PROSITE entry PS01014
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General information about the entry
| Entry name [info] | NUSG |
| Accession [info] | PS01014 |
| Entry type [info] | PATTERN |
| Date [info] |
01-JUN-1994 CREATED;
01-NOV-1997 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00775 |
Name and characterization of the entry
| Description [info] | Transcription termination factor nusG signature. |
| Pattern [info] |
[LIVM]-F-G-[KRW]-x-T-P-[IV]-x-[LIVM]. |
Numerical results [info]
| Total number of hits | 58 in 58 different sequences |
| Number of true positive hits | 58 in 58 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 10 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 85.29 % |
Comments [info]
| Taxonomic range [info] | Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
58 sequences
NUSG_AQUAE (O67757), NUSG_BACSU (Q06795), NUSG_BORBU (O51355), NUSG_BUCAI (P57151), NUSG_BUCAP (Q8KA65), NUSG_BUCBP (Q89B15), NUSG_CAMJE (Q9PI36), NUSG_DEIRA (Q9RSS6), NUSG_ECO57 (P0AFG1), NUSG_ECOL6 (P0AA01), NUSG_ECOLI (P0AFG0), NUSG_HAEIN (P43916), NUSG_HALH5 (Q9KGE7), NUSG_HELPJ (Q9ZK20), NUSG_HELPY (P55976), NUSG_LACLA (Q9CDV7), NUSG_LIBAS (P36262), NUSG_MYCBO (P65590), NUSG_MYCLE (Q9CBK0), NUSG_MYCTO (P9WIU8), NUSG_MYCTU (P9WIU9), NUSG_NEIMA (P65591), NUSG_NEIMB (P65592), NUSG_PASMU (Q9CK84), NUSG_PSEAE (Q9HWC4), NUSG_RICBR (Q1RHC5), NUSG_RICCN (Q92J91), NUSG_RICFE (Q4UKC9), NUSG_RICPR (P50056), NUSG_RICTY (Q68XN3), NUSG_SALTI (P0AA03), NUSG_SALTY (P0AA02), NUSG_SHIFL (P0AFG2), NUSG_STAA8 (Q2G0P2), NUSG_STAAC (Q5HID9), NUSG_STAAE (P0C1S3), NUSG_STAAM (P0A095), NUSG_STAAN (P0A096), NUSG_STAAR (Q6GJD2), NUSG_STAAS (Q6GBV1), NUSG_STAAW (P0A097), NUSG_STACT (P36264), NUSG_STAEQ (Q5HRL6), NUSG_STAES (Q8CQ85), NUSG_STRCO (P36266), NUSG_STRGB (P52852), NUSG_STRGR (P36260), NUSG_STRVG (P27309), NUSG_SYNY3 (P36265), NUSG_THEMA (P29397), NUSG_THET8 (P35872), NUSG_TREPA (O83264), NUSG_VIBCH (Q9KV35), NUSG_VIBPA (Q87KP9), NUSG_VIBVU (Q8DD25), NUSG_XYLFA (Q9PA81), NUSG_XYLFT (Q87A27), NUSG_YERPE (Q8ZAP0)» more
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| UniProtKB/Swiss-Prot False negative sequences |
10 sequences
NUSG_CHLMU (Q9PK75), NUSG_CHLPN (Q9Z9A5), NUSG_CHLTR (O84322), NUSG_MYCGE (P47300), NUSG_MYCPN (P75049), NUSG_STRP1 (P68893), NUSG_STRP3 (P0DC78), NUSG_STRP6 (Q5XE43), NUSG_STRP8 (P68895), NUSG_STRPQ (P0DC79)» more |
| PDB [Detailed view] |
67 PDB
1M1G; 1M1H; 1NPP; 1NPR; 1NZ9; 2JVV; 2KVQ; 2LQ8; 2MI6; 2XHC; 5MS0; 5TBZ; 6C6U; 6DUQ; 6GOV; 6TQN; 6TQO; 6VU3; 6VYQ; 6VYR; 6VYS; 6VYT; 6VYU; 6VYW; 6VYX; 6VYY; 6VYZ; 6VZ2; 6VZ5; 6X6T; 6X7F; 6X7K; 6X9Q; 6XAV; 6XDQ; 6XDR; 6XE0; 6XGF; 6XII; 6XIJ; 6Z9P; 6Z9Q; 6Z9R; 6ZTJ; 6ZTL; 6ZTN; 7PY0; 7PY1; 7PY5; 7PY6; 7PY7; 7PY8; 8E3F; 8E5K; 8E5O; 8E6X; 8E6Z; 8E74; 8E79; 8E82; 8EHQ; 8EJ3; 8EOE; 8EOF; 8EOS; 8EOT; 8EXY » more |