PROSITE entry PS00942

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission

General information about the entry

Entry name [info]	GLPT
Accession [info]	PS00942
Entry type [info]	PATTERN
Date [info]	01-JUN-1994 CREATED; 01-JUL-1999 DATA UPDATE; 08-NOV-2023 INFO UPDATE.
PROSITE Doc. [info]	PDOC00726

Name and characterization of the entry

Description [info]	glpT family of transporters signature.
Pattern [info]	[QEK]-[RF]-G-x(3)-[GSA]-[LIVF]-[WL]-[NS]-x-[SA]-[HM]-N-[LIV]-[GA]-G.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_05 which contains 570'420 sequence entries.

Total number of hits	14 in 14 different sequences
Number of true positive hits	14 in 14 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	1
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	93.33 %

Comments [info]

Taxonomic range [info]	Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info]	1
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences

14 sequences

G6PT1_HUMAN (O43826), GLPT_BACSU  (P37948), GLPT_ECOLI  (P08194),

GLPT_HAEIN  (P96335), PGTP_SALTY  (P12681), UHPC_ECOLI  (P09836), 
UHPC_SALTY  (P27669), UHPT_CHLMU  (Q9PJJ8), UHPT_CHLPN  (Q9Z7N9), 
UHPT_CHLTR  (O84548), UHPT_ECO57  (P0AGC1), UHPT_ECOLI  (P0AGC0), 
UHPT_SALTY  (P27670), UHPT_SHIFL  (P0AGC2)

» more

Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
[Clustal format, color, condensed view] [Clustal format, color]
[Clustal format, plain text] [Fasta format]
Retrieve the sequence logo from the alignment

UniProtKB/Swiss-Prot
False negative sequences

1 sequence

G6PT2_HUMAN (P57057)

PDB
[Detailed view]

1 PDB

1PW4