PROSITE entry PS01013

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General information about the entry

Entry name [info]	OSBP
Accession [info]	PS01013
Entry type [info]	PATTERN
Date [info]	01-JUN-1994 CREATED; 01-APR-2006 DATA UPDATE; 03-MAY-2023 INFO UPDATE.
PROSITE Doc. [info]	PDOC00774

Name and characterization of the entry

Description [info]	Oxysterol-binding protein family signature.
Pattern [info]	E-[KQ]-x-[SC]-H-[HR]-[PG]-[PL]-x(1,2)-[STACFI]-[ACGY].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_02 which contains 569'516 sequence entries.

Total number of hits	51 in 51 different sequences
Number of true positive hits	51 in 51 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	16
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	76.12 %

Comments [info]

Taxonomic range [info]	Eukaryotes
Maximum number of repetitions [info]	1
Version [info]	2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences

51 sequences

EFUK_HORCR  (A0A2Z4HQ03), HES1_YEAST  (P35843    ), KES1_SCHPO  (O74178    ),

KES1_USTMA  (P0C199    ), KES1_YEAST  (P35844    ), OBPAL_CANAL (Q9UW21    ), 
OBPA_CANAL  (Q9UW25    ), ORP3A_ARATH (Q9LZM1    ), ORP3B_ARATH (Q9SR33    ), 
ORP3C_ARATH (Q93Y40    ), ORP4C_ARATH (Q9LVD4    ), OSB10_HUMAN (Q9BXB5    ), 
OSB10_MOUSE (S4R1M9    ), OSB11_DICDI (Q54ID7    ), OSB11_HUMAN (Q9BXB4    ), 
OSB11_MOUSE (Q8CI95    ), OSB12_DICDI (Q54EF5    ), OSB4_DICDI  (Q86KG4    ), 
OSB6_DICDI  (Q86HV4    ), OSBL1_HUMAN (Q9BXW6    ), OSBL1_MOUSE (Q91XL9    ), 
OSBL1_RAT   (Q8K4M9    ), OSBL2_HUMAN (Q9H1P3    ), OSBL2_MOUSE (Q8BX94    ), 
OSBL3_HUMAN (Q9H4L5    ), OSBL3_MOUSE (Q9DBS9    ), OSBL5_HUMAN (Q9H0X9    ), 
OSBL5_MOUSE (Q9ER64    ), OSBL6_HUMAN (Q9BZF3    ), OSBL6_MOUSE (Q8BXR9    ), 
OSBL7_HUMAN (Q9BZF2    ), OSBL8_HUMAN (Q9BZF1    ), OSBL8_MOUSE (B9EJ86    ), 
OSBL9_HUMAN (Q96SU4    ), OSBL9_MOUSE (A2A8Z1    ), OSBL9_PONAB (Q5R9W4    ), 
OSBL9_XENTR (Q0IJ05    ), OSBP1_HUMAN (P22059    ), OSBP1_MOUSE (Q3B7Z2    ), 
OSBP1_RABIT (P16258    ), OSBP2_HUMAN (Q969R2    ), OSBP2_MOUSE (Q5QNQ6    ), 
OSH1_YEAST  (P35845    ), OSH2_YEAST  (Q12451    ), OSH3_YEAST  (P38713    ), 
OSH6_YEAST  (Q02201    ), OSH7_YEAST  (P38755    ), YB35_SCHPO  (O14340    ), 
YEH1_SCHPO  (O13944    ), YGV7_SCHPO  (O43021    ), YJX1_SCHPO  (Q9UUA1    )

» more

Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
[Clustal format, color, condensed view] [Clustal format, color]
[Clustal format, plain text] [Fasta format]
Retrieve the sequence logo from the alignment

UniProtKB/Swiss-Prot
False negative sequences

16 sequences

ORP1A_ARATH (O80866    ), ORP1B_ARATH (Q8S8P9    ), ORP1C_ARATH (Q8L751    ),

ORP1D_ARATH (Q9SAF0    ), ORP2A_ARATH (Q940Y1    ), ORP2B_ARATH (Q9SU36    ), 
ORP4A_ARATH (Q9SVZ9    ), ORP4B_ARATH (Q9SW00    ), OSB10_DICDI (Q54NM4    ), 
OSB1_DICDI  (Q8MPQ7    ), OSB2_DICDI  (Q55CR3    ), OSB3_DICDI  (Q55CR2    ), 
OSB5_DICDI  (Q86HL8    ), OSB7_DICDI  (Q54RM1    ), OSB8_DICDI  (Q54QP6    ), 
OSB9_DICDI  (Q54PS9    )

» more

PDB
[Detailed view]

22 PDB

1ZHT; 1ZHW; 1ZHX; 1ZHY; 1ZHZ; 1ZI7; 3SPW; 4B2Z; 4F4B; 4FES; 4IC4; 4INQ; 4JCH; 4PH7; 5ZM5; 5ZM6; 5ZM7; 5ZM8; 7CYZ; 7DEI; 7DEJ; 7V62
» more