PROSITE entry PS01106

View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
PURL: https://purl.expasy.org/prosite/signature/PS01106

Direct ScanProsite submission

General information about the entry

Entry name [info]	RIBOSOMAL_L18E
Accession [info]	PS01106
Entry type [info]	PATTERN
Date [info]	01-NOV-1995 CREATED; 01-APR-2006 DATA UPDATE; 29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC00850

Name and characterization of the entry

Description [info]	Ribosomal protein L18e signature.
Pattern [info]	[KREWDI]-x-L-x(2)-[PSRG]-[KRS]-x(2)-[RHY]-[PSA]-x-[LIVM]-[NSA]-[LIVM]-x- [RK]-[LIVM].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.

Total number of hits	48 in 48 different sequences
Number of true positive hits	48 in 48 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	20
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	70.59 %

Comments [info]

Taxonomic range [info]	Archaea, Eukaryotes
Maximum number of repetitions [info]	1
Version [info]	2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences

48 sequences

RL18A_SCHPO (Q10192), RL18A_XENLA (P09897), RL18A_YEAST (P0CX49),

RL18B_SCHPO (Q8TFH1), RL18B_XENLA (P02412), RL18B_YEAST (P0CX50), 
RL18E_AERPE (Q9YB51), RL18E_HALMA (P12733), RL18E_HALS3 (B0R4Y3), 
RL18E_HALSA (Q9V2W0), RL18E_METAC (Q8TT44), RL18E_METJA (P54022), 
RL18E_METKA (Q8TVB7), RL18E_METMA (Q8PW46), RL18E_PICTO (Q6L295), 
RL18E_PYRAB (Q9V197), RL18E_PYRFU (Q8U0E5), RL18E_PYRHO (O59302), 
RL18E_SACS2 (P95990), RL18E_SULAC (P39474), RL18E_SULTO (Q96YW1), 
RL18E_THEAC (Q9HL06), RL18E_THEKO (Q5JJF5), RL18E_THEON (B6YSQ4), 
RL18E_THEVO (Q979K3), RL18_ANOGA  (Q7QJM5), RL18_BOMMO  (Q5UAS1), 
RL18_BOVIN  (Q5E973), RL18_CANAL  (A0A1D8PK43), RL18_CANLF  (D0VWQ3), 
RL18_CICAR  (O65729), RL18_DIACI  (Q0PXY6), RL18_DROME  (Q9VS34), 
RL18_DROPS  (Q2M0G4), RL18_HUMAN  (Q07020), RL18_ICTPU  (Q90YV0), 
RL18_MACFA  (Q4R5H8), RL18_MOUSE  (P35980), RL18_OREMO  (P69090), 
RL18_ORENI  (P69091), RL18_PIG(Q95342), RL18_PLUXY  (Q6F442), 
RL18_RAT(P12001), RL18_SALSA  (P24558), RL18_SPOFR  (Q962Y8), 
RL18_TAEAS  (A3F4S0), RL18_TIMBA  (Q4GXG7), RL18_TRYB2  (P50885)

» more

Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
[Clustal format, color, condensed view] [Clustal format, color]
[Clustal format, plain text] [Fasta format]
Retrieve the sequence logo from the alignment

UniProtKB/Swiss-Prot
False negative sequences

20 sequences

RL182_ARATH (P42791), RL18E_ARCFU (O29138), RL18E_METB6 (A7IAH4),

RL18E_METHJ (Q2FTA2), RL18E_METMP (Q6LXM7), RL18E_METPE (B8GEG4), 
RL18E_METTH (O26145), RL18E_NANEQ (Q74MB7), RL18E_PYRAE (Q8ZYQ2), 
RL18_AEDAE  (Q1HR62), RL18_CAEBR  (Q60P81), RL18_CAEEL  (O45946), 
RL18_DICDI  (Q54VZ4), RL18_IXOSC  (Q4PM04), RL18_LEIMA  (Q4QG98), 
RL18_LYSTE  (Q56FG8), RL18_TETTH  (P0DJ17), RL18_THEAN  (Q4UFD5), 
RL18_THEPA  (Q4N438), RL18_TRYCC  (Q4DZP2)

» more

PDB
[Detailed view]

