Home  |  Contact
Entry: PS00914

General information about the entry

Entry name [info] SYNTAXIN
Accession [info] PS00914
Entry type [info] PATTERN
Date [info] 01-OCT-1993 CREATED;
01-DEC-2004 DATA UPDATE;
10-FEB-2021 INFO UPDATE.
PROSITE Doc. [info] PDOC00709

Name and characterization of the entry

Description [info] Syntaxin / epimorphin family signature.
Pattern [info] 
[RQLKA]-x(3)-[LIVMAW]-x(2)-[LIVM]-[ESHLKAGQV]-x(2)-[LIVMT]-x-[DEVMNRAST]-
[LIVMT]-x(2)-[LIVMQ]-[FSAQGVM]-x(2)-[LIVMF]-x(3)-[LIVT]-x(2)-Q-
[GADEQVST]-x(2)-[LIVMA]-[DNQTEI]-x-[LIVMF]-[DESVHAG]-x(2,3)-[LIVM].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2021_01 which contains 564'277 sequence entries.


Total number of hits 99 in 99 different sequences
Number of true positive hits 99 in 99 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 14
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 87.61 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 99 sequences 

PEP12_YEAST (P32854    ), PSY1_SCHPO  (Q9USH7    ), SED5_YEAST  (Q01590    ), 

SSO1_YEAST  (P32867    ), SSO2_CANAL  (Q59YF0    ), SSO2_YEAST  (P39926    ), 
STX10_HUMAN (O60499    ), STX11_HUMAN (O75558    ), STX11_MOUSE (Q9D3G5    ), 
STX12_HUMAN (Q86Y82    ), STX12_MOUSE (Q9ER00    ), STX12_PONAB (Q5RBW6    ), 
STX12_RAT   (G3V7P1    ), STX16_HUMAN (O14662    ), STX16_MOUSE (Q8BVI5    ), 
STX17_BOVIN (Q5E9Y2    ), STX17_HUMAN (P56962    ), STX17_MOUSE (Q9D0I4    ), 
STX17_RAT   (Q9Z158    ), STX18_DANRE (Q4VBI7    ), STX18_HUMAN (Q9P2W9    ), 
STX18_MOUSE (Q8VDS8    ), STX18_PONAB (Q5REB4    ), STX18_RAT   (Q68FW4    ), 
STX19_BOVIN (Q0VCI2    ), STX19_HUMAN (Q8N4C7    ), STX19_MOUSE (Q8R1Q0    ), 
STX19_PONAB (Q5RAL4    ), STX1A_BOVIN (P32850    ), STX1A_CAEBR (A8WVD0    ), 
STX1A_CAEEL (O16000    ), STX1A_DROME (Q24547    ), STX1A_HUMAN (Q16623    ), 
STX1A_MOUSE (O35526    ), STX1A_PONAB (Q5R4L2    ), STX1A_RAT   (P32851    ), 
STX1B_BOVIN (P61267    ), STX1B_HUMAN (P61266    ), STX1B_MOUSE (P61264    ), 
STX1B_RAT   (P61265    ), STX1B_SHEEP (P61268    ), STX2_CAEEL  (Q20574    ), 
STX2_HUMAN  (P32856    ), STX2_MOUSE  (Q00262    ), STX2_RAT    (P50279    ), 
STX3_CAEEL  (Q20024    ), STX3_HUMAN  (Q13277    ), STX3_MOUSE  (Q64704    ), 
STX3_RAT    (Q08849    ), STX4_BOVIN  (Q3SWZ3    ), STX4_CAEEL  (P91409    ), 
STX4_HUMAN  (Q12846    ), STX4_MOUSE  (P70452    ), STX4_RAT    (Q08850    ), 
STX5_BOVIN  (Q08DB5    ), STX5_CAEEL  (Q20797    ), STX5_DROME  (Q24509    ), 
STX5_HUMAN  (Q13190    ), STX5_MOUSE  (Q8K1E0    ), STX5_RAT    (Q08851    ), 
STX6_CAEEL  (P83528    ), STX6_CHICK  (Q5ZL19    ), STX6_HUMAN  (O43752    ), 
STX6_MOUSE  (Q9JKK1    ), STX6_PONAB  (Q5R6Q2    ), STX6_RAT    (Q63635    ), 
STX7A_DICDI (Q54JY7    ), STX7_BOVIN  (Q3ZBT5    ), STX7_HUMAN  (O15400    ), 
STX7_MOUSE  (O70439    ), STX7_PONAB  (Q5R602    ), STX7_RAT    (O70257    ), 
STX_APLCA   (Q16932    ), SY111_ARATH (Q42374    ), SY112_ARATH (Q9ZPV9    ), 
SY121_ARATH (Q9ZSD4    ), SY122_ARATH (Q9SVC2    ), SY123_ARATH (Q9ZQZ8    ), 
SY124_ARATH (O64791    ), SY125_ARATH (Q9SXB0    ), SY131_ARATH (Q9SRV7    ), 
SY132_ARATH (Q8VZU2    ), SYP21_ARATH (Q39233    ), SYP22_ARATH (P93654    ), 
SYP23_ARATH (O04378    ), SYP31_ARATH (Q9FFK1    ), SYP32_ARATH (Q9LK09    ), 
SYP41_ARATH (O65359    ), SYP42_ARATH (Q9SWH4    ), SYP43_ARATH (Q9SUJ1    ), 
SYP51_ARATH (Q9SA23    ), SYP52_ARATH (Q94KK7    ), SYP61_ARATH (Q946Y7    ), 
SYP71_ARATH (Q9SF29    ), SYP72_ARATH (Q94KK6    ), SYP73_ARATH (Q94KK5    ), 
TLG1_YEAST  (Q03322    ), TLG2_YEAST  (Q08144    ), VAM3_YEAST  (Q12241    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 14 sequences 

FSV1_SCHPO  (O14222    ), PEP12_SCHPO (O94651    ), SED5_SCHPO  (O13644    ), 

STX8A_DICDI (Q553P5    ), STX8_BOVIN  (Q3T075    ), STX8_HUMAN  (Q9UNK0    ), 
STX8_MOUSE  (O88983    ), STX8_RAT    (Q9Z2Q7    ), SYP24_ARATH (Q9C615    ), 
SYP81_ARATH (P59277    ), TLG1_SCHPO  (Q9HGN3    ), TLG2_SCHPO  (Q9P6P1    ), 
UFE1_SCHPO  (O94531    ), UFE1_YEAST  (P41834    )
» more

PDB
[Detailed view]		 35 PDB

1GL2; 1HVV; 1JTH; 1KIL; 1N7S; 1SFC; 1URQ; 2M8R; 2N1T; 2NPS; 3B5N; 3C98; 3HD7; 3IPD; 3J96; 3J97; 3J98; 3J99; 3RK2; 3RK3; 3RL0; 4JEH; 4JEU; 5CCG; 5CCH; 5CCI; 5KJ7; 5KJ8; 5W5C; 5W5D; 6IP1; 6MDM; 6MDN; 6MTI; 7BV6
» more

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission