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PROSITE entry PS01112


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PURL: https://purl.expasy.org/prosite/signature/PS01112

Direct ScanProsite submission
General information about the entry

Entry name [info] RNA_POL_N_8KD
Accession [info] PS01112
Entry type [info] PATTERN
Date [info] 01-NOV-1995 CREATED;
01-MAR-2002 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00856

Name and characterization of the entry

Description [info] RNA polymerases N / 8 Kd subunits signature.
Pattern [info] 
[LIVMFD]-[LIVMFP]-P-[LIVM]-x-C-[FL]-[ST]-C-G.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 74 in 74 different sequences
Number of true positive hits 74 in 74 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 98.67 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Eukaryotic viruses
Maximum number of repetitions [info] 1
Site [info] zinc at position 6
Site [info] zinc at position 9
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 74 sequences 

NRPBA_ARATH (Q8LFJ6), RPAB5_BOVIN (Q32P78), RPAB5_BRANA (Q39290), 

RPAB5_CAEBR (A8Y1E9), RPAB5_CAEEL (Q9GR61), RPAB5_CHILA (Q6QN04), 
RPAB5_DICDI (Q55AB6), RPAB5_DROME (Q9VC49), RPAB5_ENCCU (Q8SRS6), 
RPAB5_EREGS (Q75BV8), RPAB5_HUMAN (P62875), RPAB5_MOUSE (P62876), 
RPAB5_SCHPO (O13877), RPAB5_YEAST (P22139), RPB10_ASFB7 (P42488), 
RPB10_ASFK5 (P0C982), RPB10_ASFM2 (P0C980), RPB10_ASFP4 (P0C979), 
RPB10_ASFWA (P0C981), RPBAL_ARATH (Q9SYA6), RPO10_AERPE (Q9YB47), 
RPO10_ARCFU (O29135), RPO10_HALLT (B9LPW4), RPO10_HALMA (P29199), 
RPO10_HALS3 (B0R4Y6), RPO10_HALSA (Q9HQJ1), RPO10_HALWD (Q18G60), 
RPO10_HYPBU (A2BK83), RPO10_METAC (Q8TT41), RPO10_METAR (Q0W8C7), 
RPO10_METB6 (A7IAH1), RPO10_METBF (Q46CK8), RPO10_METBU (Q12TI4), 
RPO10_METHJ (Q2FTN7), RPO10_METJA (Q57649), RPO10_METKA (Q8TVB4), 
RPO10_METLZ (A2SSV3), RPO10_METM5 (A4FWK8), RPO10_METM6 (A9A9Y7), 
RPO10_METM7 (A6VGR3), RPO10_METMA (Q8PW43), RPO10_METMJ (A3CWI3), 
RPO10_METMP (Q6LXM4), RPO10_METPE (B8GEG1), RPO10_METS5 (A4YIM8), 
RPO10_METTH (O26147), RPO10_METTP (A0B6E7), RPO10_METVS (A6UPX1), 
RPO10_NANEQ (Q74MB5), RPO10_NATPD (Q3IQT2), RPO10_PICTO (Q6L292), 
RPO10_PYRAB (P60291), RPO10_PYRAE (Q8ZYP9), RPO10_PYRAR (A4WNA8), 
RPO10_PYRCJ (A3MXZ9), RPO10_PYRFU (P60292), RPO10_PYRHO (O59298), 
RPO10_PYRIL (A1RSD9), RPO10_PYRNV (B1YC34), RPO10_SACI1 (C3NMP6), 
RPO10_SACI2 (C3MJQ1), RPO10_SACI3 (C3N058), RPO10_SACI4 (C3MZ09), 
RPO10_SACI6 (C4KJ97), RPO10_SACI7 (C3N8S2), RPO10_SACS2 (Q980Z8), 
RPO10_SACSH (B8YB63), RPO10_STAMF (A3DMR0), RPO10_SULAC (P39472), 
RPO10_SULTO (Q96YW4), RPO10_THEAC (Q9HL09), RPO10_THEKO (Q5JJC9), 
RPO10_THEON (B6YSQ7), RPO10_THEVO (Q979K0)
» more

UniProtKB/Swiss-Prot
False negative sequences		 1 sequence 

RPO10_CALMQ (A8M9S4)


				
	

	

		PDB
[Detailed view]		
		
			351 PDB
			


			pdb_00001ef4; pdb_00001i3q; pdb_00001i50; pdb_00001i6h; pdb_00001k83; pdb_00001nik; pdb_00001nt9; pdb_00001pqv; pdb_00001r5u; pdb_00001r9s; pdb_00001r9t; pdb_00001sfo; 
			
				pdb_00001twa; pdb_00001twc; pdb_00001twf; pdb_00001twg; pdb_00001twh; pdb_00001wcm; pdb_00001y1v; pdb_00001y1w; pdb_00001y1y; pdb_00001y77; pdb_00002b63; pdb_00002b8k; 
				pdb_00002e2h; pdb_00002e2i; pdb_00002e2j; pdb_00002ja5; pdb_00002ja6; pdb_00002ja7; pdb_00002ja8; pdb_00002nvq; pdb_00002nvt; pdb_00002nvx; pdb_00002nvy; pdb_00002nvz; 
				pdb_00002pmz; pdb_00002r7z; pdb_00002r92; pdb_00002r93; pdb_00002vum; pdb_00002waq; pdb_00002wb1; pdb_00002y0s; pdb_00002yu9; pdb_00003cqz; pdb_00003fki; pdb_00003gtg; 
				pdb_00003gtj; pdb_00003gtk; pdb_00003gtl; pdb_00003gtm; pdb_00003gto; pdb_00003gtp; pdb_00003gtq; pdb_00003h0g; pdb_00003h3v; pdb_00003hkz; pdb_00003hou; pdb_00003hov; 
				pdb_00003how; pdb_00003hox; pdb_00003hoy; pdb_00003hoz; pdb_00003i4m; pdb_00003i4n; pdb_00003j0k; pdb_00003j1n; pdb_00003k1f; pdb_00003k7a; pdb_00003m3y; pdb_00003m4o; 
				pdb_00003po2; pdb_00003po3; pdb_00003qt1; pdb_00003rzd; pdb_00003rzo; pdb_00003s14; pdb_00003s15; pdb_00003s16; pdb_00003s17; pdb_00003s1m; pdb_00003s1n; pdb_00003s1q; 
				pdb_00003s1r; pdb_00003s2d; pdb_00003s2h; pdb_00004a3b; pdb_00004a3c; pdb_00004a3d; pdb_00004a3e; pdb_00004a3f; pdb_00004a3g; pdb_00004a3i; pdb_00004a3j; pdb_00004a3k; 
				pdb_00004a3l; pdb_00004a3m; pdb_00004a93; pdb_00004ayb; pdb_00004bbr; pdb_00004bbs; pdb_00004bxx; pdb_00004bxz; pdb_00004by1; pdb_00004by7; pdb_00004c2m; pdb_00004c3h; 
				pdb_00004c3i; pdb_00004c3j; pdb_00004qiw; pdb_00004v1m; pdb_00004v1n; pdb_00004v1o; pdb_00004v8s; pdb_00004x67; pdb_00004x6a; pdb_00004y52; pdb_00004y7n; pdb_00004ym7; 
				pdb_00005c3e; pdb_00005c44; pdb_00005c4a; pdb_00005c4j; pdb_00005c4x; pdb_00005fj8; pdb_00005fj9; pdb_00005fja; pdb_00005flm; pdb_00005fmf; pdb_00005fyw; pdb_00005fz5; 
				pdb_00005g5l; pdb_00005ip7; pdb_00005ip9; pdb_00005iy6; pdb_00005iy7; pdb_00005iy8; pdb_00005iy9; pdb_00005iya; pdb_00005iyb; pdb_00005iyc; pdb_00005iyd; pdb_00005lmx; 
				pdb_00005m3f; pdb_00005m3m; pdb_00005m5w; pdb_00005m5x; pdb_00005m5y; pdb_00005m64; pdb_00005n5y; pdb_00005n5z; pdb_00005n60; pdb_00005n61; pdb_00005oa1; pdb_00005oik; 
				pdb_00005oqj; pdb_00005oqm; pdb_00005ot2; pdb_00005sva; pdb_00005u0s; pdb_00005u5q; pdb_00005vvr; pdb_00005vvs; pdb_00005w4u; pdb_00005w51; pdb_00005w5y; pdb_00005w64; 
				pdb_00005w65; pdb_00005w66; pdb_00006blo; pdb_00006blp; pdb_00006bm2; pdb_00006bm4; pdb_00006bqf; pdb_00006cnb; pdb_00006cnc; pdb_00006cnd; pdb_00006cnf; pdb_00006drd; 
