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PROSITE entry PS00939


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PURL: https://purl.expasy.org/prosite/signature/PS00939

Direct ScanProsite submission
General information about the entry

Entry name [info] RIBOSOMAL_L1E
Accession [info] PS00939
Entry type [info] PATTERN
Date [info] 01-JUN-1994 CREATED;
01-DEC-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00724

Name and characterization of the entry

Description [info] Ribosomal protein L1e signature.
Pattern [info] 
[NP]-x(3)-[KRM]-x(2)-A-[LIVTK]-x-[SA]-[AC]-[LIV]-x-[ALCM]-[STL]-[SGAKTI]-
x(7)-[RK]-[GS]-H.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 68 in 68 different sequences
Number of true positive hits 68 in 68 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 2
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 97.14 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 68 sequences 

RL4A_ARATH  (Q9SF40), RL4A_SCHPO  (P35679), RL4A_XENLA  (P08429), 

RL4A_YEAST  (P10664), RL4B_ARATH  (P49691), RL4B_CANAL  (A0A1D8PFV1), 
RL4B_SCHPO  (Q9P784), RL4B_XENLA  (P02385), RL4B_YEAST  (P49626), 
RL4_AERPE   (Q9YFM1), RL4_ARCFU   (O28355), RL4_BOVIN   (Q58DW0), 
RL4_CAEEL   (O02056), RL4_CANLF   (Q28346), RL4_DICDI   (Q54Z69), 
RL4_DROME   (P09180), RL4_ENTH1   (O15594), RL4_HALLT   (B9LSS6), 
RL4_HALMA   (P12735), RL4_HALS3   (B0R657), RL4_HALSA   (Q9HPD3), 
RL4_HUMAN   (P36578), RL4_MACFA   (Q4R5P9), RL4_META3   (A6UV67), 
RL4_METAC   (Q8TRU6), RL4_METBU   (Q12ZV0), RL4_METHJ   (Q2FU92), 
RL4_METJA   (P54015), RL4_METKA   (Q8TY91), RL4_METM5   (A4FVY1), 
RL4_METM6   (A9A9B7), RL4_METM7   (A6VHD3), RL4_METMA   (Q8PV49), 
RL4_METMJ   (A3CSZ8), RL4_METMP   (P60846), RL4_METS3   (A5UL88), 
RL4_METST   (Q2NFV7), RL4_METTH   (O26111), RL4_METTP   (A0B9W9), 
RL4_METVS   (A6UQJ1), RL4_MOUSE   (Q9D8E6), RL4_NANEQ   (P60847), 
RL4_NATPD   (Q3IMY7), RL4_PONAB   (Q5RCR3), RL4_PRUAR   (Q9XF97), 
RL4_PYRAB   (Q9V1T6), RL4_PYRAE   (Q8ZW51), RL4_PYRFU   (Q8TZZ9), 
RL4_PYRHO   (O59420), RL4_RABIT   (G1SVW5), RL4_RAT (P50878), 
RL4_SACI1   (C3NHA8), RL4_SACI2   (C3MQ60), RL4_SACI3   (C3N5S8), 
RL4_SACI4   (C3MVH9), RL4_SACI6   (C4KHF7), RL4_SACI7   (C3NEE4), 
RL4_SACS2   (Q9UXA6), RL4_SULTO   (Q975I2), RL4_TETTS   (P0DJ55), 
RL4_THEAC   (Q9HIR0), RL4_THEGJ   (C5A285), RL4_THEKO   (Q5JDI0), 
RL4_THEON   (B6YSL4), RL4_THESM   (C6A160), RL4_THEVO   (Q97BX6), 
RL4_TRYBB   (P49669), RL4_URECA   (P49165)
» more

UniProtKB/Swiss-Prot
False negative sequences		 2 sequences 

RL4_HALWD   (Q18GF0), RL4_METB6   (A7I5P0)


				
	

	

		UniProtKB/Swiss-Prot
'Partial' sequences		
		
			2 sequences
			


			
RL4_PIG (Q29187), RL4_XENTR   (P14117)


				
	

	

		PDB
[Detailed view]		
		
