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PROSITE entry PS01111


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PURL: https://purl.expasy.org/prosite/signature/PS01111

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General information about the entry

Entry name [info] RNA_POL_K_14KD
Accession [info] PS01111
Entry type [info] PATTERN
Date [info] 01-NOV-1995 CREATED;
01-NOV-1997 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00855

Name and characterization of the entry

Description [info] RNA polymerases K / 14 to 18 Kd subunits signature.
Pattern [info] 
[ST]-x-[FY]-E-x-[AT]-R-x-[LIVM]-[GSA]-x-R-[SA]-x-Q.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 48 in 48 different sequences
Number of true positive hits 48 in 48 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 97.96 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Eukaryotic viruses
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 48 sequences 

RPAB2_BOVIN (Q32PE0), RPAB2_CAEBR (A8WSV7), RPAB2_CAEEL (Q17684), 

RPAB2_CRIGR (P61217), RPAB2_DICDI (Q54FA8), RPAB2_DROME (Q24320), 
RPAB2_HUMAN (P61218), RPAB2_MOUSE (P61219), RPAB2_PONAB (Q5R592), 
RPAB2_RAT   (O88828), RPAB2_SCHPO (P36595), RPAB2_YEAST (P20435), 
RPB6B_ARATH (Q9SJ96), RPB6_ASFB7  (P42484), RPB6_ASFK5  (P0C9D9), 
RPB6_ASFM2  (P0C9D6), RPB6_ASFP4  (P0C9D7), RPB6_ASFWA  (P0C9D8), 
RPD6A_ARATH (Q9FJ98), RPO6_AERPE  (Q9YDJ9), RPO6_ARCFU  (O29134), 
RPO6_HALMA  (P29200), RPO6_HALS3  (B0R4Y7), RPO6_HALSA  (Q9HQJ0), 
RPO6_METAC  (Q8TT40), RPO6_METJA  (Q57650), RPO6_METLZ  (A2SSV2), 
RPO6_METMA  (Q8PW42), RPO6_METTH  (O26148), RPO6_METTP  (A0B6E6), 
RPO6_PICTO  (Q6L1M4), RPO6_PYRAB  (P62014), RPO6_PYRAE  (Q8ZTF9), 
RPO6_PYRFU  (Q8U0E8), RPO6_PYRHO  (P62015), RPO6_SACI3  (C3N5H2), 
RPO6_SACI4  (C3MUV8), RPO6_SACI6  (C4KH38), RPO6_SACS2  (Q97ZJ9), 
RPO6_SACSH  (B8YB61), RPO6_SULAC  (P39463), RPO6_SULTO  (Q972B1), 
RPO6_THEAC  (Q9HJ14), RPO6_THEGJ  (C5A244), RPO6_THEKO  (Q5JJD0), 
RPO6_THEON  (B6YSQ8), RPO6_THEPD  (A1RWX0), RPO6_THEVO  (P58232)
» more

UniProtKB/Swiss-Prot
False negative sequences		 1 sequence 

RPO6_HALLT  (B9LPW5)


				
	

	

		PDB
[Detailed view]		
		
			357 PDB
			


			pdb_00001i3q; pdb_00001i50; pdb_00001i6h; pdb_00001k83; pdb_00001nik; pdb_00001nt9; pdb_00001pqv; pdb_00001qkl; pdb_00001r5u; pdb_00001r9s; pdb_00001r9t; pdb_00001sfo; 
			
