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Entry: PS00982 |
Entry name [info] | PHYTOENE_DH |
Accession [info] | PS00982 |
Entry type [info] | PATTERN |
Date [info] |
01-JUN-1994 CREATED;
01-NOV-1997 DATA UPDATE; 10-FEB-2021 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00755 |
Description [info] | Bacterial-type phytoene dehydrogenase signature. |
Pattern [info] |
[NG]-x-[FYWV]-[LIVMF]-x-G-[AGC]-[GS]-[TA]-[HQT]-P-G-[STAV]-G-[LIVM]- x(5)-[GS]. |
Total number of hits | 14 in 14 different sequences |
Number of true positive hits | 14 in 14 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 11 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 56.00 % |
Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
UniProtKB/Swiss-Prot True positive sequences |
14 sequences
CRTD_RHOCB (P17059 ), CRTD_RHOS4 (Q01671 ), CRTI_CERNC (P48537 ), CRTI_MYXXA (Q02861 ), CRTI_NEUCR (P21334 ), CRTI_PANAN (P21685 ), CRTI_PARSN (P54978 ), CRTI_PHYB8 (P54982 ), CRTI_PSEVU (P22871 ), CRTI_RHOCB (P17054 ), CRTI_RHOS4 (P54980 ), CRTI_STRGR (P54981 ), CRTJ_MYXXA (P54979 ), CRTN_METSP (Q4VKV1 )» more
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UniProtKB/Swiss-Prot False negative sequences |
11 sequences
CRTN_STAA3 (Q2FDU6 ), CRTN_STAA8 (Q2FV60 ), CRTN_STAAB (Q2YWE8 ), CRTN_STAAC (Q5HCY9 ), CRTN_STAAE (O07855 ), CRTN_STAAM (Q99R76 ), CRTN_STAAN (Q7A3E2 ), CRTN_STAAR (Q6GDN7 ), CRTN_STAAS (Q6G6B3 ), CRTN_STAAW (Q8NUQ6 ), CRTN_STAHJ (Q4L975 )» more |
PDB [Detailed view] |
1 PDB
4DGK |