			490 PDB
			


			pdb_00001ffk; pdb_00001jj2; pdb_00001k73; pdb_00001k8a; pdb_00001k9m; pdb_00001kc8; pdb_00001kd1; pdb_00001kqs; pdb_00001m1k; pdb_00001m90; pdb_00001ml5; pdb_00001n8r; 
			
				pdb_00001nji; pdb_00001q7y; pdb_00001q81; pdb_00001q82; pdb_00001q86; pdb_00001qvf; pdb_00001qvg; pdb_00001s72; pdb_00001vq4; pdb_00001vq5; pdb_00001vq6; pdb_00001vq7; 
				pdb_00001vq8; pdb_00001vq9; pdb_00001vqk; pdb_00001vql; pdb_00001vqm; pdb_00001vqn; pdb_00001vqo; pdb_00001vqp; pdb_00001w2b; pdb_00001yhq; pdb_00001yi2; pdb_00001yij; 
				pdb_00001yit; pdb_00001yj9; pdb_00001yjn; pdb_00001yjw; pdb_00002otj; pdb_00002otl; pdb_00002qa4; pdb_00002qex; pdb_00002ww9; pdb_00002wwa; pdb_00002wwb; pdb_00003cc2; 
				pdb_00003cc4; pdb_00003cc7; pdb_00003cce; pdb_00003ccj; pdb_00003ccl; pdb_00003ccm; pdb_00003ccq; pdb_00003ccr; pdb_00003ccs; pdb_00003ccu; pdb_00003ccv; pdb_00003cd6; 
				pdb_00003cma; pdb_00003cme; pdb_00003cpw; pdb_00003cxc; pdb_00003g4s; pdb_00003g6e; pdb_00003g71; pdb_00003i55; pdb_00003i56; pdb_00003j6x; pdb_00003j6y; pdb_00003j77; 
				pdb_00003j78; pdb_00003jag; pdb_00003jah; pdb_00003jai; pdb_00003jct; pdb_00003ow2; pdb_00004adx; pdb_00004u3m; pdb_00004u3n; pdb_00004u3u; pdb_00004u4n; pdb_00004u4o; 
				pdb_00004u4q; pdb_00004u4r; pdb_00004u4u; pdb_00004u4y; pdb_00004u4z; pdb_00004u50; pdb_00004u51; pdb_00004u52; pdb_00004u53; pdb_00004u55; pdb_00004u56; pdb_00004u6f; 
				pdb_00004ug0; pdb_00004v42; pdb_00004v4b; pdb_00004v4n; pdb_00004v4r; pdb_00004v4s; pdb_00004v4t; pdb_00004v5z; pdb_00004v6i; pdb_00004v6u; pdb_00004v6w; pdb_00004v6x; 
				pdb_00004v7f; pdb_00004v7r; pdb_00004v88; pdb_00004v8p; pdb_00004v8t; pdb_00004v8y; pdb_00004v8z; pdb_00004v91; pdb_00004v9f; pdb_00005a8l; pdb_00005aj0; pdb_00005apn; 
				pdb_00005apo; pdb_00005dat; pdb_00005dc3; pdb_00005dge; pdb_00005dgf; pdb_00005dgv; pdb_00005fci; pdb_00005fcj; pdb_00005gak; pdb_00005h4p; pdb_00005i4l; pdb_00005jcs; 
				pdb_00005juo; pdb_00005jup; pdb_00005jus; pdb_00005jut; pdb_00005juu; pdb_00005lks; pdb_00005lyb; pdb_00005lzs; pdb_00005lzt; pdb_00005lzu; pdb_00005lzv; pdb_00005lzw; 
				pdb_00005lzz; pdb_00005m1j; pdb_00005mc6; pdb_00005mei; pdb_00005ndg; pdb_00005ndv; pdb_00005ndw; pdb_00005obm; pdb_00005on6; pdb_00005t2c; pdb_00005t62; pdb_00005t6r; 
				pdb_00005tbw; pdb_00005tga; pdb_00005tgm; pdb_00005z3g; pdb_00006c0f; pdb_00006cb1; pdb_00006d90; pdb_00006d9j; pdb_00006elz; pdb_00006em1; pdb_00006em3; pdb_00006em4; 