				pdb_00001twa; pdb_00001twc; pdb_00001twf; pdb_00001twg; pdb_00001twh; pdb_00001wcm; pdb_00001y1v; pdb_00001y1w; pdb_00001y1y; pdb_00001y77; pdb_00002b63; pdb_00002b8k; 
				pdb_00002e2h; pdb_00002e2i; pdb_00002e2j; pdb_00002ja5; pdb_00002ja6; pdb_00002ja7; pdb_00002ja8; pdb_00002nvq; pdb_00002nvt; pdb_00002nvx; pdb_00002nvy; pdb_00002nvz; 
				pdb_00002pmz; pdb_00002r7z; pdb_00002r92; pdb_00002r93; pdb_00002vum; pdb_00002waq; pdb_00002wb1; pdb_00002y0s; pdb_00002yu9; pdb_00003cqz; pdb_00003fki; pdb_00003gtg; 
				pdb_00003gtj; pdb_00003gtk; pdb_00003gtl; pdb_00003gtm; pdb_00003gto; pdb_00003gtp; pdb_00003gtq; pdb_00003h0g; pdb_00003h3v; pdb_00003hkz; pdb_00003hou; pdb_00003hov; 
				pdb_00003how; pdb_00003hox; pdb_00003hoy; pdb_00003hoz; pdb_00003i4m; pdb_00003i4n; pdb_00003j0k; pdb_00003j1n; pdb_00003k1f; pdb_00003k7a; pdb_00003m3y; pdb_00003m4o; 
				pdb_00003po2; pdb_00003po3; pdb_00003qt1; pdb_00003rzd; pdb_00003rzo; pdb_00003s14; pdb_00003s15; pdb_00003s16; pdb_00003s17; pdb_00003s1m; pdb_00003s1n; pdb_00003s1q; 
				pdb_00003s1r; pdb_00003s2d; pdb_00003s2h; pdb_00004a3b; pdb_00004a3c; pdb_00004a3d; pdb_00004a3e; pdb_00004a3f; pdb_00004a3g; pdb_00004a3i; pdb_00004a3j; pdb_00004a3k; 
				pdb_00004a3l; pdb_00004a3m; pdb_00004a93; pdb_00004ayb; pdb_00004bbr; pdb_00004bbs; pdb_00004bxx; pdb_00004bxz; pdb_00004by1; pdb_00004by7; pdb_00004c2m; pdb_00004c3h; 
				pdb_00004c3i; pdb_00004c3j; pdb_00004qiw; pdb_00004v1m; pdb_00004v1n; pdb_00004v1o; pdb_00004v8s; pdb_00004x67; pdb_00004x6a; pdb_00004y52; pdb_00004y7n; pdb_00004ym7; 
				pdb_00005c3e; pdb_00005c44; pdb_00005c4a; pdb_00005c4j; pdb_00005c4x; pdb_00005fj8; pdb_00005fj9; pdb_00005fja; pdb_00005flm; pdb_00005fmf; pdb_00005fyw; pdb_00005fz5; 
				pdb_00005g5l; pdb_00005ip7; pdb_00005ip9; pdb_00005iy6; pdb_00005iy7; pdb_00005iy8; pdb_00005iy9; pdb_00005iya; pdb_00005iyb; pdb_00005iyc; pdb_00005iyd; pdb_00005lmx; 
				pdb_00005m3f; pdb_00005m3m; pdb_00005m5w; pdb_00005m5x; pdb_00005m5y; pdb_00005m64; pdb_00005n5y; pdb_00005n5z; pdb_00005n60; pdb_00005n61; pdb_00005oa1; pdb_00005oik; 
				pdb_00005oqj; pdb_00005oqm; pdb_00005ot2; pdb_00005sva; pdb_00005u0s; pdb_00005u5q; pdb_00005vvr; pdb_00005vvs; pdb_00005w4u; pdb_00005w51; pdb_00005w5y; pdb_00005w64; 
				pdb_00005w65; pdb_00005w66; pdb_00006blo; pdb_00006blp; pdb_00006bm2; pdb_00006bm4; pdb_00006bqf; pdb_00006cnb; pdb_00006cnc; pdb_00006cnd; pdb_00006cnf; pdb_00006drd; 
				pdb_00006eu0; pdb_00006eu1; pdb_00006eu2; pdb_00006eu3; pdb_00006f40; pdb_00006f41; pdb_00006f42; pdb_00006f44; pdb_00006gyk; pdb_00006gyl; pdb_00006gym; pdb_00006h67; 
				pdb_00006h68; pdb_00006hko; pdb_00006hlq; pdb_00006hlr; pdb_00006hls; pdb_00006i84; pdb_00006kf3; pdb_00006kf4; pdb_00006kf9; pdb_00006o6c; pdb_00006o9l; pdb_00006rqh; 
				pdb_00006rql; pdb_00006rqt; pdb_00006rrd; pdb_00006rui; pdb_00006ruo; pdb_00006rwe; pdb_00006tps; pdb_00006tut; pdb_00006upx; pdb_00006upy; pdb_00006upz; pdb_00006uq0; 
				pdb_00006uq1; pdb_00006uq2; pdb_00006uq3; pdb_00006xre; pdb_00007a6h; pdb_00007ae1; pdb_00007ae3; pdb_00007aea; pdb_00007aoc; pdb_00007aod; pdb_00007aoe; pdb_00007ast; 
				pdb_00007d58; pdb_00007d59; pdb_00007dn3; pdb_00007dth; pdb_00007dti; pdb_00007du2; pdb_00007eu0; pdb_00007eu1; pdb_00007fji; pdb_00007fjj; pdb_00007ked; pdb_00007kee; 
				pdb_00007kef; pdb_00007lbm; pdb_00007mei; pdb_00007mk9; pdb_00007mka; pdb_00007ml0; pdb_00007ml1; pdb_00007ml2; pdb_00007ml4; pdb_00007nkx; pdb_00007nky; pdb_00007o4i; 
				pdb_00007o4j; pdb_00007o4k; pdb_00007o4l; pdb_00007o72; pdb_00007o73; pdb_00007o75; pdb_00007ob9; pdb_00007oba; pdb_00007obb; pdb_00007ok0; pdb_00007oq4; pdb_00007oqy; 
				pdb_00007rim; pdb_00007rip; pdb_00007riq; pdb_00007riw; pdb_00007rix; pdb_00007riy; pdb_00007ui9; pdb_00007uif; pdb_00007uio; pdb_00007vba; pdb_00007vbb; pdb_00007vbc; 
				pdb_00007z0h; pdb_00007z1l; pdb_00007z1m; pdb_00007z1n; pdb_00007z1o; pdb_00007z2z; pdb_00007z30; pdb_00007z31; pdb_00007zs9; pdb_00007zsa; pdb_00007zsb; pdb_00008a43; 
				pdb_00008bws; pdb_00008cen; pdb_00008ceo; pdb_00008cro; pdb_00008hyj; pdb_00008ity; pdb_00008iue; pdb_00008iuh; pdb_00008jch; pdb_00008k5p; pdb_00008oki; pdb_00008orq; 
				pdb_00008p2i; pdb_00008q3b; pdb_00008q3k; pdb_00008qsz; pdb_00008ram; pdb_00008rap; pdb_00008rbo; pdb_00008tug; pdb_00008tvp; pdb_00008tvq; pdb_00008tvs; pdb_00008tvv; 
				pdb_00008tvw; pdb_00008tvx; pdb_00008tvy; pdb_00008u9r; pdb_00008u9x; pdb_00008ukq; pdb_00008ukr; pdb_00008uks; pdb_00008ukt; pdb_00008uku; pdb_00008umh; pdb_00008umi; 
				pdb_00008uoq; pdb_00008uot; pdb_00008xmb; pdb_00008xmc; pdb_00008xmd; pdb_00008xme; pdb_00008xx4; pdb_00008xx5; pdb_00008xxp; pdb_00008xxt; pdb_00008xy6; pdb_00008y0e; 
				pdb_00008yqt; pdb_00008yqu; pdb_00008yqv; pdb_00008yqw; pdb_00008yqy; pdb_00008yqz; pdb_00009bct; pdb_00009bcu; pdb_00009bvt; pdb_00009bw0; pdb_00009ehz; pdb_00009ei1; 
				pdb_00009ei3; pdb_00009ei4; pdb_00009fso; pdb_00009fsp; pdb_00009fsq; pdb_00009fsr; pdb_00009fss; pdb_00009ja1; pdb_00009mu9
			
			

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