PROSITE entry PS00888
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Direct ScanProsite submission
General information about the entry
Entry name [info] | CNMP_BINDING_1 |
Accession [info] | PS00888 |
Entry type [info] | PATTERN |
Date [info] |
01-OCT-1993 CREATED;
01-DEC-2004 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00691 |
Name and characterization of the entry
Description [info] | Cyclic nucleotide-binding domain signature 1. |
Pattern [info] |
[LIVM]-[VIC]-x-{H}-G-[DENQTA]-x-[GAC]-{L}-x-[LIVMFY](4)-x(2)-G. |
Numerical results [info]
Total number of hits | 188 in 130 different sequences |
Number of true positive hits | 177 in 119 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 11 in 11 different sequences |
Number of false negative sequences | 188 |
Number of 'partial' sequences | 1 |
Precision (true positives / (true positives + false positives)) | 94.15 % |
Recall (true positives / (true positives + false negatives)) | 48.49 % |
Comments [info]
Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 3 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
119 sequences
CNBD2_HUMAN (Q96M20), CNBD2_MACFA (Q95JR6), CNBD2_MOUSE (Q9D5U8), CNG1_CHICK (Q90805), CNG3_CHICK (Q90980), CNGA1_BOVIN (Q00194), CNGA1_CANLF (Q28279), CNGA1_HUMAN (P29973), CNGA1_MOUSE (P29974), CNGA1_RAT (Q62927), CNGA2_BOVIN (Q03041), CNGA2_HUMAN (Q16280), CNGA2_MOUSE (Q62398), CNGA2_RABIT (Q28718), CNGA2_RAT (Q00195), CNGA3_BOVIN (Q29441), CNGA3_HUMAN (Q16281), CNGA3_MOUSE (Q9JJZ8), CNGA3_RAT (Q9ER33), CNGA4_HUMAN (Q8IV77), CNGA4_MOUSE (Q3UW12), CNGA4_RAT (Q64359), CNGA_DROME (Q24278), CNGB1_BOVIN (Q28181), CNGB1_HUMAN (Q14028), CNGB1_MOUSE (E1AZ71), CNGB1_RAT (A0A8I5ZN27), CNGB3_CANLF (Q8MJD7), CNGB3_HUMAN (Q9NQW8), CNGB3_MOUSE (Q9JJZ9), CNGK1_RHIEC (Q2K5E1), CNGK1_RHILO (Q98GN8), CNG_CAEEL (Q03611), CNG_ICTPU (P55934), CRP_ECO57 (P0ACK0), CRP_ECOL6 (P0ACJ9), CRP_ECOLI (P0ACJ8), CRP_HAEIN (P29281), CRP_KLEAE (P0A2T7), CRP_PASMU (O05689), CRP_SALTY (P0A2T6), CRP_SHIFL (P0ACK1), EGL4_CAEBR (A8X6H1), EGL4_CAEEL (O76360), GLSA2_BRADU (Q89KV2), HCN1_HUMAN (O60741), HCN1_MOUSE (O88704), HCN1_RABIT (Q9MZS1), HCN1_RAT(Q9JKB0), HCN2_HUMAN (Q9UL51), HCN2_MOUSE (O88703), HCN2_RAT(Q9JKA9), HCN4_HUMAN (Q9Y3Q4), HCN4_MOUSE (O70507), HCN4_RABIT (Q9TV66), HCN4_RAT(Q9JKA7), KAP0_BOVIN (P00514), KAP0_CHICK (Q5ZM91), KAP0_DANRE (Q5I0F6), KAP0_HUMAN (P10644), KAP0_MESAU (P86244), KAP0_MOUSE (Q9DBC7), KAP0_PIG(P07802), KAP0_PONAB (Q5REL1), KAP0_RAT(P09456), KAP1_HUMAN (P31321), KAP1_MOUSE (P12849), KAP1_RAT(P81377), KAP2_BOVIN (P00515), KAP2_HUMAN (P13861), KAP2_MOUSE (P12367), KAP2_RAT(P12368), KAP3_BOVIN (P31322), KAP3_HUMAN (P31323), KAP3_MOUSE (P31324), KAP3_RAT(P12369), KAPR1_DROME (P16905), KAPR2_DROME (P81900), KAPR_APLCA (P31319), KAPR_ASPFU (Q96UX3), KAPR_ASPNG (Q9C196), KAPR_BLAEM (P31320), KAPR_BLUGR (Q9HEP7), KAPR_CAEEL (P30625), KAPR_CANAL (Q9HEW1), KAPR_CANGA (Q6FQL6), KAPR_COLOR (Q9C1C2), KAPR_COLTR (O42794), KAPR_DEBHA (Q6BZG7), KAPR_DICDI (P05987), KAPR_EMENI (O59922), KAPR_EREGS (Q75AM2), KAPR_HYPAT (Q86ZN7), KAPR_KLULA (Q6CPK7), KAPR_MUCCL (Q8TF77), KAPR_NEUCR (Q01386), KAPR_PYRO7 (O14448), KAPR_SCHPO (P36600), KAPR_STRPU (Q26619), KAPR_USTMA (P49605), KAPR_YARLI (Q6C2X0), KAPR_YEAST (P07278), KGP1_BOVIN (P00516), KGP1_DROME (Q03042), KGP1_HUMAN (Q13976), KGP1_MOUSE (P0C605), KGP24_DROME (Q03043), KGP25_DROME (P32023), KGP2_HUMAN (Q13237), KGP2_MOUSE (Q61410), KGP2_RAT(Q64595), KGP_EIMTE (Q8MMZ8), KGP_PLABA (A0A509AKL0), KGP_PLAF7 (Q8I719), KGP_PLAFO (W7JX98), KGP_PLAVS (A5K0N4), KGP_TOXGO (Q8MMZ7), NTE1_SCHPO (Q9USJ4), VFR_PSEAE (P55222)» more
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UniProtKB/Swiss-Prot False negative sequences |
188 sequences
ACH1_ARATH (Q5FYU1), AKT1_ARATH (Q38998), AKT1_ORYSI (P0C550), AKT1_ORYSJ (Q0JKV1), AKT2_ARATH (Q38898), AKT2_ORYSJ (Q75HP9), AKT3_ORYSJ (Q8H569), AKT5_ARATH (Q9SCX5), AKT6_ARATH (Q8GXE6), ANR_PSEPH (O85222), ARCR_STAA1 (A7X715), ARCR_STAA2 (A6U515), ARCR_STAA3 (Q2FDM8), ARCR_STAA8 (Q2FUY1), ARCR_STAA9 (A5IW58), ARCR_STAAB (Q2YWH5), ARCR_STAAC (Q5HCR6), ARCR_STAAE (A6QKC0), ARCR_STAAM (Q99R06), ARCR_STAAN (Q7A381), ARCR_STAAR (Q6GDH1), ARCR_STAAS (Q6G643), ARCR_STAAT (A8Z5D0), ARCR_STAAW (Q8NUK9), ARCR_STAEQ (Q5HKU6), ARCR_STAES (Q8CML2), ARCR_STAHJ (Q4L9J7), CLP_XANAC (Q8PQ45), CLP_XANC8 (Q4UZF6), CLP_XANCB (B0RN01), CLP_XANCP (P22260), CLP_XANE5 (Q3BYB3), CLP_XANOM (Q2NYD9), CLP_XANOP (B2SL05), CLP_XANOR (Q5GV61), CMR_MYCTO (P9WMH4), CMR_MYCTU (P9WMH5), CN15A_MEDTR (G7IBJ4), CN15B_MEDTR (G7JND3), CN15C_MEDTR (A0A072VMJ3), CNBD1_HUMAN (Q8NA66), CNG10_ARATH (Q9LNJ0), CNG11_ARATH (Q9SKD6), CNG12_ARATH (Q8GWD2), CNG13_ARATH (Q9LD40), CNG14_ARATH (Q9SJA4), CNG15_ARATH (Q9SL29), CNG16_ARATH (Q9SU64), CNG17_ARATH (Q8L7Z0), CNG18_ARATH (Q9LEQ3), CNG19_ARATH (Q9LDR2), CNG20_ARATH (Q9LD37), CNGC1_ARATH (O65717), CNGC2_ARATH (O65718), CNGC3_ARATH (Q9SKD7), CNGC4_ARATH (Q94AS9), CNGC5_ARATH (Q8RWS9), CNGC6_ARATH (O82226), CNGC7_ARATH (Q9S9N5), CNGC8_ARATH (Q9FXH6), CNGC9_ARATH (Q9M0A4), CRPL_CORGL (Q79VI7), CRPL_MYCTO (P9WMH2), CRPL_MYCTU (P9WMH3), GBPC_DICDI (Q8MVR1), GBPD_DICDI (Q54S40), GORK_ARATH (Q94A76), HCN3_HUMAN (Q9P1Z3), HCN3_MOUSE (O88705), HCN3_RAT(Q9JKA8), KAT1_ARATH (Q39128), KAT1_ORYSJ (Q6K3T2), KAT2_ARATH (Q38849), KAT2_ORYSJ (Q5QNI1), KAT3_ARATH (P92960), KAT3_ORYSJ (Q5JM04), KAT4_ORYSJ (Q652U9), KAT5_ORYSJ (Q7XT08), KAT6_ORYSJ (A2ZX97), KCNAE_DROME (Q02280), KCNH1_BOVIN (O18965), KCNH1_HUMAN (O95259), KCNH1_MOUSE (Q60603), KCNH1_RAT (Q63472), KCNH2_CANLF (Q9TSZ3), KCNH2_HUMAN (Q12809), KCNH2_MOUSE (O35219), KCNH2_RABIT (Q8WNY2), KCNH2_RAT (O08962), KCNH3_HUMAN (Q9ULD8), KCNH3_MOUSE (Q9WVJ0), KCNH3_RAT (O89047), KCNH4_HUMAN (Q9UQ05), KCNH4_RAT (Q9R1T9), KCNH5_HUMAN (Q8NCM2), KCNH5_MOUSE (Q920E3), KCNH5_RAT (Q9EPI9), KCNH6_CHICK (Q9PT84), KCNH6_HUMAN (Q9H252), KCNH6_RAT (O54853), KCNH7_HUMAN (Q9NS40), KCNH7_MOUSE (Q9ER47), KCNH7_RAT (O54852), KCNH8_HUMAN (Q96L42), KCNH8_MOUSE (P59111), KCNH8_RAT (Q9QWS8), KGP1_RABIT (O77676), KOR1_ORYSJ (Q653P0), KOR2_ORYSJ (Q7XUW4), LDRP_THET2 (Q746J8), LDRP_THET8 (Q53W63), NTE1_ASPCL (A1C9L6), NTE1_ASPFU (Q4WA15), NTE1_ASPNC (A2R350), NTE1_ASPOR (Q2UDH2), NTE1_ASPTN (Q0CNC7), NTE1_CANAL (Q5A368), NTE1_CANGA (Q6FKJ1), NTE1_CHAGB (Q2H0D3), NTE1_COCIM (Q1DLC7), NTE1_CRYNB (P0CP37), NTE1_CRYNJ (P0CP36), NTE1_DEBHA (Q6BQK9), NTE1_EMENI (Q5BAE9), NTE1_EREGS (Q756Z0), NTE1_KLULA (Q6CWC2), NTE1_LODEL (A5E708), NTE1_NEOFI (A1D9Y2), NTE1_NEUCR (Q7S8J1), NTE1_PHANO (Q0UJ42), NTE1_PICGU (A5DHA3), NTE1_PICST (A3LYZ4), NTE1_PYRO7 (A4QVZ8), NTE1_USTMA (Q4PF83), NTE1_YARLI (Q6CF18), NTE1_YEAST (Q04958), P2C19_ARATH (Q9SL76), PAT_MYCS2 (A0R3F9), PAT_MYCTU (O05581), PCTIR_BURCE (A0A0J5WTU0), PCTIR_PSEAI (P0DV41), PCTIR_RHOS2 (A0A1V0HUU2), PCTIR_XANPE (P0DV29), PDE5_DICDI (Q8MLZ3), PDE6_DICDI (Q8MM62), PLPL6_CAEEL (Q21534), PLPL6_HUMAN (Q8IY17), PLPL6_MOUSE (Q3TRM4), PLPL6_PONAB (Q5RDS0), PLPL7_CAEEL (Q02331), PLPL7_HUMAN (Q6ZV29), PLPL7_MOUSE (A2AJ88), PLPL7_RAT (Q5BK26), RPGF1_CAEEL (P34578), RPGF2_BOVIN (F1MSG6), RPGF2_CANLF (F1PBJ0), RPGF2_HUMAN (Q9Y4G8), RPGF2_MOUSE (Q8CHG7), RPGF2_RAT (F1M386), RPGF3_HUMAN (O95398), RPGF3_MOUSE (Q8VCC8), RPGF3_RAT (Q9Z1C8), RPGF4_HUMAN (Q8WZA2), RPGF4_MOUSE (Q9EQZ6), RPGF_CAEEL (G5EDB9), SDRP_THET8 (Q5SIL0), SKOR_ARATH (Q9M8S6), SL9C1_HUMAN (Q4G0N8), SL9C1_MOUSE (Q6UJY2), SL9C2_HUMAN (Q5TAH2), SWS_DROAN (B3MRI9), SWS_DROER (B3NY03), SWS_DROGR (B4JLX2), SWS_DROME (Q9U969), SWS_DROMO (B4L535), SWS_DROPE (B4H3U8), SWS_DROPS (B5DKS8), SWS_DROSE (B4IL64), SWS_DROVI (B4M709), SWS_DROWI (B4N1W9), SWS_DROYA (B4Q0P3), UEX_DROME (A0A0B7P9G0), Y073_MYCTO (P9WQK4), Y073_MYCTU (P9WQK5), Y2565_MYCTO (P9WIY6), Y2565_MYCTU (P9WIY7), Y2594_MYCBO (P0A643), Y4233_RHOPA (Q02006)» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
KAP2_PIG(P05207) |
UniProtKB/Swiss-Prot False positive sequences |
11 sequences
ALG11_HUMAN (Q2TAA5), ALG11_PONAB (Q5R7Z6), CARA_SULTO (Q970U8), CBIMQ_METLZ (A2SSD6), DAPB_PYRO7 (A4QYQ5), DESA_PICP2 (Q55231), EPHA_MYCTU (I6YGS0), SFSA_GEOMG (Q39WK9), SFSA_GEOSL (P61664), SFSA_TRIEI (Q111B4), SYT15_HUMAN (Q9BQS2)» more |
PDB [Detailed view] |
208 PDB
1CGP; 1CX4; 1G6N; 1HW5; 1I5Z; 1I6X; 1J59; 1LB2; 1NE4; 1NE6; 1O3Q; 1O3R; 1O3S; 1O3T; 1Q3E; 1Q43; 1Q5O; 1RGS; 1RL3; 1RUN; 1RUO; 1U12; 1VP6; 1ZRC; 1ZRD; 1ZRE; 1ZRF; 2CGP; 2GZW; 2K0G; 2KXL; 2MNG; 2MPF; 2OZ6; 2Q0A; 2QCS; 2QVS; 2WC2; 2ZD9; 3BEH; 3BPZ; 3CL1; 3CLP; 3CO2; 3ETQ; 3FFQ; 3FHI; 3FWE; 3HIF; 3IDB; 3IDC; 3IIA; 3IYD; 3J4Q; 3J4R; 3KCC; 3N4M; 3OCP; 3OD0; 3OF1; 3OGJ; 3OTF; 3PLQ; 3PNA; 3PVB; 3QOP; 3RDI; 3ROU; 3RPQ; 3RYP; 3RYR; 3SHR; 3TNP; 3TNQ; 3U0Z; 3U10; 3U11; 4BH9; 4BHP; 4CHV; 4CHW; 4DIN; 4FT8; 4HBN; 4HZF; 4I01; 4I02; 4I09; 4I0A; 4I0B; 4JV4; 4JVA; 4KL1; 4KU7; 4KU8; 4MUV; 4MX3; 4NVP; 4OFF; 4OFG; 4QX5; 4QXK; 4R8H; 4RZ7; 4WBB; 4X6Q; 4X6R; 4Z07; 5BV6; 5C6C; 5C8W; 5CIZ; 5DYK; 5DYL; 5DZC; 5E16; 5EZR; 5F0A; 5FET; 5H3O; 5J48; 5JAX; 5JD7; 5JIX; 5JIZ; 5JON; 5JR7; 5KHG; 5KHH; 5KHI; 5KHJ; 5KHK; 5KJX; 5KJY; 5KJZ; 5L0N; 5U6O; 5U6P; 6B6H; 6BQ8; 6BYR; 6BYS; 6EO1; 6GYN; 6GYO; 6I9D; 6IAX; 6M63; 6NO7; 6PB4; 6PB5; 6PB6; 6QCY; 6QCZ; 6QD0; 6QD1; 6QD2; 6QD3; 6QD4; 6UQF; 6UQG; 6WEJ; 6WEK; 6WEL; 6WJF; 6WJG; 7FEW; 7FF0; 7FF8; 7FF9; 7LFT; 7LFW; 7LFX; 7LFY; 7LG1; 7LV3; 7LZ4; 7MBJ; 7N15; 7N16; 7N17; 7NMN; 7NP3; 7NP4; 7O4H; 7RH9; 7RHG; 7RHH; 7RHI; 7RHJ; 7RHK; 7RHL; 7RHS; 7SSB; 7T4T; 7T4U; 7T4V; 7T4W; 8BX7; 8EM8; 8ETP; 8EU3; 8EUC; 8EV8; 8EV9; 8EVA; 8EVB; 8EVC » more |