				pdb_00006eu0; pdb_00006eu1; pdb_00006eu2; pdb_00006eu3; pdb_00006f40; pdb_00006f41; pdb_00006f42; pdb_00006f44; pdb_00006gyk; pdb_00006gyl; pdb_00006gym; pdb_00006h67; 
				pdb_00006h68; pdb_00006hko; pdb_00006hlq; pdb_00006hlr; pdb_00006hls; pdb_00006i84; pdb_00006kf3; pdb_00006kf4; pdb_00006kf9; pdb_00006o6c; pdb_00006o9l; pdb_00006rqh; 
				pdb_00006rql; pdb_00006rqt; pdb_00006rrd; pdb_00006rui; pdb_00006ruo; pdb_00006rwe; pdb_00006tps; pdb_00006tut; pdb_00006upx; pdb_00006upy; pdb_00006upz; pdb_00006uq0; 
				pdb_00006uq1; pdb_00006uq2; pdb_00006uq3; pdb_00006xre; pdb_00007a6h; pdb_00007ae1; pdb_00007ae3; pdb_00007aea; pdb_00007aoc; pdb_00007aod; pdb_00007aoe; pdb_00007ast; 
				pdb_00007d58; pdb_00007d59; pdb_00007dn3; pdb_00007du2; pdb_00007eu0; pdb_00007eu1; pdb_00007fji; pdb_00007fjj; pdb_00007ked; pdb_00007kee; pdb_00007kef; pdb_00007lbm; 
				pdb_00007mei; pdb_00007mk9; pdb_00007mka; pdb_00007ml0; pdb_00007ml1; pdb_00007ml2; pdb_00007ml4; pdb_00007nkx; pdb_00007nky; pdb_00007o4i; pdb_00007o4j; pdb_00007o72; 
				pdb_00007o73; pdb_00007o75; pdb_00007ob9; pdb_00007oba; pdb_00007obb; pdb_00007ok0; pdb_00007oq4; pdb_00007oqy; pdb_00007rim; pdb_00007rip; pdb_00007riq; pdb_00007riw; 
				pdb_00007rix; pdb_00007riy; pdb_00007ui9; pdb_00007uif; pdb_00007uio; pdb_00007vba; pdb_00007vbb; pdb_00007vbc; pdb_00007z0h; pdb_00007z1l; pdb_00007z1m; pdb_00007z1n; 
				pdb_00007z1o; pdb_00007z2z; pdb_00007z30; pdb_00007z31; pdb_00007zs9; pdb_00007zsa; pdb_00007zsb; pdb_00008a43; pdb_00008bws; pdb_00008cen; pdb_00008ceo; pdb_00008cro; 
				pdb_00008hyj; pdb_00008ity; pdb_00008iue; pdb_00008iuh; pdb_00008jch; pdb_00008k5p; pdb_00008oki; pdb_00008orq; pdb_00008p2i; pdb_00008q3b; pdb_00008q3k; pdb_00008qsz; 
				pdb_00008ram; pdb_00008rap; pdb_00008rbo; pdb_00008tug; pdb_00008tvp; pdb_00008tvq; pdb_00008tvs; pdb_00008tvv; pdb_00008tvw; pdb_00008tvx; pdb_00008tvy; pdb_00008ukq; 
				pdb_00008ukr; pdb_00008uks; pdb_00008ukt; pdb_00008uku; pdb_00008umh; pdb_00008umi; pdb_00008uoq; pdb_00008uot; pdb_00008xmb; pdb_00008xmc; pdb_00008xmd; pdb_00008xme; 
				pdb_00008xx4; pdb_00008xx5; pdb_00008xxp; pdb_00008xxt; pdb_00008xy6; pdb_00008y0e; pdb_00008yqt; pdb_00008yqu; pdb_00008yqv; pdb_00008yqw; pdb_00008yqy; pdb_00008yqz; 
				pdb_00009bct; pdb_00009bcu; pdb_00009bvt; pdb_00009bw0; pdb_00009ehz; pdb_00009ei1; pdb_00009ei3; pdb_00009ei4; pdb_00009fso; pdb_00009fsp; pdb_00009fsq; pdb_00009fsr; 
				pdb_00009fss; pdb_00009ja1; pdb_00009mu9
			
			

			» more