				pdb_00006em5; pdb_00006ft6; pdb_00006ftg; pdb_00006fti; pdb_00006ftj; pdb_00006gq1; pdb_00006gqb; pdb_00006gqv; pdb_00006hd7; pdb_00006hhq; pdb_00006i7o; pdb_00006ip5; 
				pdb_00006ip6; pdb_00006ip8; pdb_00006lqm; pdb_00006lsr; pdb_00006lss; pdb_00006lu8; pdb_00006m62; pdb_00006mtb; pdb_00006mtc; pdb_00006mtd; pdb_00006n8j; pdb_00006n8k; 
				pdb_00006n8l; pdb_00006n8m; pdb_00006n8n; pdb_00006n8o; pdb_00006oig; pdb_00006ole; pdb_00006olf; pdb_00006olg; pdb_00006oli; pdb_00006olz; pdb_00006om0; pdb_00006om7; 
				pdb_00006p5i; pdb_00006p5j; pdb_00006p5k; pdb_00006p5n; pdb_00006q8y; pdb_00006qik; pdb_00006qt0; pdb_00006qtz; pdb_00006qzp; pdb_00006r5q; pdb_00006r6g; pdb_00006r6p; 
				pdb_00006r7q; pdb_00006r84; pdb_00006r86; pdb_00006r87; pdb_00006ri5; pdb_00006rzz; pdb_00006s05; pdb_00006s47; pdb_00006skf; pdb_00006skg; pdb_00006snt; pdb_00006sv4; 
				pdb_00006swa; pdb_00006t4q; pdb_00006t7i; pdb_00006t7t; pdb_00006t83; pdb_00006tb3; pdb_00006th6; pdb_00006tnu; pdb_00006w6l; pdb_00006woo; pdb_00006xa1; pdb_00006xu6; 
				pdb_00006xu7; pdb_00006xu8; pdb_00006y0g; pdb_00006y2l; pdb_00006y57; pdb_00006y6x; pdb_00006ylg; pdb_00006ylh; pdb_00006ylx; pdb_00006yly; pdb_00006z6j; pdb_00006z6k; 
				pdb_00006z6l; pdb_00006z6m; pdb_00006z6n; pdb_00006zm7; pdb_00006zme; pdb_00006zmi; pdb_00006zmo; pdb_00006zvk; pdb_00007a01; pdb_00007azy; pdb_00007b7d; pdb_00007bhp; 
				pdb_00007bt6; pdb_00007btb; pdb_00007cpu; pdb_00007cpv; pdb_00007f5s; pdb_00007ls1; pdb_00007ls2; pdb_00007mdz; pdb_00007mpi; pdb_00007mpj; pdb_00007n8b; pdb_00007nac; 
				pdb_00007nfx; pdb_00007nrc; pdb_00007nrd; pdb_00007nwg; pdb_00007nwh; pdb_00007o7y; pdb_00007o7z; pdb_00007o80; pdb_00007o81; pdb_00007obr; pdb_00007of1; pdb_00007oh3; 
				pdb_00007ohp; pdb_00007ohq; pdb_00007ohr; pdb_00007ohs; pdb_00007oht; pdb_00007ohu; pdb_00007ohv; pdb_00007ohw; pdb_00007ohx; pdb_00007ohy; pdb_00007ow7; pdb_00007oyc; 
				pdb_00007oyd; pdb_00007pzy; pdb_00007q08; pdb_00007q0f; pdb_00007q0p; pdb_00007q0r; pdb_00007qgg; pdb_00007qvp; pdb_00007qwq; pdb_00007qwr; pdb_00007qws; pdb_00007r7a; 
				pdb_00007tm3; pdb_00007tut; pdb_00007u0h; pdb_00007ug6; pdb_00007uoo; pdb_00007uqb; pdb_00007uqz; pdb_00007v08; pdb_00007xnx; pdb_00007xny; pdb_00007z34; pdb_00007zjw; 
