PROSITE entry PS01094
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General information about the entry
| PURL [info] | https://purl.expasy.org/prosite/signature/PS01094 |
| Entry name [info] | UPF0076 |
| Accession [info] | PS01094 |
| Entry type [info] | PATTERN |
| Date [info] |
01-NOV-1995 CREATED;
01-JUL-1999 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00838 |
Name and characterization of the entry
| Description [info] | Uncharacterized protein family UPF0076 signature. |
| Pattern [info] |
[PA]-[ASTPV]-R-[SACVF]-x-[LIVMFY]-x(2)-[GSAKR]-x-[LMVA]-x(5,8)-[LIVM]- E-[MI]. |
Numerical results [info]
| Total number of hits | 105 in 105 different sequences |
| Number of true positive hits | 85 in 85 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 20 in 20 different sequences |
| Number of false negative sequences | 27 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 80.95 % |
| Recall (true positives / (true positives + false negatives)) | 75.89 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
85 sequences
ALDR_LACLA (O34133), DFRA_MYXXA (O52178), HMF1_YEAST (P40037), MMF1_SCHPO (O43003), MMF1_YEAST (P40185), RIDA_ARATH (Q94JQ4), RIDA_BACSU (P37552), RIDA_BOVIN (Q3T114), RIDA_CAPHI (P80601), RIDA_DERFA (A0A1J1DL12), RIDA_ECOL6 (P0AF94), RIDA_ECOLI (P0AF93), RIDA_HUMAN (P52758), RIDA_MOUSE (P52760), RIDA_PYRFU (Q8U308), RIDA_RAT(P52759), RIDA_SALTY (Q7CP78), RIDA_SHIFL (P0AF95), RUTC_CROS8 (A7ME54), RUTC_CROTZ (C9Y0S5), RUTC_ECO10 (C8U5H2), RUTC_ECO1A (C8UMM6), RUTC_ECO24 (A7ZKB5), RUTC_ECO26 (C8TNC0), RUTC_ECO27 (B7UNZ3), RUTC_ECO44 (D3H123), RUTC_ECO45 (B7MIF7), RUTC_ECO55 (B7LFC0), RUTC_ECO57 (Q8XAU5), RUTC_ECO7I (B7NLB6), RUTC_ECO81 (B7MTF3), RUTC_ECO8A (B7M8Z5), RUTC_ECOBD (C6EHJ7), RUTC_ECOBR (C6UFC1), RUTC_ECOBW (C4ZQD8), RUTC_ECOCB (D3QPK3), RUTC_ECOD1 (C9QZ66), RUTC_ECODH (B1X9D1), RUTC_ECOHS (A7ZYW5), RUTC_ECOK1 (A1A9R5), RUTC_ECOKI (D5CZH0), RUTC_ECOL5 (Q0TJ57), RUTC_ECOL6 (P0AFQ6), RUTC_ECOLC (B1IV87), RUTC_ECOLI (P0AFQ5), RUTC_ECOLU (B7N3G6), RUTC_ECOS5 (D2NGI7), RUTC_ECOSE (B6I986), RUTC_ECOSM (B1LIZ5), RUTC_ECOUT (Q1RDK7), RUTC_ENT38 (A4W923), RUTC_ENTCC (D5CE34), RUTC_KLEP3 (B5XXN2), RUTC_KLEP7 (A6T7A0), RUTC_KLEVT (D3RKL2), RUTC_PANAM (D4GEU6), RUTC_SHIDS (Q32HQ1), RUTC_SHIF2 (D2AC41), RUTC_SHIF8 (Q0T624), RUTC_SHIFL (Q83LK7), RUTC_YERE8 (A1JMX4), TDCF_ECOL6 (P0AGL3), TDCF_ECOLI (P0AGL2), TDCF_SHIFL (P0AGL4), UK114_DROME (Q9V3W0), Y1251_PYRAB (Q9UZA3), Y142_LEUMC (P97117), Y1466_PASMU (Q9L6B5), Y1627_HAEIN (P71394), Y3206_SACS2 (Q97U19), Y322_HAEDU (O30825), Y334_BUCBP (Q89AG0), Y364_AQUAE (O66689), Y4SK_SINFN (P55654), Y709_SYNY3 (P52761), Y719_HAEIN (P44839), Y811_SULTO (Q973T6), Y854_PYRHO (O58584), Y944_HELPJ (Q9ZKQ6), Y944_HELPY (O25598), YOAB_ECOL6 (P0AEB8), YOAB_ECOLI (P0AEB7), YOAB_SHIFL (P0AEB9), YSD2_CAEEL (Q10121), YVN1_AZOVI (P40431)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
27 sequences
DPH6_SCHPO (Q9USQ7), DPH6_YEAST (Q12429), MMF2_SCHPO (Q9UR06), RUTC_ACIAD (Q6FFZ5), RUTC_AGRFC (Q7CWX2), RUTC_AZOC5 (A8IAD2), RUTC_CAUSK (B0SW61), RUTC_CAUST (D5VGV2), RUTC_CAUVC (Q9A4N4), RUTC_CAUVN (B8H1Q2), RUTC_HALO1 (D0LI57), RUTC_METC4 (B7KWT5), RUTC_METEA (C5B0U7), RUTC_METED (C7CM34), RUTC_METEP (A9W3H9), RUTC_METPB (B1ZB17), RUTC_METRJ (B1M5I6), RUTC_PSE14 (Q48MQ6), RUTC_PSEU2 (Q4ZXR9), RUTC_RHIR8 (B9JLT7), RUTC_SERP5 (A8GCT4), RUTC_STUS1 (A4VQH6), RUTC_VARPS (C5CN81), UK114_CHICK (P83145), Y359_BUCAP (Q8K9H7), Y371_BUCAI (P57452), YJGH_ECOLI (P39332)» more |
| UniProtKB/Swiss-Prot False positive sequences |
20 sequences
ATPFD_MYCLB (B8ZR39), ATPFD_MYCLE (P53006), CCL_CHLAA (A9WGE2), CYF_PROM1 (A2C0R8), CYF_PROMT (Q46GW2), PB2_I30A0 (P26113), PB2_I61A1 (B3EUR6), PB2_I67A2 (A8C8X3), PB2_I77AC (P26114), POLS_ABPVR (Q9DSN8), SYE_BIFAA (A0ZZS4), SYE_BIFLD (B3DU87), SYE_BIFLO (Q8G709), SYE_CUTAK (Q6A6M1), SYE_PARS2 (A8LCV4), SYE_STRAW (Q82JR3), SYE_STRGG (B1VZ06), SYE_THEYD (B5YIG1), TRPE2_HALMA (Q5V213), TRPE_HALVD (P33975)» more |
| PDB [Detailed view] |
21 PDB
1J7H; 1JD1; 1NQ3; 1ONI; 1QAH; 1QD9; 1QU9; 1X25; 2DYY; 2UYJ; 2UYK; 2UYN; 2UYP; 3QUW; 3V4D; 5HP7; 5HP8; 8QOK; 8QOP; 8QOS; 8QOV » more |