PROSITE entry PS01066
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General information about the entry
Entry name [info] | UPP_SYNTHASE |
Accession [info] | PS01066 |
Entry type [info] | PATTERN |
Date [info] |
01-NOV-1995 CREATED;
01-DEC-2004 DATA UPDATE; 13-SEP-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00817 |
Name and characterization of the entry
Description [info] | Undecaprenyl pyrophosphate synthase family signature. |
Pattern [info] |
[DEH]-[LIVMF]-[LIVMFC]-[LIVMF]-R-[STPV]-[SGAC]-[GEN]-x(1,2)-R-x-S-x-[FY]- [LMFV]-[LIPMVT]-[YWL]. |
Numerical results [info]
Total number of hits | 220 in 220 different sequences |
Number of true positive hits | 220 in 220 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 4 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 98.21 % |
Comments [info]
Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
220 sequences
CPT1_SOLLC (C1K5M2), CPT2_SOLLC (K7WQ45), CPT3_SOLLC (K7WCI9), CPT4_SOLLC (K4D3U9), CPT5_SOLLC (K7X479), CPT6_SOLLC (K7W9N9), CPT7_SOLLC (K4CA50), CRIT_STRCO (Q9ACU1), DDPS1_ARATH (O80458), DDPS2_ARATH (Q56Y11), DDPS3_ARATH (Q8RX73), DDPS4_ARATH (Q8GY03), DDPS5_ARATH (Q570Q8), DDPS6_ARATH (Q8S2T1), DDPS7_ARATH (Q8LED0), DDPS8_ARATH (Q8LAR7), DHDDS_HUMAN (Q86SQ9), DHDDS_MOUSE (Q99KU1), DPDP_THEFY (Q47RM6), DPDS_MYCBO (P60478), DPDS_MYCLE (P38119), DPDS_MYCS2 (A0R0S4), DPDS_MYCTO (P9WFF6), DPDS_MYCTU (P9WFF7), HRT2_HEVBR (Q8W3U4), ISPT1_BRADU (Q89W41), ISPT1_CORDI (P60480), ISPT1_COREF (Q8FQR4), ISPT1_CORGL (P38118), ISPT1_NOSS1 (P58563), ISPT1_STRAW (Q82IC1), ISPT1_STRCO (Q9L2H4), ISPT1_TROW8 (Q83HR7), ISPT1_TROWT (Q83GJ0), ISPT2_BRADU (Q89KP7), ISPT2_CORDI (P60481), ISPT2_COREF (Q8FNG2), ISPT2_CORGL (Q8NNC1), ISPT2_NOSS1 (Q8YRL4), ISPT2_STRAW (Q82BS5), ISPT2_STRCO (Q9XA06), ISPT2_TROW8 (Q83HN8), ISPT2_TROWT (Q83GG2), ISPT_AGRFC (Q8UFL9), ISPT_ALKCK (Q5WFT2), ISPT_AQUAE (O67291), ISPT_AQUPY (Q8GLK9), ISPT_BACAN (Q81WL2), ISPT_BACC1 (Q732P6), ISPT_BACCR (Q819Y1), ISPT_BACHK (Q6HEZ2), ISPT_BACSU (O31751), ISPT_BACTN (Q8A1E0), ISPT_BIFLO (Q8G7Y3), ISPT_BORBR (Q7WJ90), ISPT_BORBU (O51146), ISPT_BORPA (Q7WA56), ISPT_BORPE (Q7VYC6), ISPT_BRUAB (Q57CY1), ISPT_BRUME (Q8YHH3), ISPT_BRUSU (Q8G0D9), ISPT_CALS4 (Q8RA26), ISPT_CAMJE (Q9PP99), ISPT_CAMJR (Q5HUX2), ISPT_CAUVC (Q9A707), ISPT_CHLAB (Q5L6U0), ISPT_CHLCV (Q824H0), ISPT_CHLMU (Q9PJU2), ISPT_CHLPN (Q9Z7Y7), ISPT_CHLTE (Q8KFQ5), ISPT_CHLTR (O84456), ISPT_CHRVO (Q7NVZ0), ISPT_CLOAB (Q97I62), ISPT_CLOPE (Q8XJQ9), ISPT_CLOTE (Q895K8), ISPT_DEIRA (Q9RRP1), ISPT_ENTFA (Q831K9), ISPT_FUSNN (Q8RE08), ISPT_GEOKA (Q5L0J8), ISPT_GEOSL (P60482), ISPT_GLOVI (Q7NPE7), ISPT_HALH5 (Q9KA67), ISPT_HELHP (Q7VH74), ISPT_HELMO (Q8GDY3), ISPT_HELPJ (Q9ZK05), ISPT_HELPY (P55984), ISPT_LACAC (Q5FJM7), ISPT_LACJO (Q74IR9), ISPT_LACLA (Q9CDT1), ISPT_LEPIC (Q72U10), ISPT_LEPIN (Q8F144), ISPT_LISIN (Q92C39), ISPT_LISMF (Q720A7), ISPT_LISMO (Q8Y7G6), ISPT_MYCPF (Q93AU4), ISPT_NEIG1 (Q5F5X2), ISPT_NEIMA (Q9JX35), ISPT_NEIMB (Q9K1G6), ISPT_NITEU (Q82TZ9), ISPT_OCEIH (Q8EQU9), ISPT_PARMW (Q7U7P7), ISPT_PORGI (Q7MXJ4), ISPT_PROMA (Q7VBI9), ISPT_PROMM (Q7V6T7), ISPT_PROMP (Q7V102), ISPT_RALN1 (Q8XZI7), ISPT_RHILO (Q98MB9), ISPT_RHIME (Q92Q51), ISPT_RHOBA (Q7UF53), ISPT_RICBR (Q1RII8), ISPT_RICCN (Q92I30), ISPT_RICFE (Q4ULR6), ISPT_RICPR (Q9ZDA7), ISPT_RICS2 (Q7PBU9), ISPT_RICTY (Q68WV4), ISPT_STAAC (Q5HGH1), ISPT_STAAM (P60476), ISPT_STAAN (P60477), ISPT_STAAR (Q6GHH5), ISPT_STAAS (Q6G9V3), ISPT_STAAW (Q8NWZ5), ISPT_STAEQ (Q5HPT1), ISPT_STAES (Q8CPG7), ISPT_STAHJ (Q4L5W2), ISPT_STAS1 (Q49X45), ISPT_STRA3 (Q8E359), ISPT_STRA5 (Q8DXD5), ISPT_STRFR (P20182), ISPT_STRMU (Q8DSJ7), ISPT_STRP1 (Q99XY1), ISPT_STRP3 (P0DH32), ISPT_STRP6 (Q5X9U4), ISPT_STRP8 (Q8NZB2), ISPT_STRPN (Q97SR4), ISPT_STRPQ (P0DH33), ISPT_STRR6 (Q8DRB3), ISPT_STRT1 (Q5M1N6), ISPT_STRT2 (Q5M677), ISPT_SYNY3 (Q55482), ISPT_THEMA (Q9X1B8), ISPT_THET2 (O87197), ISPT_THET8 (Q5SH15), ISPT_THEVB (Q8DI29), ISPT_TREDE (Q73K76), ISPT_TREPA (O83612), ISPT_TRIV2 (Q9ZEJ7), ISPT_WOLSU (Q7M7V7), ISPT_ZYMMO (Q9X5F1), RER2_YEAST (P35196), SRT1_YEAST (Q03175), UPPS_ACIAD (Q6FCH1), UPPS_AERPE (Q9YC66), UPPS_ALIF1 (Q5E3E3), UPPS_ARCFU (O29049), UPPS_BLOFL (Q7VRE1), UPPS_BUCAI (P57330), UPPS_BUCAP (Q8K9S6), UPPS_BUCBP (Q89AP0), UPPS_COXBU (Q83BV5), UPPS_ECO57 (P60474), UPPS_ECOL6 (P60473), UPPS_ECOLI (P60472), UPPS_FRATT (Q5NHX6), UPPS_HAEDU (Q7VM20), UPPS_HAEIN (P44938), UPPS_HALMA (Q5V1I1), UPPS_HALSA (Q9HP68), UPPS_LACPL (Q88VJ8), UPPS_LEGPA (Q5X7N9), UPPS_LEGPH (Q5ZY69), UPPS_LEGPL (Q5WZ40), UPPS_METAC (Q8TJQ7), UPPS_METJA (Q58767), UPPS_METKA (Q8TXA7), UPPS_METMA (Q8PZ76), UPPS_METTH (O26334), UPPS_MICLU (O82827), UPPS_PASMU (Q9CJL4), UPPS_PECAS (Q6D8D8), UPPS_PHOLL (Q7N8P2), UPPS_PHOPR (Q6LN28), UPPS_PICTO (Q6KZ89), UPPS_PSEAE (Q9HXY2), UPPS_PSEPK (Q88MH6), UPPS_PSESM (Q886N9), UPPS_PYRAB (Q9V157), UPPS_PYRAE (Q8ZU54), UPPS_PYRFU (Q8U0I8), UPPS_PYRHO (O59258), UPPS_SACS2 (Q980W4), UPPS_SALPA (Q5PD68), UPPS_SALTI (Q8Z9A5), UPPS_SALTY (Q8ZRP2), UPPS_SHEON (Q8EGH1), UPPS_SHIFL (P60475), UPPS_SULAC (Q9HH76), UPPS_SULTO (Q976K2), UPPS_THEAC (Q9HKQ0), UPPS_THEKO (Q5JGE1), UPPS_THEVO (Q97B58), UPPS_VIBCH (Q9KPV6), UPPS_VIBPA (Q87ME1), UPPS_VIBVU (Q8DBF7), UPPS_VIBVY (Q7MIG4), UPPS_WIGBR (Q8D2G7), UPPS_XANAC (Q8PMK9), UPPS_XANCP (Q8PAV7), UPPS_XANOR (Q5H1E5), UPPS_XYLFA (Q9PEH8), UPPS_XYLFT (Q87EH7), UPPS_YERPE (Q8ZH61), UPPS_YERPS (Q667J4), YE54_SCHPO (O14171), ZFPP_MYCBO (Q7U0P8), ZFPP_MYCLE (Q9CB36), ZFPP_MYCS2 (A0R2W4), ZFPP_MYCTO (P9WFF4), ZFPP_MYCTU (P9WFF5), ZFPP_THEFY (Q47SS3), ZFPS_SOLHA (B8XA40)» more
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UniProtKB/Swiss-Prot False negative sequences |
4 sequences
NGBR_DANRE (Q6DHR8), NGBR_HUMAN (Q96E22), NGBR_MOUSE (Q99LJ8), RER2_ENCCU (Q8SQJ8)» more |
PDB [Detailed view] |
66 PDB
1F75; 1JP3; 1UEH; 1V7U; 1X06; 1X07; 1X08; 1X09; 2D2R; 2DTN; 2E98; 2E99; 2E9A; 2E9C; 2E9D; 2VFW; 2VG0; 2VG1; 2VG2; 2VG3; 2VG4; 3QAS; 3SGT; 3SGV; 3SGX; 3SH0; 3TH8; 3UGS; 3WYJ; 4H2J; 4H2M; 4H2O; 4H38; 4H3A; 4H3C; 4H8E; 4ONC; 4Q9M; 4Q9O; 4U82; 5CQB; 5CQJ; 5HXN; 5HXO; 5HXP; 5HXQ; 5HXT; 5KH2; 5KH4; 5KH5; 5ZHE; 6IME; 6LOI; 6W2L; 6Z1N; 7CPM; 7CPN; 7JLI; 7JLJ; 7JLM; 7JLR; 7PAX; 7PAY; 7PB0; 7PB1; 7VPC » more |