PROSITE entry PS00882
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General information about the entry
| Entry name [info] | NI_HGENASE_CYTB_1 |
| Accession [info] | PS00882 |
| Entry type [info] | PATTERN |
| Date [info] |
01-OCT-1993 CREATED;
01-OCT-1993 DATA UPDATE; 08-NOV-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00688 |
Name and characterization of the entry
| Description [info] | Nickel-dependent hydrogenases b-type cytochrome subunit signature 1. |
| Pattern [info] |
R-[LIVMFYW]-x-H-W-[LIVM]-x(2)-[LIVMF]-[STAC]-[LIVM]-x(2)-L-x-[LIVM]-T-G. |
Numerical results [info]
| Total number of hits | 9 in 9 different sequences |
| Number of true positive hits | 9 in 9 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 2 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 81.82 % |
Comments [info]
| Taxonomic range [info] | Archaea, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Site [info] | heme(?) at position 4 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
9 sequences
CYBH_AZOCH (Q43953), CYBH_AZOVI (P23000), CYBH_BRADU (P21960), CYBH_CUPNH (P31898), CYBH_ECO57 (P0AAM2), CYBH_ECOLI (P0AAM1), CYBH_RHILV (P27648), CYBH_RHOCA (P16145), CYBH_WOLSU (P31875)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
2 sequences
VHOC_METMA (Q50250), VHTC_METMA (Q50227) |
| PDB [Detailed view] |
2 PDB
4GD3; 6G94 |