Home  |  Contact
Entry: PS00939

General information about the entry

Entry name [info] RIBOSOMAL_L1E
Accession [info] PS00939
Entry type [info] PATTERN
Date [info] 01-JUN-1994 CREATED;
01-DEC-2004 DATA UPDATE;
07-APR-2021 INFO UPDATE.
PROSITE Doc. [info] PDOC00724

Name and characterization of the entry

Description [info] Ribosomal protein L1e signature.
Pattern [info]
[NP]-x(3)-[KRM]-x(2)-A-[LIVTK]-x-[SA]-[AC]-[LIV]-x-[ALCM]-[STL]-[SGAKTI]-
x(7)-[RK]-[GS]-H.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2021_02 which contains 564'638 sequence entries.


Total number of hits 66 in 66 different sequences
Number of true positive hits 66 in 66 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 2
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 97.06 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
66 sequences

RL4A_ARATH  (Q9SF40    ), RL4A_SCHPO  (P35679    ), RL4A_XENLA  (P08429    ), 
RL4A_YEAST  (P10664    ), RL4B_ARATH  (P49691    ), RL4B_SCHPO  (Q9P784    ), 
RL4B_XENLA  (P02385    ), RL4B_YEAST  (P49626    ), RL4_AERPE   (Q9YFM1    ), 
RL4_ARCFU   (O28355    ), RL4_BOVIN   (Q58DW0    ), RL4_CAEEL   (O02056    ), 
RL4_CANLF   (Q28346    ), RL4_DICDI   (Q54Z69    ), RL4_DROME   (P09180    ), 
RL4_ENTHI   (O15594    ), RL4_HALLT   (B9LSS6    ), RL4_HALMA   (P12735    ), 
RL4_HALS3   (B0R657    ), RL4_HALSA   (Q9HPD3    ), RL4_HUMAN   (P36578    ), 
RL4_MACFA   (Q4R5P9    ), RL4_META3   (A6UV67    ), RL4_METAC   (Q8TRU6    ), 
RL4_METBU   (Q12ZV0    ), RL4_METHJ   (Q2FU92    ), RL4_METJA   (P54015    ), 
RL4_METKA   (Q8TY91    ), RL4_METM5   (A4FVY1    ), RL4_METM6   (A9A9B7    ), 
RL4_METM7   (A6VHD3    ), RL4_METMA   (Q8PV49    ), RL4_METMJ   (A3CSZ8    ), 
RL4_METMP   (P60846    ), RL4_METS3   (A5UL88    ), RL4_METST   (Q2NFV7    ), 
RL4_METTH   (O26111    ), RL4_METTP   (A0B9W9    ), RL4_METVS   (A6UQJ1    ), 
RL4_MOUSE   (Q9D8E6    ), RL4_NANEQ   (P60847    ), RL4_NATPD   (Q3IMY7    ), 
RL4_PONAB   (Q5RCR3    ), RL4_PRUAR   (Q9XF97    ), RL4_PYRAB   (Q9V1T6    ), 
RL4_PYRAE   (Q8ZW51    ), RL4_PYRFU   (Q8TZZ9    ), RL4_PYRHO   (O59420    ), 
RL4_RAT     (P50878    ), RL4_SACS2   (Q9UXA6    ), RL4_SULIA   (C3N5S8    ), 
RL4_SULIK   (C4KHF7    ), RL4_SULIL   (C3MQ60    ), RL4_SULIM   (C3MVH9    ), 
RL4_SULIN   (C3NHA8    ), RL4_SULIY   (C3NEE4    ), RL4_SULTO   (Q975I2    ), 
RL4_TETTS   (P0DJ55    ), RL4_THEAC   (Q9HIR0    ), RL4_THEGJ   (C5A285    ), 
RL4_THEKO   (Q5JDI0    ), RL4_THEON   (B6YSL4    ), RL4_THESM   (C6A160    ), 
RL4_THEVO   (Q97BX6    ), RL4_TRYBB   (P49669    ), RL4_URECA   (P49165    )
» more

