Home  |  Contact
Entry: PS01106

General information about the entry

Entry name [info] RIBOSOMAL_L18E
Accession [info] PS01106
Entry type [info] PATTERN
Date [info] 01-NOV-1995 CREATED;
01-APR-2006 DATA UPDATE;
12-AUG-2020 INFO UPDATE.
PROSITE Doc. [info] PDOC00850

Name and characterization of the entry

Description [info] Ribosomal protein L18e signature.
Pattern [info] 
[KREWDI]-x-L-x(2)-[PSRG]-[KRS]-x(2)-[RHY]-[PSA]-x-[LIVM]-[NSA]-[LIVM]-x-
[RK]-[LIVM].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2020_04 which contains 563'082 sequence entries.


Total number of hits 47 in 47 different sequences
Number of true positive hits 47 in 47 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 20
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 70.15 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 47 sequences 

RL18A_SCHPO (Q10192    ), RL18A_XENLA (P09897    ), RL18A_YEAST (P0CX49    ), 

RL18B_SCHPO (Q8TFH1    ), RL18B_XENLA (P02412    ), RL18B_YEAST (P0CX50    ), 
RL18E_AERPE (Q9YB51    ), RL18E_HALMA (P12733    ), RL18E_HALS3 (B0R4Y3    ), 
RL18E_HALSA (Q9V2W0    ), RL18E_METAC (Q8TT44    ), RL18E_METJA (P54022    ), 
RL18E_METKA (Q8TVB7    ), RL18E_METMA (Q8PW46    ), RL18E_PICTO (Q6L295    ), 
RL18E_PYRAB (Q9V197    ), RL18E_PYRFU (Q8U0E5    ), RL18E_PYRHO (O59302    ), 
RL18E_SACS2 (P95990    ), RL18E_SULAC (P39474    ), RL18E_SULTO (Q96YW1    ), 
RL18E_THEAC (Q9HL06    ), RL18E_THEKO (Q5JJF5    ), RL18E_THEON (B6YSQ4    ), 
RL18E_THEVO (Q979K3    ), RL18_ANOGA  (Q7QJM5    ), RL18_BOMMO  (Q5UAS1    ), 
RL18_BOVIN  (Q5E973    ), RL18_CANLF  (D0VWQ3    ), RL18_CICAR  (O65729    ), 
RL18_DIACI  (Q0PXY6    ), RL18_DROME  (Q9VS34    ), RL18_DROPS  (Q2M0G4    ), 
RL18_HUMAN  (Q07020    ), RL18_ICTPU  (Q90YV0    ), RL18_MACFA  (Q4R5H8    ), 
RL18_MOUSE  (P35980    ), RL18_OREMO  (P69090    ), RL18_ORENI  (P69091    ), 
RL18_PIG    (Q95342    ), RL18_PLUXY  (Q6F442    ), RL18_RAT    (P12001    ), 
RL18_SALSA  (P24558    ), RL18_SPOFR  (Q962Y8    ), RL18_TAEAS  (A3F4S0    ), 
RL18_TIMBA  (Q4GXG7    ), RL18_TRYB2  (P50885    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 20 sequences 

RL182_ARATH (P42791    ), RL18E_ARCFU (O29138    ), RL18E_METB6 (A7IAH4    ), 

RL18E_METHJ (Q2FTA2    ), RL18E_METMP (Q6LXM7    ), RL18E_METPE (B8GEG4    ), 
RL18E_METTH (O26145    ), RL18E_NANEQ (Q74MB7    ), RL18E_PYRAE (Q8ZYQ2    ), 
RL18_AEDAE  (Q1HR62    ), RL18_CAEBR  (Q60P81    ), RL18_CAEEL  (O45946    ), 
RL18_DICDI  (Q54VZ4    ), RL18_IXOSC  (Q4PM04    ), RL18_LEIMA  (Q4QG98    ), 
RL18_LYSTE  (Q56FG8    ), RL18_TETTH  (P0DJ17    ), RL18_THEAN  (Q4UFD5    ), 
RL18_THEPA  (Q4N438    ), RL18_TRYCC  (Q4DZP2    )
» more

PDB
[Detailed view]		 201 PDB

1FFK; 1JJ2; 1K73; 1K8A; 1K9M; 1KC8; 1KD1; 1KQS; 1M1K; 1M90; 1N8R; 1NJI; 1Q7Y; 1Q81; 1Q82; 1Q86; 1QVF; 1QVG; 1S72; 1VQ4; 1VQ5; 1VQ6; 1VQ7; 1VQ8; 1VQ9; 1VQK; 1VQL; 1VQM; 1VQN; 1VQO; 1VQP; 1W2B; 1YHQ; 1YI2; 1YIJ; 1YIT; 1YJ9; 1YJN; 1YJW; 2OTJ; 2OTL; 2QA4; 2QEX; 3CC2; 3CC4; 3CC7; 3CCE; 3CCJ; 3CCL; 3CCM; 3CCQ; 3CCR; 3CCS; 3CCU; 3CCV; 3CD6; 3CMA; 3CME; 3CPW; 3CXC; 3G4S; 3G6E; 3G71; 3I55; 3I56; 3J6X; 3J6Y; 3J77; 3J78; 3J7O; 3J7P; 3J7Q; 3J7R; 3JCT; 3OW2; 4ADX; 4U3M; 4U3N; 4U3U; 4U4N; 4U4O; 4U4Q; 4U4R; 4U4U; 4U4Y; 4U4Z; 4U50; 4U51; 4U52; 4U53; 4U55; 4U56; 4U6F; 4UG0; 4V4B; 4V4N; 4V5Z; 4V6I; 4V6U; 4V6W; 4V6X; 4V7F; 4V7R; 4V88; 4V8M; 4V8T; 4V8Y; 4V8Z; 4V91; 4V9F; 5AJ0; 5APN; 5APO; 5DAT; 5DC3; 5DGE; 5DGF; 5DGV; 5FCI; 5FCJ; 5FL8; 5GAK; 5H4P; 5I4L; 5JCS; 5JUO; 5JUP; 5JUS; 5JUT; 5JUU; 5LKS; 5LYB; 5M1J; 5MC6; 5MEI; 5NDG; 5NDV; 5NDW; 5OBM; 5ON6; 5T2C; 5T62; 5T6R; 5TBW; 5TGA; 5TGM; 5Z3G; 6C0F; 6CB1; 6EK0; 6ELZ; 6EM1; 6EM3; 6EM4; 6EM5; 6FT6; 6GQ1; 6GQB; 6GQV; 6HD7; 6HHQ; 6I7O; 6IP5; 6IP6; 6IP8; 6N8J; 6N8K; 6N8L; 6N8M; 6N8N; 6N8O; 6OLE; 6OLF; 6OLG; 6OLI; 6OLZ; 6OM0; 6OM7; 6Q8Y; 6QIK; 6QT0; 6QTZ; 6QZP; 6R84; 6R86; 6R87; 6RI5; 6RZZ; 6S05; 6S47; 6SNT; 6SV4; 6T4Q; 6T7I; 6T7T; 6T83; 6TB3; 6TNU; 6Y0G; 6Y2L; 6Y57
» more

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission