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PROSITE entry PS01023


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General information about the entry

Entry name [info] PTR2_2
Accession [info] PS01023
Entry type [info] PATTERN
Date [info] 01-JUN-1994 CREATED;
01-NOV-1997 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00784

Name and characterization of the entry

Description [info] PTR2 family proton/oligopeptide symporters signature 2.
Pattern [info] 
[FYT]-x(2)-[LMFY]-[FYV]-[LIVMFYWA]-x-[IVG]-N-[LIVMAG]-G-[GSA]-[LIMF].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_04 which contains 571'864 sequence entries.


Total number of hits 80 in 80 different sequences
Number of true positive hits 77 in 77 different sequences
Number of 'unknown' hits 0
Number of false positive hits 3 in 3 different sequences
Number of false negative sequences 49
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 96.25 %
Recall (true positives / (true positives + false negatives)) 61.11 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 77 sequences 

DTPA_CHRVO  (Q7NRM5), DTPA_CITK8  (A8AH15), DTPA_CROTZ  (C9Y3M8), 

DTPA_ECO57  (Q8X651), DTPA_ECOL6  (Q8FH91), DTPA_ECOLI  (P77304), 
DTPA_EDWTE  (D0Z7W2), DTPA_ENT38  (A4W9W3), DTPA_ERWP6  (D2TBH1), 
DTPA_KLEP3  (B5XWP3), DTPA_PECCP  (C6DH09), DTPA_PROMH  (B4EY98), 
DTPA_SALTI  (Q8Z6Q5), DTPA_SALTY  (Q8ZPM6), DTPA_SERP5  (A8GDZ4), 
DTPA_YERPE  (Q0WEG0), DTPB_AERHH  (A0KMY1), DTPB_ALIFM  (B5FDK5), 
DTPB_ECOLI  (P36837), DTPB_EDWTE  (D0ZGL2), DTPB_PHOAA  (B6VMU9), 
DTPB_PHOLU  (Q8GFA2), DTPB_SALTY  (Q8ZLD6), DTPB_SHIDS  (Q32AW5), 
DTPB_XENBS  (D3V3D1), DTPB_YERE8  (A1JRI8), DTPC_ECOLI  (P39276), 
DTPD_CITK8  (A8AJB3), DTPD_CITRI  (D2TNL4), DTPD_ECO57  (Q8X9D3), 
DTPD_ECOLI  (P75742), DTPD_KLEP3  (B5XZE5), DTPD_KLEP7  (A6T6E2), 
DTPD_SALCH  (Q57RM6), DTPD_SALPC  (C0PWD2), DTPD_SALT1  (D0ZQC5), 
DTPD_SALTY  (Q7CQY0), DTPD_SHIFL  (Q83S84), DTPT_LACHE  (O07380), 
DTPT_LACLA  (P0C2U2), DTPT_LACLC  (P0C2U3), DTPT_LACLM  (A2RMA8), 
IMQJ_ASPFN  (B8NI27), PEPT1_CAEEL (Q21219), PEPT1_DROME (P91679), 
PEPT2_CAEEL (Q17758), PEPT3_CAEEL (O01840), PEPT_YERP4  (A0A2R9TD79), 
PTR17_ARATH (Q93Z20), PTR1_ARATH  (Q9M390), PTR26_ARATH (Q84WG0), 
PTR2_ARATH  (P46032), PTR2_CANAX  (P46030), PTR2_SCHPO  (Q9P380), 
PTR2_YEAST  (P32901), PTR5_ARATH  (Q9LFB8), PTR7_ARATH  (Q05085), 
PTRA_CANAR  (A0A2H0ZJA8), PTRB_CANAR  (A0A2H0ZNJ6), PTRC_CANAR  (A0A2H0ZCS5), 
S15A1_CANLF (Q8WMX5), S15A1_HUMAN (P46059), S15A1_MOUSE (Q9JIP7), 
S15A1_RABIT (P36836), S15A1_RAT   (P51574), S15A2_HUMAN (Q16348), 
S15A2_MOUSE (Q9ES07), S15A2_RABIT (P46029), S15A2_RAT   (Q63424), 
S15A3_MOUSE (Q8BPX9), S15A3_RAT   (Q924V4), S15A4_BOVIN (A6QQL0), 
S15A4_HUMAN (Q8N697), S15A4_MOUSE (Q91W98), S15A4_RAT   (O09014), 
S15A4_XENLA (Q68F72), YCLF_BACSU  (P94408)
» more

