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PROSITE entry PS01014


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General information about the entry

Entry name [info] NUSG
Accession [info] PS01014
Entry type [info] PATTERN
Date [info] 01-JUN-1994 CREATED;
01-NOV-1997 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00775

Name and characterization of the entry

Description [info] Transcription termination factor nusG signature.
Pattern [info]
[LIVM]-F-G-[KRW]-x-T-P-[IV]-x-[LIVM].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_03 which contains 571'609 sequence entries.


Total number of hits 58 in 58 different sequences
Number of true positive hits 58 in 58 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 10
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 85.29 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
58 sequences

NUSG_AQUAE  (O67757), NUSG_BACSU  (Q06795), NUSG_BORBU  (O51355), 
NUSG_BUCAI  (P57151), NUSG_BUCAP  (Q8KA65), NUSG_BUCBP  (Q89B15), 
NUSG_CAMJE  (Q9PI36), NUSG_DEIRA  (Q9RSS6), NUSG_ECO57  (P0AFG1), 
NUSG_ECOL6  (P0AA01), NUSG_ECOLI  (P0AFG0), NUSG_HAEIN  (P43916), 
NUSG_HALH5  (Q9KGE7), NUSG_HELPJ  (Q9ZK20), NUSG_HELPY  (P55976), 
NUSG_LACLA  (Q9CDV7), NUSG_LIBAS  (P36262), NUSG_MYCBO  (P65590), 
NUSG_MYCLE  (Q9CBK0), NUSG_MYCTO  (P9WIU8), NUSG_MYCTU  (P9WIU9), 
NUSG_NEIMA  (P65591), NUSG_NEIMB  (P65592), NUSG_PASMU  (Q9CK84), 
NUSG_PSEAE  (Q9HWC4), NUSG_RICBR  (Q1RHC5), NUSG_RICCN  (Q92J91), 
NUSG_RICFE  (Q4UKC9), NUSG_RICPR  (P50056), NUSG_RICTY  (Q68XN3), 
NUSG_SALTI  (P0AA03), NUSG_SALTY  (P0AA02), NUSG_SHIFL  (P0AFG2), 
NUSG_STAA8  (Q2G0P2), NUSG_STAAC  (Q5HID9), NUSG_STAAE  (P0C1S3), 
NUSG_STAAM  (P0A095), NUSG_STAAN  (P0A096), NUSG_STAAR  (Q6GJD2), 
NUSG_STAAS  (Q6GBV1), NUSG_STAAW  (P0A097), NUSG_STACT  (P36264), 
NUSG_STAEQ  (Q5HRL6), NUSG_STAES  (Q8CQ85), NUSG_STRCO  (P36266), 
NUSG_STRGB  (P52852), NUSG_STRGR  (P36260), NUSG_STRVG  (P27309), 
NUSG_SYNY3  (P36265), NUSG_THEMA  (P29397), NUSG_THET8  (P35872), 
NUSG_TREPA  (O83264), NUSG_VIBCH  (Q9KV35), NUSG_VIBPA  (Q87KP9), 
NUSG_VIBVU  (Q8DD25), NUSG_XYLFA  (Q9PA81), NUSG_XYLFT  (Q87A27), 
NUSG_YERPE  (Q8ZAP0)
» more

UniProtKB/Swiss-Prot
False negative sequences
10 sequences

NUSG_CHLMU  (Q9PK75), NUSG_CHLPN  (Q9Z9A5), NUSG_CHLTR  (O84322), 
NUSG_MYCGE  (P47300), NUSG_MYCPN  (P75049), NUSG_STRP1  (P68893), 
NUSG_STRP3  (P0DC78), NUSG_STRP6  (Q5XE43), NUSG_STRP8  (P68895), 
NUSG_STRPQ  (P0DC79)
» more

PDB
[Detailed view]
67 PDB

1M1G; 1M1H; 1NPP; 1NPR; 1NZ9; 2JVV; 2KVQ; 2LQ8; 2MI6; 2XHC; 5MS0; 5TBZ; 6C6U; 6DUQ; 6GOV; 6TQN; 6TQO; 6VU3; 6VYQ; 6VYR; 6VYS; 6VYT; 6VYU; 6VYW; 6VYX; 6VYY; 6VYZ; 6VZ2; 6VZ5; 6X6T; 6X7F; 6X7K; 6X9Q; 6XAV; 6XDQ; 6XDR; 6XE0; 6XGF; 6XII; 6XIJ; 6Z9P; 6Z9Q; 6Z9R; 6ZTJ; 6ZTL; 6ZTN; 7PY0; 7PY1; 7PY5; 7PY6; 7PY7; 7PY8; 8E3F; 8E5K; 8E5O; 8E6X; 8E6Z; 8E74; 8E79; 8E82; 8EHQ; 8EJ3; 8EOE; 8EOF; 8EOS; 8EOT; 8EXY
» more