UniProtKB/Swiss-Prot
False negative sequences
2 sequences

RL4_HALWD   (Q18GF0    ), RL4_METB6   (A7I5P0    )

		
UniProtKB/Swiss-Prot
'Partial' sequences
2 sequences

RL4_PIG     (Q29187    ), RL4_XENTR   (P14117    )

		
PDB
[Detailed view]
235 PDB

1FFK; 1JJ2; 1K73; 1K8A; 1K9M; 1KC8; 1KD1; 1KQS; 1M1K; 1M90; 1ML5; 1N8R; 1NJI; 1Q7Y; 1Q81; 1Q82; 1Q86; 1QVF; 1QVG; 1S72; 1VQ4; 1VQ5; 1VQ6; 1VQ7; 1VQ8; 1VQ9; 1VQK; 1VQL; 1VQM; 1VQN; 1VQO; 1VQP; 1W2B; 1YHQ; 1YI2; 1YIJ; 1YIT; 1YJ9; 1YJN; 1YJW; 2OTJ; 2OTL; 2QA4; 2QEX; 2WW9; 2WWA; 2WWB; 3CC2; 3CC4; 3CC7; 3CCE; 3CCJ; 3CCL; 3CCM; 3CCQ; 3CCR; 3CCS; 3CCU; 3CCV; 3CD6; 3CMA; 3CME; 3CPW; 3CXC; 3G4S; 3G6E; 3G71; 3I55; 3I56; 3J6X; 3J6Y; 3J77; 3J78; 3JCT; 3OW2; 4ADX; 4U3M; 4U3N; 4U3U; 4U4N; 4U4O; 4U4Q; 4U4R; 4U4U; 4U4Y; 4U4Z; 4U50; 4U51; 4U52; 4U53; 4U55; 4U56; 4U6F; 4UG0; 4V42; 4V4B; 4V4N; 4V4R; 4V4S; 4V4T; 4V5Z; 4V6I; 4V6U; 4V6W; 4V6X; 4V7F; 4V7R; 4V88; 4V8P; 4V8T; 4V8Y; 4V8Z; 4V91; 4V9F; 5A8L; 5AJ0; 5APN; 5APO; 5DAT; 5DC3; 5DGE; 5DGF; 5DGV; 5FCI; 5FCJ; 5FL8; 5GAK; 5H4P; 5I4L; 5JCS; 5JUO; 5JUP; 5JUS; 5JUT; 5JUU; 5LKS; 5LYB; 5M1J; 5MC6; 5MEI; 5NDG; 5NDV; 5NDW; 5OBM; 5ON6; 5T2C; 5T62; 5T6R; 5TBW; 5TGA; 5TGM; 5Z3G; 6C0F; 6CB1; 6EK0; 6ELZ; 6EM1; 6EM3; 6EM4; 6EM5; 6FT6; 6GQ1; 6GQB; 6GQV; 6HD7; 6HHQ; 6I7O; 6IP5; 6IP6; 6IP8; 6LQM; 6LSR; 6LSS; 6LU8; 6M62; 6N8J; 6N8K; 6N8L; 6N8M; 6N8N; 6N8O; 6OIG; 6OLE; 6OLF; 6OLG; 6OLI; 6OLZ; 6OM0; 6OM7; 6Q8Y; 6QIK; 6QT0; 6QTZ; 6QZP; 6R84; 6R86; 6R87; 6RI5; 6RZZ; 6S05; 6S47; 6SKF; 6SKG; 6SNT; 6SV4; 6SWA; 6T4Q; 6T7I; 6T7T; 6T83; 6TB3; 6TH6; 6TNU; 6W6L; 6WOO; 6XA1; 6Y0G; 6Y2L; 6Y57; 6Y6X; 6YLG; 6YLH; 6YLX; 6YLY; 6Z6J; 6Z6K; 6Z6L; 6Z6M; 6Z6N; 6ZM7; 6ZME; 6ZMI; 6ZMO; 7BT6; 7BTB
» more

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission