 |
|
| Entry: PS00982 |
General information about the entry
| Entry name [info] | PHYTOENE_DH |
| Accession [info] | PS00982 |
| Entry type [info] | PATTERN |
| Date [info] |
01-JUN-1994 CREATED;
01-NOV-1997 DATA UPDATE; 02-JUN-2021 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00755 |
Name and characterization of the entry
| Description [info] | Bacterial-type phytoene dehydrogenase signature. |
| Pattern [info] |
[NG]-x-[FYWV]-[LIVMF]-x-G-[AGC]-[GS]-[TA]-[HQT]-P-G-[STAV]-G-[LIVM]- x(5)-[GS]. |
Numerical results [info]
| Total number of hits | 14 in 14 different sequences |
| Number of true positive hits | 14 in 14 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 11 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 56.00 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
14 sequences
CRTD_RHOCB (P17059 ), CRTD_RHOS4 (Q01671 ), CRTI_CERNC (P48537 ), CRTI_MYXXA (Q02861 ), CRTI_NEUCR (P21334 ), CRTI_PANAN (P21685 ), CRTI_PARSN (P54978 ), CRTI_PHYB8 (P54982 ), CRTI_PSEVU (P22871 ), CRTI_RHOCB (P17054 ), CRTI_RHOS4 (P54980 ), CRTI_STRGR (P54981 ), CRTJ_MYXXA (P54979 ), CRTN_METSP (Q4VKV1 )» more
|
| UniProtKB/Swiss-Prot False negative sequences |
11 sequences
CRTN_STAA3 (Q2FDU6 ), CRTN_STAA8 (Q2FV60 ), CRTN_STAAB (Q2YWE8 ), CRTN_STAAC (Q5HCY9 ), CRTN_STAAE (O07855 ), CRTN_STAAM (Q99R76 ), CRTN_STAAN (Q7A3E2 ), CRTN_STAAR (Q6GDN7 ), CRTN_STAAS (Q6G6B3 ), CRTN_STAAW (Q8NUQ6 ), CRTN_STAHJ (Q4L975 )» more |
| PDB [Detailed view] |
1 PDB
4DGK |
View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission