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PROSITE entry PS01112


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General information about the entry

Entry name [info] RNA_POL_N_8KD
Accession [info] PS01112
Entry type [info] PATTERN
Date [info] 01-NOV-1995 CREATED;
01-MAR-2002 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00856

Name and characterization of the entry

Description [info] RNA polymerases N / 8 Kd subunits signature.
Pattern [info] 
[LIVMFD]-[LIVMFP]-P-[LIVM]-x-C-[FL]-[ST]-C-G.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_04 which contains 571'864 sequence entries.


Total number of hits 74 in 74 different sequences
Number of true positive hits 74 in 74 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 98.67 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Eukaryotic viruses
Maximum number of repetitions [info] 1
Site [info] zinc at position 6
Site [info] zinc at position 9
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 74 sequences 

NRPBA_ARATH (Q8LFJ6), RPAB5_BOVIN (Q32P78), RPAB5_BRANA (Q39290), 

RPAB5_CAEBR (A8Y1E9), RPAB5_CAEEL (Q9GR61), RPAB5_CHILA (Q6QN04), 
RPAB5_DICDI (Q55AB6), RPAB5_DROME (Q9VC49), RPAB5_ENCCU (Q8SRS6), 
RPAB5_EREGS (Q75BV8), RPAB5_HUMAN (P62875), RPAB5_MOUSE (P62876), 
RPAB5_SCHPO (O13877), RPAB5_YEAST (P22139), RPB10_ASFB7 (P42488), 
RPB10_ASFK5 (P0C982), RPB10_ASFM2 (P0C980), RPB10_ASFP4 (P0C979), 
RPB10_ASFWA (P0C981), RPBAL_ARATH (Q9SYA6), RPO10_AERPE (Q9YB47), 
RPO10_ARCFU (O29135), RPO10_HALLT (B9LPW4), RPO10_HALMA (P29199), 
RPO10_HALS3 (B0R4Y6), RPO10_HALSA (Q9HQJ1), RPO10_HALWD (Q18G60), 
RPO10_HYPBU (A2BK83), RPO10_METAC (Q8TT41), RPO10_METAR (Q0W8C7), 
RPO10_METB6 (A7IAH1), RPO10_METBF (Q46CK8), RPO10_METBU (Q12TI4), 
RPO10_METHJ (Q2FTN7), RPO10_METJA (Q57649), RPO10_METKA (Q8TVB4), 
RPO10_METLZ (A2SSV3), RPO10_METM5 (A4FWK8), RPO10_METM6 (A9A9Y7), 
RPO10_METM7 (A6VGR3), RPO10_METMA (Q8PW43), RPO10_METMJ (A3CWI3), 
RPO10_METMP (Q6LXM4), RPO10_METPE (B8GEG1), RPO10_METS5 (A4YIM8), 
RPO10_METTH (O26147), RPO10_METTP (A0B6E7), RPO10_METVS (A6UPX1), 
RPO10_NANEQ (Q74MB5), RPO10_NATPD (Q3IQT2), RPO10_PICTO (Q6L292), 
RPO10_PYRAB (P60291), RPO10_PYRAE (Q8ZYP9), RPO10_PYRAR (A4WNA8), 
RPO10_PYRCJ (A3MXZ9), RPO10_PYRFU (P60292), RPO10_PYRHO (O59298), 
RPO10_PYRIL (A1RSD9), RPO10_PYRNV (B1YC34), RPO10_SACS2 (Q980Z8), 
RPO10_SACSH (B8YB63), RPO10_STAMF (A3DMR0), RPO10_SULAC (P39472), 
RPO10_SULIA (C3N058), RPO10_SULIK (C4KJ97), RPO10_SULIL (C3MJQ1), 
RPO10_SULIM (C3MZ09), RPO10_SULIN (C3NMP6), RPO10_SULIY (C3N8S2), 
RPO10_SULTO (Q96YW4), RPO10_THEAC (Q9HL09), RPO10_THEKO (Q5JJC9), 
RPO10_THEON (B6YSQ7), RPO10_THEVO (Q979K0)
» more

UniProtKB/Swiss-Prot
False negative sequences		 1 sequence 

RPO10_CALMQ (A8M9S4)


				
	

	

		PDB
[Detailed view]		
		
			300 PDB
			


			1EF4; 1I3Q; 1I50; 1I6H; 1K83; 1NIK; 1NT9; 1PQV; 1R5U; 1R9S; 1R9T; 1SFO; 
			