UniProtKB/Swiss-Prot
False negative sequences		 49 sequences 

PTR10_ARATH (Q9SK96), PTR11_ARATH (Q9SK99), PTR12_ARATH (Q8VYE4), 

PTR13_ARATH (Q9LFX9), PTR14_ARATH (Q9LQL2), PTR15_ARATH (Q56XQ6), 
PTR16_ARATH (Q93VV5), PTR18_ARATH (Q9SX20), PTR19_ARATH (Q8H157), 
PTR20_ARATH (Q9CAR9), PTR21_ARATH (Q8RX77), PTR22_ARATH (Q8VZE2), 
PTR23_ARATH (Q0WSZ6), PTR24_ARATH (Q8RX67), PTR25_ARATH (Q9C7U1), 
PTR27_ARATH (Q9SZY4), PTR28_ARATH (P0CI03), PTR29_ARATH (O80436), 
PTR30_ARATH (Q8VZR7), PTR31_ARATH (Q9SRI2), PTR32_ARATH (Q8LPL2), 
PTR33_ARATH (Q9LVE0), PTR34_ARATH (Q9LSF0), PTR35_ARATH (Q9LSE8), 
PTR36_ARATH (Q3EAQ5), PTR37_ARATH (Q9M1E2), PTR38_ARATH (Q9M1E1), 
PTR39_ARATH (Q9M175), PTR3_ARATH  (Q9FNL7), PTR40_ARATH (Q9M174), 
PTR41_ARATH (Q9M173), PTR42_ARATH (Q9M172), PTR43_ARATH (Q9M171), 
PTR44_ARATH (Q944G5), PTR45_ARATH (Q9M331), PTR46_ARATH (Q9M1I2), 
PTR47_ARATH (Q8GXN2), PTR48_ARATH (Q9LYD5), PTR49_ARATH (Q9LYR6), 
PTR4_ARATH  (Q9FNL8), PTR50_ARATH (Q9LFR1), PTR51_ARATH (Q3E9B5), 
PTR52_ARATH (Q3E8X3), PTR53_ARATH (Q9LV10), PTR54_ARATH (Q9FM20), 
PTR6_ARATH  (Q9M817), PTR8_ARATH  (Q9M9V7), PTR9_ARATH  (Q0WP01), 
S15A3_HUMAN (Q8IY34)
» more

UniProtKB/Swiss-Prot
False positive sequences		 3 sequences 

NUON2_STRGG (B1W4V1), NUON_MOOTA  (Q2RJT7), PURL_THEMA  (Q9X0X3)


				
	

	

		PDB
[Detailed view]		
		
			42 PDB
			


			4OH3; 4Q65; 4W6V; 5A2N; 5A2O; 6GS1; 6GS4; 6GS7; 7NQK; 7PMW; 7PMX; 7PMY; 
			
				7PN1; 7Q0L; 7Q0M; 7ZC2; 8B17; 8B18; 8B19; 8B1A; 8B1B; 8B1C; 8B1D; 8B1E; 
				8B1F; 8B1G; 8B1H; 8B1I; 8B1J; 8B1K; 8JZR; 8JZS; 8JZU; 8JZX; 8P6A; 8QSK; 
				8QSL; 8QSM; 8QSN; 8WX3; 8WX4; 8WX5
			
			

			» more