4B1P2), A2478_ARTBC (D4B1Z7), A7056_ARTBC (D4AS41), 

AFOF_EMENI  (Q5BEJ5), ALO_SCHPO   (Q9HDX8), ALO_YARLI   (Q6CG88), 
CKX10_ORYSJ (Q5Z620), CKX11_ORYSJ (Q6Z955), CKX2_ORYSJ  (Q4ADV8), 
CKX3_ORYSJ  (Q8LNV6), CKX4_ARATH  (Q9FUJ2), CKX6_ARATH  (Q9LY71), 
CKX7_ARATH  (Q9FUJ1), CKX8_ORYSI  (A2XVN3), CKX8_ORYSJ  (A3AVP1), 
XYOA_STRCO  (Q9ZBU1), XYOA_STRSI  (Q9KX73)
» more

UniProtKB/Swiss-Prot
False positive sequences		 2 sequences 

ATG2A_HUMAN (Q2TAZ0), DNJ21_ARATH (Q0WT48)


				
	

	

		PDB
[Detailed view]		
		
			29 PDB
			


			1W1O; 1W1Q; 1W1R; 1W1S; 1ZR6; 2AXR; 2BVF; 2BVG; 2BVH; 2QKN; 2QPM; 3BW7; 
			
				3C0P; 3D2D; 3D2H; 3D2J; 3DQ0; 3FW8; 3FW9; 3FWA; 3GSY; 3HSU; 3KJM; 3S1C; 
				3S1D; 3S1E; 3S1F; 4EC3; 4PZF
			
			

			» more