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We are deeply saddened by the passing of Amos Bairoch (1957–2025), the creator of PROSITE. We wish to dedicate our latest paper, published shortly before his death, to him. He will always be a source of inspiration to us.
Our deepest condolences go out to his family and friends, and to all those who had the privilege of working with him. Rest in peace, Amos. Your work will live on long after you are gone.
Amos Bairoch

PROSITE entry PS00874


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PURL: https://purl.expasy.org/prosite/signature/PS00874

Direct ScanProsite submission
General information about the entry

Entry name [info] T2SP_F
Accession [info] PS00874
Entry type [info] PATTERN
Date [info] 01-OCT-1993 CREATED;
01-DEC-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00682

Name and characterization of the entry

Description [info] Bacterial type II secretion system protein F signature.
Pattern [info] 
[KRQ]-[LIVMAW]-x(2)-[SAIV]-[LIVM]-x-[TY]-P-x(2)-[LIVM]-x(3)-[STAGV]-x(6)-
[LMY]-x(3)-[LIVMF](2)-P.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_04 which contains 573'661 sequence entries.


Total number of hits 19 in 19 different sequences
Number of true positive hits 19 in 19 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 19 sequences 

COMGB_BACSU (P25954), COMGB_HALH5 (Q9K920), GSPF_AERHY  (P31743), 

GSPF_DICCH  (P31704), GSPF_ECOLI  (P41441), GSPF_KLEPN  (P15745), 
GSPF_PECCC  (P31705), GSPF_PSEAE  (Q00513), GSPF_VIBCH  (P45780), 
GSPF_XANCP  (P31744), HOFC_ECOLI  (P36646), HOFC_HAEIN  (P44621), 
PILC_PSEAE  (P22609), PILC_PSEPU  (P36641), PILC_THET8  (Q5SK58), 
PILC_VIBCH  (Q9X4G9), TAPC_AERHY  (P45793), TCPE_VIBC3  (A5F382), 
TCPE_VIBCH  (P0C6C9)
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