![]() |
|
Entry: PS00914 |
Entry name [info] | SYNTAXIN |
Accession [info] | PS00914 |
Entry type [info] | PATTERN |
Date [info] |
01-OCT-1993 CREATED;
01-DEC-2004 DATA UPDATE; 10-FEB-2021 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00709 |
Description [info] | Syntaxin / epimorphin family signature. |
Pattern [info] |
[RQLKA]-x(3)-[LIVMAW]-x(2)-[LIVM]-[ESHLKAGQV]-x(2)-[LIVMT]-x-[DEVMNRAST]- [LIVMT]-x(2)-[LIVMQ]-[FSAQGVM]-x(2)-[LIVMF]-x(3)-[LIVT]-x(2)-Q- [GADEQVST]-x(2)-[LIVMA]-[DNQTEI]-x-[LIVMF]-[DESVHAG]-x(2,3)-[LIVM]. |
Total number of hits | 99 in 99 different sequences |
Number of true positive hits | 99 in 99 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 14 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 87.61 % |
Taxonomic range [info] | Eukaryotes |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
UniProtKB/Swiss-Prot True positive sequences |
99 sequences
PEP12_YEAST (P32854 ), PSY1_SCHPO (Q9USH7 ), SED5_YEAST (Q01590 ), SSO1_YEAST (P32867 ), SSO2_CANAL (Q59YF0 ), SSO2_YEAST (P39926 ), STX10_HUMAN (O60499 ), STX11_HUMAN (O75558 ), STX11_MOUSE (Q9D3G5 ), STX12_HUMAN (Q86Y82 ), STX12_MOUSE (Q9ER00 ), STX12_PONAB (Q5RBW6 ), STX12_RAT (G3V7P1 ), STX16_HUMAN (O14662 ), STX16_MOUSE (Q8BVI5 ), STX17_BOVIN (Q5E9Y2 ), STX17_HUMAN (P56962 ), STX17_MOUSE (Q9D0I4 ), STX17_RAT (Q9Z158 ), STX18_DANRE (Q4VBI7 ), STX18_HUMAN (Q9P2W9 ), STX18_MOUSE (Q8VDS8 ), STX18_PONAB (Q5REB4 ), STX18_RAT (Q68FW4 ), STX19_BOVIN (Q0VCI2 ), STX19_HUMAN (Q8N4C7 ), STX19_MOUSE (Q8R1Q0 ), STX19_PONAB (Q5RAL4 ), STX1A_BOVIN (P32850 ), STX1A_CAEBR (A8WVD0 ), STX1A_CAEEL (O16000 ), STX1A_DROME (Q24547 ), STX1A_HUMAN (Q16623 ), STX1A_MOUSE (O35526 ), STX1A_PONAB (Q5R4L2 ), STX1A_RAT (P32851 ), STX1B_BOVIN (P61267 ), STX1B_HUMAN (P61266 ), STX1B_MOUSE (P61264 ), STX1B_RAT (P61265 ), STX1B_SHEEP (P61268 ), STX2_CAEEL (Q20574 ), STX2_HUMAN (P32856 ), STX2_MOUSE (Q00262 ), STX2_RAT (P50279 ), STX3_CAEEL (Q20024 ), STX3_HUMAN (Q13277 ), STX3_MOUSE (Q64704 ), STX3_RAT (Q08849 ), STX4_BOVIN (Q3SWZ3 ), STX4_CAEEL (P91409 ), STX4_HUMAN (Q12846 ), STX4_MOUSE (P70452 ), STX4_RAT (Q08850 ), STX5_BOVIN (Q08DB5 ), STX5_CAEEL (Q20797 ), STX5_DROME (Q24509 ), STX5_HUMAN (Q13190 ), STX5_MOUSE (Q8K1E0 ), STX5_RAT (Q08851 ), STX6_CAEEL (P83528 ), STX6_CHICK (Q5ZL19 ), STX6_HUMAN (O43752 ), STX6_MOUSE (Q9JKK1 ), STX6_PONAB (Q5R6Q2 ), STX6_RAT (Q63635 ), STX7A_DICDI (Q54JY7 ), STX7_BOVIN (Q3ZBT5 ), STX7_HUMAN (O15400 ), STX7_MOUSE (O70439 ), STX7_PONAB (Q5R602 ), STX7_RAT (O70257 ), STX_APLCA (Q16932 ), SY111_ARATH (Q42374 ), SY112_ARATH (Q9ZPV9 ), SY121_ARATH (Q9ZSD4 ), SY122_ARATH (Q9SVC2 ), SY123_ARATH (Q9ZQZ8 ), SY124_ARATH (O64791 ), SY125_ARATH (Q9SXB0 ), SY131_ARATH (Q9SRV7 ), SY132_ARATH (Q8VZU2 ), SYP21_ARATH (Q39233 ), SYP22_ARATH (P93654 ), SYP23_ARATH (O04378 ), SYP31_ARATH (Q9FFK1 ), SYP32_ARATH (Q9LK09 ), SYP41_ARATH (O65359 ), SYP42_ARATH (Q9SWH4 ), SYP43_ARATH (Q9SUJ1 ), SYP51_ARATH (Q9SA23 ), SYP52_ARATH (Q94KK7 ), SYP61_ARATH (Q946Y7 ), SYP71_ARATH (Q9SF29 ), SYP72_ARATH (Q94KK6 ), SYP73_ARATH (Q94KK5 ), TLG1_YEAST (Q03322 ), TLG2_YEAST (Q08144 ), VAM3_YEAST (Q12241 )» more
|
UniProtKB/Swiss-Prot False negative sequences |
14 sequences
FSV1_SCHPO (O14222 ), PEP12_SCHPO (O94651 ), SED5_SCHPO (O13644 ), STX8A_DICDI (Q553P5 ), STX8_BOVIN (Q3T075 ), STX8_HUMAN (Q9UNK0 ), STX8_MOUSE (O88983 ), STX8_RAT (Q9Z2Q7 ), SYP24_ARATH (Q9C615 ), SYP81_ARATH (P59277 ), TLG1_SCHPO (Q9HGN3 ), TLG2_SCHPO (Q9P6P1 ), UFE1_SCHPO (O94531 ), UFE1_YEAST (P41834 )» more |
PDB [Detailed view] |
35 PDB
1GL2; 1HVV; 1JTH; 1KIL; 1N7S; 1SFC; 1URQ; 2M8R; 2N1T; 2NPS; 3B5N; 3C98; 3HD7; 3IPD; 3J96; 3J97; 3J98; 3J99; 3RK2; 3RK3; 3RL0; 4JEH; 4JEU; 5CCG; 5CCH; 5CCI; 5KJ7; 5KJ8; 5W5C; 5W5D; 6IP1; 6MDM; 6MDN; 6MTI; 7BV6 » more |