448 PDB

pdb_00001ffk; pdb_00001jj2; pdb_00001k73; pdb_00001k8a; pdb_00001k9m; pdb_00001kc8; pdb_00001kd1; pdb_00001kqs; pdb_00001m1k; pdb_00001m90; pdb_00001n8r; pdb_00001nji; pdb_00001q7y; pdb_00001q81; pdb_00001q82; pdb_00001q86; pdb_00001qvf; pdb_00001qvg; pdb_00001s72; pdb_00001vq4; pdb_00001vq5; pdb_00001vq6; pdb_00001vq7; pdb_00001vq8; pdb_00001vq9; pdb_00001vqk; pdb_00001vql; pdb_00001vqm; pdb_00001vqn; pdb_00001vqo; pdb_00001vqp; pdb_00001w2b; pdb_00001yhq; pdb_00001yi2; pdb_00001yij; pdb_00001yit; pdb_00001yj9; pdb_00001yjn; pdb_00001yjw; pdb_00002otj; pdb_00002otl; pdb_00002qa4; pdb_00002qex; pdb_00003cc2; pdb_00003cc4; pdb_00003cc7; pdb_00003cce; pdb_00003ccj; pdb_00003ccl; pdb_00003ccm; pdb_00003ccq; pdb_00003ccr; pdb_00003ccs; pdb_00003ccu; pdb_00003ccv; pdb_00003cd6; pdb_00003cma; pdb_00003cme; pdb_00003cpw; pdb_00003cxc; pdb_00003g4s; pdb_00003g6e; pdb_00003g71; pdb_00003i55; pdb_00003i56; pdb_00003j6x; pdb_00003j6y; pdb_00003j77; pdb_00003j78; pdb_00003j7o; pdb_00003j7p; pdb_00003j7q; pdb_00003j7r; pdb_00003jct; pdb_00003ow2; pdb_00004adx; pdb_00004u3m; pdb_00004u3n; pdb_00004u3u; pdb_00004u4n; pdb_00004u4o; pdb_00004u4q; pdb_00004u4r; pdb_00004u4u; pdb_00004u4y; pdb_00004u4z; pdb_00004u50; pdb_00004u51; pdb_00004u52; pdb_00004u53; pdb_00004u55; pdb_00004u56; pdb_00004u6f; pdb_00004ug0; pdb_00004v4b; pdb_00004v4n; pdb_00004v5z; pdb_00004v6i; pdb_00004v6u; pdb_00004v6w; pdb_00004v6x; pdb_00004v7f; pdb_00004v7r; pdb_00004v88; pdb_00004v8m; pdb_00004v8t; pdb_00004v8y; pdb_00004v8z; pdb_00004v91; pdb_00004v9f; pdb_00005aj0; pdb_00005apn; pdb_00005apo; pdb_00005dat; pdb_00005dc3; pdb_00005dge; pdb_00005dgf; pdb_00005dgv; pdb_00005fci; pdb_00005fcj; pdb_00005gak; pdb_00005h4p; pdb_00005i4l; pdb_00005jcs; pdb_00005juo; pdb_00005jup; pdb_00005jus; pdb_00005jut; pdb_00005juu; pdb_00005lks; pdb_00005lyb; pdb_00005m1j; pdb_00005mc6; pdb_00005mei; pdb_00005ndg; pdb_00005ndv; pdb_00005ndw; pdb_00005obm; pdb_00005on6; pdb_00005t2c; pdb_00005t62; pdb_00005t6r; pdb_00005tbw; pdb_00005tga; pdb_00005tgm; pdb_00005z3g; pdb_00006c0f; pdb_00006cb1; pdb_00006elz; pdb_00006em1; pdb_00006em3; pdb_00006em4; pdb_00006em5; pdb_00006ft6; pdb_00006gq1; pdb_00006gqb; pdb_00006gqv; pdb_00006hd7; pdb_00006hhq; pdb_00006i7o; pdb_00006ip5; pdb_00006ip6; pdb_00006ip8; pdb_00006lqm; pdb_00006lsr; pdb_00006lss; pdb_00006lu8; pdb_00006m62; pdb_00006n8j; pdb_00006n8k; pdb_00006n8l; pdb_00006n8m; pdb_00006n8n; pdb_00006n8o; pdb_00006oig; pdb_00006ole; pdb_00006olf; pdb_00006olg; pdb_00006oli; pdb_00006olz; pdb_00006om0; pdb_00006om7; pdb_00006q8y; pdb_00006qik; pdb_00006qt0; pdb_00006qtz; pdb_00006qzp; pdb_00006r84; pdb_00006r86; pdb_00006r87; pdb_00006ri5; pdb_00006rzz; pdb_00006s05; pdb_00006s47; pdb_00006skf; pdb_00006skg; pdb_00006snt; pdb_00006sv4; pdb_00006swa; pdb_00006t4q; pdb_00006t7i; pdb_00006t7t; pdb_00006t83; pdb_00006tb3; pdb_00006th6; pdb_00006tnu; pdb_00006w6l; pdb_00006woo; pdb_00006xa1; pdb_00006xiq; pdb_00006xir; pdb_00006xu6; pdb_00006xu7; pdb_00006xu8; pdb_00006y0g; pdb_00006y2l; pdb_00006y57; pdb_00006y6x; pdb_00006ylg; pdb_00006ylh; pdb_00006ylx; pdb_00006yly; pdb_00006z6j; pdb_00006z6k; pdb_00006z6l; pdb_00006z6m; pdb_00006z6n; pdb_00006zm7; pdb_00006zme; pdb_00006zmi; pdb_00006zmo; pdb_00006zvk; pdb_00007a01; pdb_00007azy; pdb_00007b7d; pdb_00007bhp; pdb_00007bt6; pdb_00007btb; pdb_00007cpu; pdb_00007cpv; pdb_00007f5s; pdb_00007ls1; pdb_00007ls2; pdb_00007mpi; pdb_00007mpj; pdb_00007n8b; pdb_00007nac; pdb_00007nrc; pdb_00007nrd; pdb_00007of1; pdb_00007oh3; pdb_00007ohp; pdb_00007ohq; pdb_00007ohr; pdb_00007ohs; pdb_00007oht; pdb_00007ohu; pdb_00007ohv; pdb_00007ohw; pdb_00007ohx; pdb_00007ohy; pdb_00007ow7; pdb_00007pzy; pdb_00007q08; pdb_00007q0f; pdb_00007q0p; pdb_00007q0r; pdb_00007qgg; pdb_00007qvp; pdb_00007r7a; pdb_00007too; pdb_00007top; pdb_00007u0h; pdb_00007ug6; pdb_00007uoo; pdb_00007uqb; pdb_00007uqz; pdb_00007v08; pdb_00007xnx; pdb_00007xny; pdb_00007z34; pdb_00007zpq; pdb_00007zrs; pdb_00007zs5; pdb_00007zuw; pdb_00007zux; pdb_00007zw0; pdb_00008a3d; pdb_00008aaf; pdb_00008agt; pdb_00008agu; pdb_00008agv; pdb_00008agw; pdb_00008agx; pdb_00008agz; pdb_00008bip; pdb_00008bjq; pdb_00008bn3; pdb_00008bqd; pdb_00008bqx; pdb_00008c3a; pdb_00008ccs; pdb_00008cdl; pdb_00008cdr; pdb_00008ceh; pdb_00008cf5; pdb_00008cg8; pdb_00008cgn; pdb_00008civ; pdb_00008cku; pdb_00008cmj; pdb_00008e5t; pdb_00008esq; pdb_00008esr; pdb_00008etc; pdb_00008etg; pdb_00008eth; pdb_00008eti; pdb_00008etj; pdb_00008eub; pdb_00008eug; pdb_00008eui; pdb_00008eup; pdb_00008euy; pdb_00008ev3; pdb_00008evp; pdb_00008evq; pdb_00008evr; pdb_00008evs; pdb_00008evt; pdb_00008ewb; pdb_00008ewc; pdb_00008fkp; pdb_00008fkq; pdb_00008fkr; pdb_00008fks; pdb_00008fkt; pdb_00008fku; pdb_00008fkv; pdb_00008fkw; pdb_00008fkx; pdb_00008fky; pdb_00008fkz; pdb_00008fl0; pdb_00008fl2; pdb_00008fl3; pdb_00008fl4; pdb_00008fl6; pdb_00008fl7; pdb_00008fl9; pdb_00008fla; pdb_00008flb; pdb_00008flc; pdb_00008fld; pdb_00008fle; pdb_00008flf; pdb_00008g5y; pdb_00008g5z; pdb_00008g60; pdb_00008g61; pdb_00008g6j; pdb_00008glp; pdb_00008hfr; pdb_00008hku; pdb_00008hkv; pdb_00008hky; pdb_00008hkz; pdb_00008hl1; pdb_00008hl2; pdb_00008hl3; pdb_00008hl4; pdb_00008hl5; pdb_00008idt; pdb_00008idy; pdb_00008ie3; pdb_00008ifd; pdb_00008ife; pdb_00008ine; pdb_00008inf; pdb_00008ink; pdb_00008ipd; pdb_00008ipx; pdb_00008ipy; pdb_00008ir1; pdb_00008ir3; pdb_00008jdj; pdb_00008jdk; pdb_00008jdl; pdb_00008jdm; pdb_00008k2c; pdb_00008k2d; pdb_00008k82; pdb_00008ogj; pdb_00008oh6; pdb_00008ohd; pdb_00008oi5; pdb_00008oj0; pdb_00008oj3; pdb_00008oj5; pdb_00008oj8; pdb_00008ova; pdb_00008ove; pdb_00008p4v; pdb_00008p8m; pdb_00008p8n; pdb_00008p8u; pdb_00008p9a; pdb_00008pfr; pdb_00008qfd; pdb_00008qoi; pdb_00008qyx; pdb_00008rl2; pdb_00008t2x; pdb_00008t2y; pdb_00008t2z; pdb_00008t30; pdb_00008t3a; pdb_00008t3b; pdb_00008t3c; pdb_00008t3d; pdb_00008t3e; pdb_00008t3f; pdb_00008ukb; pdb_00008ut0; pdb_00008uti; pdb_00008v83; pdb_00008v84; pdb_00008v87; pdb_00008xsx; pdb_00008xsy; pdb_00008xsz; pdb_00008xu8; pdb_00008y0u; pdb_00008y0w; pdb_00008y0x; pdb_00008yld; pdb_00008ylr; pdb_00008yoo; pdb_00008yop; pdb_00008z70; pdb_00008z71; pdb_00009axt; pdb_00009axu; pdb_00009axv; pdb_00009c3h; pdb_00009f9s; pdb_00009g8m; pdb_00009gmo
» more