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Entry: PS01049

General information about the entry

Entry name [info] YJEF_C_1
Accession [info] PS01049
Entry type [info] PATTERN
Date [info] 01-NOV-1995 CREATED;
01-NOV-1997 DATA UPDATE;
22-FEB-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00806

Name and characterization of the entry

Description [info] YjeF C-terminal domain signature 1.
Pattern [info] 
[SAV]-[IVW]-[LVA]-[LIV]-G-[PNS]-G-L-[GP]-x-[DENQT].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_01 which contains 569'213 sequence entries.


Total number of hits 24 in 24 different sequences
Number of true positive hits 24 in 24 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 67
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 26.37 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 24 sequences 

NNRD_BACSU  (P94368    ), NNRD_CAEBR  (A8X354    ), NNRD_CAEEL  (P32740    ), 

NNRD_DANRE  (F1Q575    ), NNRD_DROME  (Q9VVW8    ), NNRD_DROPS  (B5DHB2    ), 
NNRD_ENTFA  (Q833Y3    ), NNRD_IXOSC  (B7PBI5    ), NNRD_LACLA  (Q9CIU7    ), 
NNRD_LACPL  (F9UN92    ), NNRD_PHANO  (Q0UVK8    ), NNRD_SCHPO  (O94347    ), 
NNRD_STAA8  (Q2G2P8    ), NNRD_STRR6  (Q8DQD2    ), NNRD_STRTR  (P96051    ), 
NNRD_USTMA  (Q4P219    ), NNRD_YEAST  (P36059    ), NNR_ECOLI   (P31806    ), 
NNR_METJA   (Q58981    ), NNR_MYCLE   (P37391    ), NNR_MYCTO   (P9WF10    ), 
NNR_MYCTU   (P9WF11    ), NNR_SYNY3   (P74217    ), NNR_THEMA   (Q9X024    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 67 sequences 

NNRD1_PUCGT (E3LAQ9    ), NNRD2_PUCGT (E3L9T1    ), NNRD_AEDAE  (Q17NP0    ), 

NNRD_AJECG  (C0NFV9    ), NNRD_ANODA  (E3XDZ8    ), NNRD_ARATH  (Q94AF2    ), 
NNRD_ASPFU  (Q4X1F8    ), NNRD_BATDJ  (F4NZ38    ), NNRD_BORPE  (Q7VU32    ), 
NNRD_BOVIN  (E1BNQ4    ), NNRD_CANAL  (Q59M69    ), NNRD_CANAW  (C4YSU5    ), 
NNRD_CANLF  (E2QUI9    ), NNRD_CENSY  (A0RU82    ), NNRD_CIOIN  (F6RCC2    ), 
NNRD_COPC7  (A8N8Z0    ), NNRD_CRYNJ  (Q5K8L4    ), NNRD_DICDI  (Q54FJ9    ), 
NNRD_EMENI  (Q5B0D6    ), NNRD_ENTH1  (C4LZV8    ), NNRD_FLAPJ  (A6GXW4    ), 
NNRD_FUSV7  (C7YKN8    ), NNRD_HALTV  (D2RXF6    ), NNRD_HUMAN  (Q8IW45    ), 
NNRD_LISMO  (Q8Y6R2    ), NNRD_MACMU  (F7E727    ), NNRD_MOUSE  (Q9CZ42    ), 
NNRD_NATMM  (D3SQW0    ), NNRD_NEIG1  (Q5F8G9    ), NNRD_NEIMB  (Q9JRZ9    ), 
NNRD_NEMVE  (A7RRZ8    ), NNRD_NEUCR  (Q7SHU9    ), NNRD_NITMS  (A9A498    ), 
NNRD_PEDHC  (E0VSF4    ), NNRD_PHATC  (B7FXE8    ), NNRD_PHYPA  (A9RY03    ), 
NNRD_POLPP  (D3BMU4    ), NNRD_PONAB  (Q5R824    ), NNRD_RAT    (D4AAT7    ), 
NNRD_RHOBA  (Q7UFW7    ), NNRD_SORBI  (C5Y210    ), NNRD_VITVI  (F6HDM2    ), 
NNRD_XANCP  (Q8PBP3    ), NNR_AQUAE   (O67377    ), NNR_ARCFU   (O29407    ), 
NNR_CORGL   (Q8NSS3    ), NNR_COXBU   (Q83CM5    ), NNR_DICTD   (B8E2P6    ), 
NNR_GLOVI   (Q7NIE6    ), NNR_HELPJ   (Q9ZJM4    ), NNR_HELPY   (P56176    ), 
NNR_HYPBU   (A2BLC0    ), NNR_KORCO   (B1L3W1    ), NNR_LEIBR   (A4H7T9    ), 
NNR_LEIIN   (A4HW65    ), NNR_LEIMA   (Q4QFL5    ), NNR_METHJ   (Q2FT57    ), 
NNR_METKA   (Q8TX67    ), NNR_METTH   (O27324    ), NNR_MOOTA   (Q2RGI2    ), 
NNR_PYRAE   (Q8ZV04    ), NNR_SALRD   (Q2S580    ), NNR_THEAS   (D1BAA5    ), 
NNR_THEPD   (A1S0R2    ), NNR_THEVB   (Q8DGC3    ), NNR_THEYD   (B5YIM0    ), 
NNR_VIBCH   (Q9KMX5    )
» more

PDB
[Detailed view]		 33 PDB

1KYH; 2AX3; 2R3B; 2R3E; 3RPH; 3RPZ; 3RQ2; 3RQ5; 3RQ6; 3RQ8; 3RQH; 3RQQ; 3RQX; 3RRB; 3RRE; 3RRF; 3RRJ; 3RS8; 3RS9; 3RSF; 3RSG; 3RSQ; 3RSS; 3RT7; 3RT9; 3RTA; 3RTB; 3RTC; 3RTD; 3RTE; 3RTG; 3RU2; 3RU3
» more

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