PROSITE entry PS01062
View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission
General information about the entry
Entry name [info] | HMG_COA_LYASE |
Accession [info] | PS01062 |
Entry type [info] | PATTERN |
Date [info] |
01-NOV-1995 CREATED;
01-NOV-1995 DATA UPDATE; 03-MAY-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00813 |
Associated ProRule [info] | PRU10115 |
Name and characterization of the entry
Description [info] | Hydroxymethylglutaryl-coenzyme A lyase active site. |
Pattern [info] |
S-V-A-G-L-G-G-C-P-Y. |
Numerical results [info]
Total number of hits | 9 in 9 different sequences |
Number of true positive hits | 9 in 9 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 5 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 64.29 % |
Comments [info]
Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Site [info] | active_site at position 8 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
9 sequences
HMGCL_BOVIN (Q29448 ), HMGCL_CHICK (P35915 ), HMGCL_HUMAN (P35914 ), HMGCL_MACFA (Q8HXZ6 ), HMGCL_MOUSE (P38060 ), HMGCL_PONAB (Q5R9E1 ), HMGCL_PSEMV (P13703 ), HMGCL_RAT (P97519 ), LIUE_PSEAE (Q9I2A0 )» more
|
UniProtKB/Swiss-Prot False negative sequences |
5 sequences
HMGC2_DANRE (A8WG57 ), HMGC2_HUMAN (Q8TB92 ), HMGC2_MOUSE (Q8JZS7 ), HMGC2_RAT (D4A5C3 ), HMGCL_BACSU (O34873 )» more |
PDB [Detailed view] |
5 PDB
2CW6; 2FTP; 3MP3; 3MP4; 3MP5 |