PROSITE logo

PROSITE entry PS00900


View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission
General information about the entry

Entry name [info] RNA_POL_PHAGE_1
Accession [info] PS00900
Entry type [info] PATTERN
Date [info] 01-OCT-1993 CREATED;
01-OCT-1993 DATA UPDATE;
27-MAR-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00410
Associated ProRule [info] PRU10031

Name and characterization of the entry

Description [info] Bacteriophage-type RNA polymerase family active site signature 1.
Pattern [info] 
P-[LIVM]-x(2)-D-[GA]-[ST]-[AC]-[SN]-[GA]-[LIVMFY]-Q.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_02 which contains 571'282 sequence entries.


Total number of hits 27 in 27 different sequences
Number of true positive hits 27 in 27 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Bacteriophages, Eukaryotes
Maximum number of repetitions [info] 1
Site [info] active_site at position 4
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 27 sequences 

RPO1B_TOBAC (Q8L6J5), RPO2A_TOBAC (Q8L6J2), RPO2B_TOBAC (Q8L6J3), 

RPO3A_TOBAC (P69243), RPO3B_TOBAC (Q8L6J1), RPOL_BPK11  (P18147), 
RPOL_BPSP6  (P06221), RPOL_BPT3   (P07659), RPOL_BPT7   (P00573), 
RPOM_HUMAN  (O00411), RPOM_MOUSE  (Q8BKF1), RPOM_NEUCR  (P38671), 
RPOM_SCHPO  (O13993), RPOM_YEAST  (P13433), RPOP_AGABT  (P33539), 
RPOP_CLAPU  (P22372), RPOP_GELSP  (O03685), RPOP_MAIZE  (P10581), 
RPOP_NEUCS  (P33540), RPOP_NEUIN  (P33541), RPOP_PODAS  (Q01521), 
RPOT1_ARATH (P92969), RPOT1_NICSY (Q93Y94), RPOT2_ARATH (Q9LFV6), 
RPOT2_NICSY (Q8VWF8), RPOT3_ARATH (O24600), RPOT3_NICSY (P69242)
» more

PDB
[Detailed view]		 37 PDB

1ARO; 1CEZ; 1H38; 1MSW; 1QLN; 1S0V; 1S76; 1S77; 2PI4; 2PI5; 3E2E; 3E3J; 3SPA; 4BOC; 4RNP; 5OLA; 6ERP; 6ERQ; 6YMV; 6YMW; 7A8P; 7PZP; 7PZR; 7ZC4; 8AP1; 8ATT; 8ATV; 8ATW; 8C5S; 8C5U; 8DH0; 8DH1; 8DH2; 8DH3; 8DH4; 8DH5; 8Q63
» more