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PROSITE entry PS00939


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General information about the entry

Entry name [info] RIBOSOMAL_L1E
Accession [info] PS00939
Entry type [info] PATTERN
Date [info] 01-JUN-1994 CREATED;
01-DEC-2004 DATA UPDATE;
08-NOV-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00724

Name and characterization of the entry

Description [info] Ribosomal protein L1e signature.
Pattern [info] 
[NP]-x(3)-[KRM]-x(2)-A-[LIVTK]-x-[SA]-[AC]-[LIV]-x-[ALCM]-[STL]-[SGAKTI]-
x(7)-[RK]-[GS]-H.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_05 which contains 570'420 sequence entries.


Total number of hits 67 in 67 different sequences
Number of true positive hits 67 in 67 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 2
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 97.10 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 67 sequences 

RL4A_ARATH  (Q9SF40), RL4A_SCHPO  (P35679), RL4A_XENLA  (P08429), 

RL4A_YEAST  (P10664), RL4B_ARATH  (P49691), RL4B_CANAL  (A0A1D8PFV1), 
RL4B_SCHPO  (Q9P784), RL4B_XENLA  (P02385), RL4B_YEAST  (P49626), 
RL4_AERPE   (Q9YFM1), RL4_ARCFU   (O28355), RL4_BOVIN   (Q58DW0), 
RL4_CAEEL   (O02056), RL4_CANLF   (Q28346), RL4_DICDI   (Q54Z69), 
RL4_DROME   (P09180), RL4_ENTH1   (O15594), RL4_HALLT   (B9LSS6), 
RL4_HALMA   (P12735), RL4_HALS3   (B0R657), RL4_HALSA   (Q9HPD3), 
RL4_HUMAN   (P36578), RL4_MACFA   (Q4R5P9), RL4_META3   (A6UV67), 
RL4_METAC   (Q8TRU6), RL4_METBU   (Q12ZV0), RL4_METHJ   (Q2FU92), 
RL4_METJA   (P54015), RL4_METKA   (Q8TY91), RL4_METM5   (A4FVY1), 
RL4_METM6   (A9A9B7), RL4_METM7   (A6VHD3), RL4_METMA   (Q8PV49), 
RL4_METMJ   (A3CSZ8), RL4_METMP   (P60846), RL4_METS3   (A5UL88), 
RL4_METST   (Q2NFV7), RL4_METTH   (O26111), RL4_METTP   (A0B9W9), 
RL4_METVS   (A6UQJ1), RL4_MOUSE   (Q9D8E6), RL4_NANEQ   (P60847), 
RL4_NATPD   (Q3IMY7), RL4_PONAB   (Q5RCR3), RL4_PRUAR   (Q9XF97), 
RL4_PYRAB   (Q9V1T6), RL4_PYRAE   (Q8ZW51), RL4_PYRFU   (Q8TZZ9), 
RL4_PYRHO   (O59420), RL4_RAT (P50878), RL4_SACS2   (Q9UXA6), 
RL4_SULIA   (C3N5S8), RL4_SULIK   (C4KHF7), RL4_SULIL   (C3MQ60), 
RL4_SULIM   (C3MVH9), RL4_SULIN   (C3NHA8), RL4_SULIY   (C3NEE4), 
RL4_SULTO   (Q975I2), RL4_TETTS   (P0DJ55), RL4_THEAC   (Q9HIR0), 
RL4_THEGJ   (C5A285), RL4_THEKO   (Q5JDI0), RL4_THEON   (B6YSL4), 
RL4_THESM   (C6A160), RL4_THEVO   (Q97BX6), RL4_TRYBB   (P49669), 
RL4_URECA   (P49165)
» more

UniProtKB/Swiss-Prot
False negative sequences		 2 sequences 

RL4_HALWD   (Q18GF0), RL4_METB6   (A7I5P0)


				
	

	

		UniProtKB/Swiss-Prot
'Partial' sequences		
		
			2 sequences
			


			
RL4_PIG (Q29187), RL4_XENTR   (P14117)


				
	

	

		PDB
[Detailed view]		
		
			338 PDB
			


			1FFK; 1JJ2; 1K73; 1K8A; 1K9M; 1KC8; 1KD1; 1KQS; 1M1K; 1M90; 1ML5; 1N8R; 
			