				1TWA; 1TWC; 1TWF; 1TWG; 1TWH; 1WCM; 1Y1V; 1Y1W; 1Y1Y; 1Y77; 2B63; 2B8K; 
				2E2H; 2E2I; 2E2J; 2JA5; 2JA6; 2JA7; 2JA8; 2NVQ; 2NVT; 2NVX; 2NVY; 2NVZ; 
				2PMZ; 2R7Z; 2R92; 2R93; 2VUM; 2WAQ; 2WB1; 2Y0S; 2YU9; 3CQZ; 3FKI; 3GTG; 
				3GTJ; 3GTK; 3GTL; 3GTM; 3GTO; 3GTP; 3GTQ; 3H0G; 3H3V; 3HKZ; 3HOU; 3HOV; 
				3HOW; 3HOX; 3HOY; 3HOZ; 3I4M; 3I4N; 3J0K; 3J1N; 3K1F; 3K7A; 3M3Y; 3M4O; 
				3PO2; 3PO3; 3QT1; 3RZD; 3RZO; 3S14; 3S15; 3S16; 3S17; 3S1M; 3S1N; 3S1Q; 
				3S1R; 3S2D; 3S2H; 4A3B; 4A3C; 4A3D; 4A3E; 4A3F; 4A3G; 4A3I; 4A3J; 4A3K; 
				4A3L; 4A3M; 4A93; 4AYB; 4BBR; 4BBS; 4BXX; 4BXZ; 4BY1; 4BY7; 4C2M; 4C3H; 
				4C3I; 4C3J; 4QIW; 4V1M; 4V1N; 4V1O; 4V8S; 4X67; 4X6A; 4Y52; 4Y7N; 4YM7; 
				5C3E; 5C44; 5C4A; 5C4J; 5C4X; 5FJ8; 5FJ9; 5FJA; 5FLM; 5FMF; 5FYW; 5FZ5; 
				5G5L; 5IP7; 5IP9; 5IY6; 5IY7; 5IY8; 5IY9; 5IYA; 5IYB; 5IYC; 5IYD; 5LMX; 
				5M3F; 5M3M; 5M5W; 5M5X; 5M5Y; 5M64; 5N5Y; 5N5Z; 5N60; 5N61; 5OA1; 5OIK; 
				5OQJ; 5OQM; 5OT2; 5SVA; 5U0S; 5U5Q; 5VVR; 5VVS; 5W4U; 5W51; 5W5Y; 5W64; 
				5W65; 5W66; 6BLO; 6BLP; 6BM2; 6BM4; 6BQF; 6CNB; 6CNC; 6CND; 6CNF; 6DRD; 
				6EU0; 6EU1; 6EU2; 6EU3; 6F40; 6F41; 6F42; 6F44; 6GYK; 6GYL; 6GYM; 6H67; 
				6H68; 6HKO; 6HLQ; 6HLR; 6HLS; 6I84; 6KF3; 6KF4; 6KF9; 6O6C; 6O9L; 6RQH; 
				6RQL; 6RQT; 6RRD; 6RUI; 6RUO; 6RWE; 6TPS; 6TUT; 6UPX; 6UPY; 6UPZ; 6UQ0; 
				6UQ1; 6UQ2; 6UQ3; 6XRE; 7A6H; 7AE1; 7AE3; 7AEA; 7AOC; 7AOD; 7AOE; 7AST; 
				7D58; 7D59; 7DN3; 7DU2; 7EU0; 7EU1; 7FJI; 7FJJ; 7KED; 7KEE; 7KEF; 7LBM; 
				7MEI; 7MK9; 7MKA; 7ML0; 7ML1; 7ML2; 7ML4; 7NKX; 7NKY; 7O4I; 7O4J; 7O72; 
				7O73; 7O75; 7OB9; 7OBA; 7OBB; 7OK0; 7OQ4; 7OQY; 7RIM; 7RIP; 7RIQ; 7RIW; 
				7RIX; 7RIY; 7UI9; 7UIF; 7UIO; 7VBA; 7VBB; 7VBC; 7Z0H; 7Z1L; 7Z1M; 7Z1N; 
				7Z1O; 7Z2Z; 7Z30; 7Z31; 7ZS9; 7ZSA; 7ZSB; 8A43; 8BWS; 8CEN; 8CEO; 8HYJ; 
				8ITY; 8IUE; 8IUH; 8JCH; 8K5P; 8Q3B; 8Q3K; 8UKQ; 8UKR; 8UKS; 8UKT; 8UKU
			
			

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