				pdb_00007zjx; pdb_00007zpq; pdb_00007zrs; pdb_00007zs5; pdb_00007zuw; pdb_00007zux; pdb_00007zw0; pdb_00008a3d; pdb_00008aaf; pdb_00008agt; pdb_00008agu; pdb_00008agv; 
				pdb_00008agw; pdb_00008agx; pdb_00008agz; pdb_00008b5l; pdb_00008b6c; pdb_00008bhf; pdb_00008bip; pdb_00008bjq; pdb_00008bn3; pdb_00008bqd; pdb_00008bqx; pdb_00008btk; 
				pdb_00008c3a; pdb_00008ccs; pdb_00008cdl; pdb_00008cdr; pdb_00008ceh; pdb_00008cf5; pdb_00008cg8; pdb_00008cgn; pdb_00008civ; pdb_00008cku; pdb_00008cmj; pdb_00008e5t; 
				pdb_00008esq; pdb_00008esr; pdb_00008etc; pdb_00008etg; pdb_00008eth; pdb_00008eti; pdb_00008etj; pdb_00008eug; pdb_00008eui; pdb_00008eup; pdb_00008euy; pdb_00008ev3; 
				pdb_00008fkp; pdb_00008fkq; pdb_00008fkr; pdb_00008fks; pdb_00008fkt; pdb_00008fku; pdb_00008fkv; pdb_00008fkw; pdb_00008fkx; pdb_00008fky; pdb_00008fkz; pdb_00008fl0; 
				pdb_00008fl2; pdb_00008fl3; pdb_00008fl4; pdb_00008fl6; pdb_00008fl7; pdb_00008fl9; pdb_00008fla; pdb_00008flb; pdb_00008flc; pdb_00008fld; pdb_00008fle; pdb_00008flf; 
				pdb_00008g5y; pdb_00008g5z; pdb_00008g60; pdb_00008g61; pdb_00008g6j; pdb_00008glp; pdb_00008hfr; pdb_00008idt; pdb_00008idy; pdb_00008ie3; pdb_00008ifd; pdb_00008ife; 
				pdb_00008ine; pdb_00008inf; pdb_00008ink; pdb_00008ipd; pdb_00008ipx; pdb_00008ipy; pdb_00008ir1; pdb_00008ir3; pdb_00008jdj; pdb_00008jdk; pdb_00008jdl; pdb_00008jdm; 
				pdb_00008k2c; pdb_00008k2d; pdb_00008k82; pdb_00008ogj; pdb_00008oh6; pdb_00008ohd; pdb_00008oi5; pdb_00008oj0; pdb_00008oj3; pdb_00008oj5; pdb_00008oj8; pdb_00008p2k; 
				pdb_00008p4v; pdb_00008p8m; pdb_00008p8n; pdb_00008p8u; pdb_00008p9a; pdb_00008pfr; pdb_00008qfd; pdb_00008qoi; pdb_00008qyx; pdb_00008rjb; pdb_00008rjc; pdb_00008rjd; 
				pdb_00008rl2; pdb_00008scb; pdb_00008t2x; pdb_00008t2y; pdb_00008t2z; pdb_00008t30; pdb_00008t3a; pdb_00008t3b; pdb_00008t3c; pdb_00008t3d; pdb_00008t3e; pdb_00008t3f; 
				pdb_00008ukb; pdb_00008ut0; pdb_00008uti; pdb_00008v83; pdb_00008v84; pdb_00008v87; pdb_00008vft; pdb_00008xsx; pdb_00008xsy; pdb_00008xsz; pdb_00008xu8; pdb_00008y0u; 
				pdb_00008y0w; pdb_00008y0x; pdb_00008yld; pdb_00008ylr; pdb_00008yoo; pdb_00008yop; pdb_00008z70; pdb_00008z71; pdb_00009axt; pdb_00009axu; pdb_00009axv; pdb_00009bh5; 
				pdb_00009c3h; pdb_00009cai; pdb_00009f1b; pdb_00009f1c; pdb_00009f1d; pdb_00009f9s; pdb_00009fpz; pdb_00009fq0; pdb_00009g8m; pdb_00009gmo
			
			

			» more