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PROSITE entry PS00874


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General information about the entry

Entry name [info] T2SP_F
Accession [info] PS00874
Entry type [info] PATTERN
Date [info] 01-OCT-1993 CREATED;
01-DEC-2004 DATA UPDATE;
08-NOV-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00682

Name and characterization of the entry

Description [info] Bacterial type II secretion system protein F signature.
Pattern [info] 
[KRQ]-[LIVMAW]-x(2)-[SAIV]-[LIVM]-x-[TY]-P-x(2)-[LIVM]-x(3)-[STAGV]-x(6)-
[LMY]-x(3)-[LIVMF](2)-P.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_05 which contains 570'420 sequence entries.


Total number of hits 19 in 19 different sequences
Number of true positive hits 19 in 19 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 19 sequences 

COMGB_BACSU (P25954), COMGB_HALH5 (Q9K920), GSPF_AERHY  (P31743), 

GSPF_DICCH  (P31704), GSPF_ECOLI  (P41441), GSPF_KLEPN  (P15745), 
GSPF_PECCC  (P31705), GSPF_PSEAE  (Q00513), GSPF_VIBCH  (P45780), 
GSPF_XANCP  (P31744), HOFC_ECOLI  (P36646), HOFC_HAEIN  (P44621), 
PILC_PSEAE  (P22609), PILC_PSEPU  (P36641), PILC_THET8  (Q5SK58), 
PILC_VIBCH  (Q9X4G9), TAPC_AERHY  (P45793), TCPE_VIBC3  (A5F382), 
TCPE_VIBCH  (P0C6C9)
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