PROSITE entry PS01022
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General information about the entry
| Entry name [info] | PTR2_1 |
| Accession [info] | PS01022 |
| Entry type [info] | PATTERN |
| Date [info] |
01-JUN-1994 CREATED;
01-NOV-1997 DATA UPDATE; 08-NOV-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00784 |
Name and characterization of the entry
| Description [info] | PTR2 family proton/oligopeptide symporters signature 1. |
| Pattern [info] |
[GA]-[GAS]-[LIVMFYWA]-[LIVM]-[GAS]-D-x-[LIVMFYWT]-[LIVMFYW]-G-x(3)-[TAV]- [IV]-x(3)-[GSTAV]-x-[LIVMF]-x(3)-[GA]. |
Numerical results [info]
| Total number of hits | 78 in 78 different sequences |
| Number of true positive hits | 78 in 78 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 39 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 66.67 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
78 sequences
DTPA_CHRVO (Q7NRM5), DTPA_CITK8 (A8AH15), DTPA_CROTZ (C9Y3M8), DTPA_ECO57 (Q8X651), DTPA_ECOL6 (Q8FH91), DTPA_ECOLI (P77304), DTPA_EDWTE (D0Z7W2), DTPA_ENT38 (A4W9W3), DTPA_ERWP6 (D2TBH1), DTPA_KLEP3 (B5XWP3), DTPA_PECCP (C6DH09), DTPA_PROMH (B4EY98), DTPA_SALTI (Q8Z6Q5), DTPA_SALTY (Q8ZPM6), DTPA_SERP5 (A8GDZ4), DTPB_ECOLI (P36837), DTPB_PHOAA (B6VMU9), DTPB_PHOLU (Q8GFA2), DTPB_SHIDS (Q32AW5), DTPB_XENBS (D3V3D1), DTPC_ECOLI (P39276), DTPD_CITK8 (A8AJB3), DTPD_CITRI (D2TNL4), DTPD_ECO57 (Q8X9D3), DTPD_ECOLI (P75742), DTPD_KLEP3 (B5XZE5), DTPD_KLEP7 (A6T6E2), DTPD_SALCH (Q57RM6), DTPD_SALPC (C0PWD2), DTPD_SALT1 (D0ZQC5), DTPD_SALTY (Q7CQY0), DTPD_SHIFL (Q83S84), DTPT_LACHE (O07380), DTPT_LACLA (P0C2U2), DTPT_LACLC (P0C2U3), DTPT_LACLM (A2RMA8), PEPT1_CAEEL (Q21219), PEPT1_DROME (P91679), PEPT2_CAEEL (Q17758), PEPT3_CAEEL (O01840), PEPT_YERP4 (A0A2R9TD79), PTR10_ARATH (Q9SK96), PTR11_ARATH (Q9SK99), PTR13_ARATH (Q9LFX9), PTR16_ARATH (Q93VV5), PTR17_ARATH (Q93Z20), PTR1_ARATH (Q9M390), PTR22_ARATH (Q8VZE2), PTR23_ARATH (Q0WSZ6), PTR24_ARATH (Q8RX67), PTR26_ARATH (Q84WG0), PTR27_ARATH (Q9SZY4), PTR28_ARATH (P0CI03), PTR2_ARATH (P46032), PTR2_CANAX (P46030), PTR2_SCHPO (Q9P380), PTR2_YEAST (P32901), PTR39_ARATH (Q9M175), PTR40_ARATH (Q9M174), PTR41_ARATH (Q9M173), PTR42_ARATH (Q9M172), PTR45_ARATH (Q9M331), PTR46_ARATH (Q9M1I2), PTR49_ARATH (Q9LYR6), PTR5_ARATH (Q9LFB8), PTR7_ARATH (Q05085), PTR9_ARATH (Q0WP01), S15A1_CANLF (Q8WMX5), S15A1_HUMAN (P46059), S15A1_MOUSE (Q9JIP7), S15A1_RABIT (P36836), S15A1_RAT (P51574), S15A2_DANRE (B0S6T2), S15A2_HUMAN (Q16348), S15A2_MOUSE (Q9ES07), S15A2_RABIT (P46029), S15A2_RAT (Q63424), YCLF_BACSU (P94408)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
39 sequences
DTPA_YERPE (Q0WEG0), DTPB_AERHH (A0KMY1), DTPB_ALIFM (B5FDK5), DTPB_EDWTE (D0ZGL2), DTPB_SALTY (Q8ZLD6), DTPB_YERE8 (A1JRI8), PTR12_ARATH (Q8VYE4), PTR14_ARATH (Q9LQL2), PTR15_ARATH (Q56XQ6), PTR18_ARATH (Q9SX20), PTR19_ARATH (Q8H157), PTR20_ARATH (Q9CAR9), PTR21_ARATH (Q8RX77), PTR25_ARATH (Q9C7U1), PTR29_ARATH (O80436), PTR30_ARATH (Q8VZR7), PTR31_ARATH (Q9SRI2), PTR32_ARATH (Q8LPL2), PTR33_ARATH (Q9LVE0), PTR34_ARATH (Q9LSF0), PTR35_ARATH (Q9LSE8), PTR36_ARATH (Q3EAQ5), PTR37_ARATH (Q9M1E2), PTR38_ARATH (Q9M1E1), PTR3_ARATH (Q9FNL7), PTR43_ARATH (Q9M171), PTR44_ARATH (Q944G5), PTR47_ARATH (Q8GXN2), PTR48_ARATH (Q9LYD5), PTR4_ARATH (Q9FNL8), PTR50_ARATH (Q9LFR1), PTR51_ARATH (Q3E9B5), PTR52_ARATH (Q3E8X3), PTR53_ARATH (Q9LV10), PTR54_ARATH (Q9FM20), PTR6_ARATH (Q9M817), S15A3_HUMAN (Q8IY34), S15A3_MOUSE (Q8BPX9), S15A3_RAT (Q924V4)» more |
| PDB [Detailed view] |
16 PDB
4OH3; 4Q65; 4W6V; 5A2N; 5A2O; 6GS1; 6GS4; 6GS7; 7NQK; 7PMW; 7PMX; 7PMY; 7PN1; 7Q0L; 7Q0M; 7ZC2 » more |