				1NJI; 1Q7Y; 1Q81; 1Q82; 1Q86; 1QVF; 1QVG; 1S72; 1VQ4; 1VQ5; 1VQ6; 1VQ7; 
				1VQ8; 1VQ9; 1VQK; 1VQL; 1VQM; 1VQN; 1VQO; 1VQP; 1W2B; 1YHQ; 1YI2; 1YIJ; 
				1YIT; 1YJ9; 1YJN; 1YJW; 2OTJ; 2OTL; 2QA4; 2QEX; 2WW9; 2WWA; 2WWB; 3CC2; 
				3CC4; 3CC7; 3CCE; 3CCJ; 3CCL; 3CCM; 3CCQ; 3CCR; 3CCS; 3CCU; 3CCV; 3CD6; 
				3CMA; 3CME; 3CPW; 3CXC; 3G4S; 3G6E; 3G71; 3I55; 3I56; 3J6X; 3J6Y; 3J77; 
				3J78; 3JCT; 3OW2; 4ADX; 4U3M; 4U3N; 4U3U; 4U4N; 4U4O; 4U4Q; 4U4R; 4U4U; 
				4U4Y; 4U4Z; 4U50; 4U51; 4U52; 4U53; 4U55; 4U56; 4U6F; 4UG0; 4V42; 4V4B; 
				4V4N; 4V4R; 4V4S; 4V4T; 4V5Z; 4V6I; 4V6U; 4V6W; 4V6X; 4V7F; 4V7R; 4V88; 
				4V8P; 4V8T; 4V8Y; 4V8Z; 4V91; 4V9F; 5A8L; 5AJ0; 5APN; 5APO; 5DAT; 5DC3; 
				5DGE; 5DGF; 5DGV; 5FCI; 5FCJ; 5GAK; 5H4P; 5I4L; 5JCS; 5JUO; 5JUP; 5JUS; 
				5JUT; 5JUU; 5LKS; 5LYB; 5M1J; 5MC6; 5MEI; 5NDG; 5NDV; 5NDW; 5OBM; 5ON6; 
				5T2C; 5T62; 5T6R; 5TBW; 5TGA; 5TGM; 5Z3G; 6C0F; 6CB1; 6ELZ; 6EM1; 6EM3; 
				6EM4; 6EM5; 6FT6; 6GQ1; 6GQB; 6GQV; 6HD7; 6HHQ; 6I7O; 6IP5; 6IP6; 6IP8; 
				6LQM; 6LSR; 6LSS; 6LU8; 6M62; 6N8J; 6N8K; 6N8L; 6N8M; 6N8N; 6N8O; 6OIG; 
				6OLE; 6OLF; 6OLG; 6OLI; 6OLZ; 6OM0; 6OM7; 6Q8Y; 6QIK; 6QT0; 6QTZ; 6QZP; 
				6R84; 6R86; 6R87; 6RI5; 6RZZ; 6S05; 6S47; 6SKF; 6SKG; 6SNT; 6SV4; 6SWA; 
				6T4Q; 6T7I; 6T7T; 6T83; 6TB3; 6TH6; 6TNU; 6W6L; 6WOO; 6XA1; 6XU6; 6XU7; 
				6XU8; 6Y0G; 6Y2L; 6Y57; 6Y6X; 6YLG; 6YLH; 6YLX; 6YLY; 6Z6J; 6Z6K; 6Z6L; 
				6Z6M; 6Z6N; 6ZM7; 6ZME; 6ZMI; 6ZMO; 7AZY; 7B7D; 7BHP; 7BT6; 7BTB; 7CPU; 
				7CPV; 7F5S; 7LS1; 7LS2; 7MPI; 7MPJ; 7N8B; 7NAC; 7NRC; 7NRD; 7OF1; 7OH3; 
				7OHP; 7OHQ; 7OHR; 7OHS; 7OHT; 7OHU; 7OHV; 7OHW; 7OHX; 7OHY; 7OW7; 7OYC; 
				7PZY; 7Q08; 7Q0F; 7Q0P; 7Q0R; 7QGG; 7QVP; 7R7A; 7U0H; 7UG6; 7UOO; 7UQB; 
				7UQZ; 7V08; 7XNX; 7XNY; 7Z34; 7ZS5; 7ZUX; 7ZW0; 8A3D; 8AAF; 8AGT; 8AGV; 
				8AGW; 8AGX; 8AGZ; 8BIP; 8BJQ; 8BQX; 8E5T; 8ESQ; 8ESR; 8ETC; 8ETG; 8ETH; 
				8ETI; 8ETJ; 8EUG; 8EUI; 8EUP; 8EUY; 8EV3; 8FKP; 8FKQ; 8FKR; 8FKS; 8FKT; 
				8FKU; 8FKV; 8FKW; 8FKX; 8FKY; 8FKZ; 8FL0; 8FL2; 8FL3; 8FL4; 8FL6; 8FL7; 
				8FL9; 8FLA; 8FLB; 8FLC; 8FLD; 8FLE; 8FLF; 8G5Y; 8G5Z; 8G60; 8G61; 8G6J; 
				8GLP; 8HFR
			
			

			» more